RNA–Protein interactions for RNA: ENST00000511496.5

LIMCH1-213, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 3,439 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-213ENST00000511496 K7EP34 96 aa10.19□□□□□ -0.78
LIMCH1-213ENST00000511496 REG1AP05451 166 aa10.19□□□□□ -0.78
LIMCH1-213ENST00000511496 ADH4P08319 380 aa10.19□□□□□ -0.78
LIMCH1-213ENST00000511496 ADH5P11766 374 aa10.19□□□□□ -0.78
LIMCH1-213ENST00000511496 SSC4DQ8WTU2 575 aa10.19□□□□□ -0.78
LIMCH1-213ENST00000511496 PMCHL2Q9BQD1 86 aa10.19□□□□□ -0.78
LIMCH1-213ENST00000511496 ULBP2Q9BZM5 246 aa10.19□□□□□ -0.78
LIMCH1-213ENST00000511496 SPCS1Q9Y6A9 102 aa10.19□□□□□ -0.78
LIMCH1-213ENST00000511496 MED12Q93074 2177 aa10.18□□□□□ -0.78
LIMCH1-213ENST00000511496 CCL15-CCL14A0A0B4J2E2 113 aa10.18□□□□□ -0.78
LIMCH1-213ENST00000511496 SH2D7A6NKC9 451 aaPredicted RBP10.18□□□□□ -0.78
LIMCH1-213ENST00000511496 MT-ATP6P00846 226 aa10.18□□□□□ -0.78
LIMCH1-213ENST00000511496 PSG2P11465 335 aa10.18□□□□□ -0.78
LIMCH1-213ENST00000511496 TFF3Q07654 80 aa10.18□□□□□ -0.78
LIMCH1-213ENST00000511496 MFAP5Q13361 173 aa10.18□□□□□ -0.78
LIMCH1-213ENST00000511496 PSG3Q16557 428 aa10.18□□□□□ -0.78
LIMCH1-213ENST00000511496 LTC4SQ16873 150 aa10.18□□□□□ -0.78
LIMCH1-213ENST00000511496 DEFB110Q30KQ9 67 aa10.18□□□□□ -0.78
LIMCH1-213ENST00000511496 TMEM136Q6ZRR5 245 aa10.18□□□□□ -0.78
LIMCH1-213ENST00000511496 BHLHA15Q7RTS1 189 aaPredicted RBP10.18□□□□□ -0.78
LIMCH1-213ENST00000511496 SCCPDHQ8NBX0 429 aa10.18□□□□□ -0.78
LIMCH1-213ENST00000511496 OR10G3Q8NGC4 313 aa10.18□□□□□ -0.78
LIMCH1-213ENST00000511496 RDH5Q92781 318 aa10.18□□□□□ -0.78
LIMCH1-213ENST00000511496 SPSB1Q96BD6 273 aa10.18□□□□□ -0.78
LIMCH1-213ENST00000511496 PHF7Q9BWX1 381 aaPredicted RBP10.18□□□□□ -0.78
LIMCH1-213ENST00000511496 SERTAD4Q9NUC0 356 aa10.18□□□□□ -0.78
LIMCH1-213ENST00000511496 SEC16AO15027 2179 aa10.18□□□□□ -0.78
LIMCH1-213ENST00000511496 OBSL1O75147 1896 aa10.18□□□□□ -0.78
LIMCH1-213ENST00000511496 K7EN84 100 aa10.18□□□□□ -0.78
LIMCH1-213ENST00000511496 RAC3P60763 192 aa10.18□□□□□ -0.78
LIMCH1-213ENST00000511496 CLDN23Q96B33 292 aa10.18□□□□□ -0.78
LIMCH1-213ENST00000511496 TM4SF19Q96DZ7 209 aa10.18□□□□□ -0.78
LIMCH1-213ENST00000511496 TMEM70Q9BUB7 260 aa10.18□□□□□ -0.78
LIMCH1-213ENST00000511496 C19orf24Q9BVV8 132 aa10.18□□□□□ -0.78
LIMCH1-213ENST00000511496 COMMD5Q9GZQ3 224 aa10.18□□□□□ -0.78
LIMCH1-213ENST00000511496 OR7C1O76099 320 aaPredicted RBP10.17□□□□□ -0.78
LIMCH1-213ENST00000511496 APCSP02743 223 aa10.17□□□□□ -0.78
LIMCH1-213ENST00000511496 CD300EQ496F6 205 aaPredicted RBP10.17□□□□□ -0.78
LIMCH1-213ENST00000511496 IL36GQ9NZH8 169 aa10.17□□□□□ -0.78
LIMCH1-213ENST00000511496 UNC80Q8N2C7 3258 aa10.17□□□□□ -0.78
LIMCH1-213ENST00000511496 PCDH15Q96QU1 1955 aa10.17□□□□□ -0.78
LIMCH1-213ENST00000511496 A0A1W2PPV4 95 aa10.17□□□□□ -0.78
LIMCH1-213ENST00000511496 ISLRO14498 428 aa10.17□□□□□ -0.78
LIMCH1-213ENST00000511496 CLDN14O95500 239 aa10.17□□□□□ -0.78
LIMCH1-213ENST00000511496 SRFP11831 508 aa10.17□□□□□ -0.78
LIMCH1-213ENST00000511496 SLC25A6P12236 298 aa10.17□□□□□ -0.78
LIMCH1-213ENST00000511496 GATA3P23771 443 aa10.17□□□□□ -0.78
LIMCH1-213ENST00000511496 DTX1Q86Y01 620 aa10.17□□□□□ -0.78
LIMCH1-213ENST00000511496 C18orf32Q8TCD1 76 aa10.17□□□□□ -0.78
LIMCH1-213ENST00000511496 PNRC2Q9NPJ4 139 aaKnown RBP10.17□□□□□ -0.78
LIMCH1-213ENST00000511496 TRBV9A0A0B4J1U6 114 aa10.17□□□□□ -0.78
LIMCH1-213ENST00000511496 VSTM5A8MXK1 200 aa10.17□□□□□ -0.78
LIMCH1-213ENST00000511496 HSPB6O14558 160 aa10.17□□□□□ -0.78
LIMCH1-213ENST00000511496 SCTP09683 121 aa10.17□□□□□ -0.78
LIMCH1-213ENST00000511496 HIST1H1EP10412 219 aaKnown RBP10.17□□□□□ -0.78
LIMCH1-213ENST00000511496 HERV-K104P63124 156 aa10.17□□□□□ -0.78
LIMCH1-213ENST00000511496 HIST1H1AQ02539 215 aaPredicted RBP10.17□□□□□ -0.78
LIMCH1-213ENST00000511496 PET117Q6UWS5 81 aa10.17□□□□□ -0.78
LIMCH1-213ENST00000511496 ADAMTSL4Q6UY14 1074 aa10.17□□□□□ -0.78
LIMCH1-213ENST00000511496 TMEM251Q8N6I4 163 aa10.17□□□□□ -0.78
LIMCH1-213ENST00000511496 OR1L1Q8NH94 360 aa10.17□□□□□ -0.78
LIMCH1-213ENST00000511496 FGF14Q92915 247 aa10.17□□□□□ -0.78
LIMCH1-213ENST00000511496 A0A0G2JLM5 398 aa10.16□□□□□ -0.78
LIMCH1-213ENST00000511496 C9orf118A6NHY6 69 aa10.16□□□□□ -0.78
LIMCH1-213ENST00000511496 C2orf70A6NJV1 201 aa10.16□□□□□ -0.78
LIMCH1-213ENST00000511496 EML2O95834 649 aa10.16□□□□□ -0.78
LIMCH1-213ENST00000511496 MT-ND6P03923 174 aa10.16□□□□□ -0.78
LIMCH1-213ENST00000511496 TCTAP57738 103 aa10.16□□□□□ -0.78
LIMCH1-213ENST00000511496 OR1D5P58170 312 aa10.16□□□□□ -0.78
LIMCH1-213ENST00000511496 TBR1Q16650 682 aa10.16□□□□□ -0.78
LIMCH1-213ENST00000511496 FNDC7Q5VTL7 733 aa10.16□□□□□ -0.78
LIMCH1-213ENST00000511496 Q6ZPA2 131 aa10.16□□□□□ -0.78
LIMCH1-213ENST00000511496 KCNK17Q96T54 332 aa10.16□□□□□ -0.78
LIMCH1-213ENST00000511496 ZFYVE21Q9BQ24 234 aa10.16□□□□□ -0.78
LIMCH1-213ENST00000511496 TECRQ9NZ01 308 aaKnown RBP10.16□□□□□ -0.78
LIMCH1-213ENST00000511496 HEATR1Q9H583 2144 aaKnown RBP10.16□□□□□ -0.78
LIMCH1-213ENST00000511496 ZNF407Q9C0G0 2248 aa10.16□□□□□ -0.78
LIMCH1-213ENST00000511496 MS4A18H0YCH9 400 aa10.16□□□□□ -0.78
LIMCH1-213ENST00000511496 MALLQ13021 153 aa10.16□□□□□ -0.78
LIMCH1-213ENST00000511496 GPM6BQ13491 265 aa10.16□□□□□ -0.78
LIMCH1-213ENST00000511496 MS4A18Q3C1V0 323 aa10.16□□□□□ -0.78
LIMCH1-213ENST00000511496 SPATA31B1PQ5VZV4 182 aa10.16□□□□□ -0.78
LIMCH1-213ENST00000511496 LYZL4Q96KX0 146 aa10.16□□□□□ -0.78
LIMCH1-213ENST00000511496 RNASE7Q9H1E1 156 aaKnown RBP10.16□□□□□ -0.78
LIMCH1-213ENST00000511496 KCNIP2Q9NS61 270 aa10.16□□□□□ -0.78
LIMCH1-213ENST00000511496 C19orf25Q9UFG5 118 aaPredicted RBP10.16□□□□□ -0.78
LIMCH1-213ENST00000511496 F2RL2O00254 374 aa10.16□□□□□ -0.78
LIMCH1-213ENST00000511496 TLX3O43711 291 aaPredicted RBP10.16□□□□□ -0.78
LIMCH1-213ENST00000511496 IGFBP2P18065 325 aa10.16□□□□□ -0.78
LIMCH1-213ENST00000511496 CRYBB3P26998 211 aa10.16□□□□□ -0.78
LIMCH1-213ENST00000511496 TMEM97Q5BJF2 176 aa10.16□□□□□ -0.78
LIMCH1-213ENST00000511496 NANOS1Q8WY41 292 aaKnown RBP10.16□□□□□ -0.78
LIMCH1-213ENST00000511496 OR2V2Q96R30 315 aa10.16□□□□□ -0.78
LIMCH1-213ENST00000511496 PGLYRP1O75594 196 aaPredicted RBP10.15□□□□□ -0.78
LIMCH1-213ENST00000511496 CELA3AP09093 270 aa10.15□□□□□ -0.78
LIMCH1-213ENST00000511496 WASP42768 502 aa10.15□□□□□ -0.78
LIMCH1-213ENST00000511496 EDDM3BP56851 147 aa10.15□□□□□ -0.78
LIMCH1-213ENST00000511496 FUT7Q11130 342 aa10.15□□□□□ -0.78
LIMCH1-213ENST00000511496 LINC00173Q6ZV60 143 aa10.15□□□□□ -0.78
LIMCH1-213ENST00000511496 DOLPP1Q86YN1 238 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms