RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 COL8A1P27658 744 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 BRS3P32247 399 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 FOLR3P41439 243 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 FBXW4P57775 412 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 DEFB109BQ30KR1 87 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 TIGITQ495A1 244 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 TEX36Q5VZQ5 186 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 C8orf82Q6P1X6 216 aaPredicted RBP4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 SPSB3Q6PJ21 355 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 H1FOOQ8IZA3 346 aaPredicted RBP4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 TCTEX1D1Q8N7M0 179 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 OR52L1Q8NGH7 329 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 MS4A6EQ96DS6 147 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 SEC22AQ96IW7 307 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 OR2J1Q9GZK6 312 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 OR51I2Q9H344 312 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 ZDHHC11Q9H8X9 412 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 ZNF629Q9UEG4 869 aaPredicted RBP4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 POLR1DQ9Y2S0 133 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 SCN2AQ99250 2005 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 TRAV36DV7A0A075B6V5 113 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 A0A1W2PP11 408 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 ZNF587BE7ETH6 402 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 H7C417 338 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 J3KT08 172 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 CCL21O00585 134 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 KLF7O75840 302 aaPredicted RBP4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 AMBPP02760 352 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 DBIP07108 87 aaKnown RBP4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 UCHL1P09936 223 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 ZNF708P17019 499 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 CXCL3P19876 107 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 INPP1P49441 399 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 RPL27P61353 136 aaKnown RBP4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 PPP1CBP62140 327 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 BTG2P78543 158 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 CFHR3Q02985 330 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 P2RY6Q15077 328 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 GAGE13Q4V321 117 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 AWAT1Q58HT5 328 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 C1orf194Q5T5A4 169 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 ZNF730Q6ZMV8 503 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 ZNF793Q6ZN11 406 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 OR10D4PQ8NGN7 298 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 OR10R2Q8NGX6 335 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 MLST8Q9BVC4 326 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 MEPEQ9NQ76 525 aaPredicted RBP4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 WIPI2Q9Y4P8 454 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 FER1L5A0AVI2 2057 aa4.15□□□□□ -1.74
TRAPPC11-208ENST00000511955 TRBV5-7A0A0A0MS05 114 aa4.15□□□□□ -1.74
TRAPPC11-208ENST00000511955 RPL36A-HNRNPH2H7BZ11 118 aa4.15□□□□□ -1.74
TRAPPC11-208ENST00000511955 BUB3O43684 328 aa4.15□□□□□ -1.74
TRAPPC11-208ENST00000511955 NEURL1O76050 574 aa4.15□□□□□ -1.74
TRAPPC11-208ENST00000511955 CLDN1O95832 211 aa4.15□□□□□ -1.74
TRAPPC11-208ENST00000511955 APOA2P02652 100 aa4.15□□□□□ -1.74
TRAPPC11-208ENST00000511955 SLC2A2P11168 524 aaPredicted RBP4.15□□□□□ -1.74
TRAPPC11-208ENST00000511955 ADCYAP1P18509 176 aa4.15□□□□□ -1.74
TRAPPC11-208ENST00000511955 CXCL2P19875 107 aa4.15□□□□□ -1.74
TRAPPC11-208ENST00000511955 OR12D2P58182 307 aa4.15□□□□□ -1.74
TRAPPC11-208ENST00000511955 S100A10P60903 97 aa4.15□□□□□ -1.74
TRAPPC11-208ENST00000511955 RPS27AP62979 156 aaKnown RBP4.15□□□□□ -1.74
TRAPPC11-208ENST00000511955 UBA52P62987 128 aaKnown RBP4.15□□□□□ -1.74
TRAPPC11-208ENST00000511955 RBM39Q14498 530 aaKnown RBP4.15□□□□□ -1.74
TRAPPC11-208ENST00000511955 RHEBQ15382 184 aa4.15□□□□□ -1.74
TRAPPC11-208ENST00000511955 ELAVL1Q15717 326 aaKnown RBP4.15□□□□□ -1.74
TRAPPC11-208ENST00000511955 TMEM69Q5SWH9 247 aa4.15□□□□□ -1.74
TRAPPC11-208ENST00000511955 ZNF684Q5T5D7 378 aa4.15□□□□□ -1.74
TRAPPC11-208ENST00000511955 BCDIN3DQ7Z5W3 292 aaKnown RBP4.15□□□□□ -1.74
TRAPPC11-208ENST00000511955 TGIF2LYQ8IUE0 185 aa4.15□□□□□ -1.74
TRAPPC11-208ENST00000511955 OR2T35Q8NGX2 323 aa4.15□□□□□ -1.74
TRAPPC11-208ENST00000511955 ZNF675Q8TD23 568 aa4.15□□□□□ -1.74
TRAPPC11-208ENST00000511955 TSLPQ969D9 159 aa4.15□□□□□ -1.74
TRAPPC11-208ENST00000511955 SEC11CQ9BY50 192 aa4.15□□□□□ -1.74
TRAPPC11-208ENST00000511955 GTSF1LQ9H1H1 148 aa4.15□□□□□ -1.74
TRAPPC11-208ENST00000511955 OR2D2Q9H210 308 aa4.15□□□□□ -1.74
TRAPPC11-208ENST00000511955 OR51E2Q9H255 320 aa4.15□□□□□ -1.74
TRAPPC11-208ENST00000511955 UQCC1Q9NVA1 299 aa4.15□□□□□ -1.74
TRAPPC11-208ENST00000511955 ORC6Q9Y5N6 252 aa4.15□□□□□ -1.74
TRAPPC11-208ENST00000511955 OR51B2Q9Y5P1 312 aa4.15□□□□□ -1.74
TRAPPC11-208ENST00000511955 V9GYS6 101 aa4.15□□□□□ -1.74
TRAPPC11-208ENST00000511955 RP1L1Q8IWN7 2480 aaPredicted RBP4.15□□□□□ -1.75
TRAPPC11-208ENST00000511955 CCDC88CQ9P219 2028 aa4.15□□□□□ -1.75
TRAPPC11-208ENST00000511955 BORCS7-ASMTA0A0B4J1R7 106 aa4.15□□□□□ -1.75
TRAPPC11-208ENST00000511955 BBIP1A8MTZ0 92 aa4.15□□□□□ -1.75
TRAPPC11-208ENST00000511955 EEF1E1-BLOC1S5C9J1V9 151 aa4.15□□□□□ -1.75
TRAPPC11-208ENST00000511955 G3V3Q6 166 aa4.15□□□□□ -1.75
TRAPPC11-208ENST00000511955 EEF1E1O43324 174 aaKnown RBP4.15□□□□□ -1.75
TRAPPC11-208ENST00000511955 OPN1SWP03999 348 aa4.15□□□□□ -1.75
TRAPPC11-208ENST00000511955 GKN3PP0CG01 181 aa4.15□□□□□ -1.75
TRAPPC11-208ENST00000511955 NTF3P20783 257 aa4.15□□□□□ -1.75
TRAPPC11-208ENST00000511955 CHRNB4P30926 498 aa4.15□□□□□ -1.75
TRAPPC11-208ENST00000511955 LIM2P55344 173 aa4.15□□□□□ -1.75
TRAPPC11-208ENST00000511955 MEF2CQ06413 473 aaPredicted RBP4.15□□□□□ -1.75
TRAPPC11-208ENST00000511955 ARL16Q0P5N6 197 aa4.15□□□□□ -1.75
TRAPPC11-208ENST00000511955 LY6DQ14210 128 aa4.15□□□□□ -1.75
TRAPPC11-208ENST00000511955 LAGE3Q14657 143 aa4.15□□□□□ -1.75
TRAPPC11-208ENST00000511955 RAB35Q15286 201 aa4.15□□□□□ -1.75
TRAPPC11-208ENST00000511955 RNASE12Q5GAN4 147 aaKnown RBP4.15□□□□□ -1.75
TRAPPC11-208ENST00000511955 BCL2L15Q5TBC7 163 aa4.15□□□□□ -1.75
TRAPPC11-208ENST00000511955 GSG1LQ6UXU4 331 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms