RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 NPIPB6E9PJ23 425 aa9.08□□□□□ -0.96
NEK1-206ENST00000510533 C19orf54Q5BKX5 351 aa9.08□□□□□ -0.96
NEK1-206ENST00000510533 SFXN3Q9BWM7 321 aa9.08□□□□□ -0.96
NEK1-206ENST00000510533 LY75O60449 1722 aa9.08□□□□□ -0.96
NEK1-206ENST00000510533 KIAA1217Q5T5P2 1943 aa9.08□□□□□ -0.96
NEK1-206ENST00000510533 TRBV9A0A0B4J1U6 114 aa9.08□□□□□ -0.96
NEK1-206ENST00000510533 SLC25A17O43808 307 aa9.08□□□□□ -0.96
NEK1-206ENST00000510533 NUDT3O95989 172 aa9.08□□□□□ -0.96
NEK1-206ENST00000510533 HLA-DRB1P01911 266 aa9.08□□□□□ -0.96
NEK1-206ENST00000510533 FHITP49789 147 aa9.08□□□□□ -0.96
NEK1-206ENST00000510533 CSRP3P50461 194 aa9.08□□□□□ -0.96
NEK1-206ENST00000510533 PSG9Q00887 426 aa9.08□□□□□ -0.96
NEK1-206ENST00000510533 ERASQ7Z444 233 aa9.08□□□□□ -0.96
NEK1-206ENST00000510533 SHISA5Q8N114 240 aa9.08□□□□□ -0.96
NEK1-206ENST00000510533 PARD6GQ9BYG4 376 aaPredicted RBP9.08□□□□□ -0.96
NEK1-206ENST00000510533 TRBV23-1A0A0A0MS06 115 aa9.08□□□□□ -0.96
NEK1-206ENST00000510533 MFAP4P55083 255 aa9.08□□□□□ -0.96
NEK1-206ENST00000510533 RNFT1Q5M7Z0 435 aa9.08□□□□□ -0.96
NEK1-206ENST00000510533 FAM53AQ6NSI3 398 aaPredicted RBP9.08□□□□□ -0.96
NEK1-206ENST00000510533 SRSF12Q8WXF0 261 aaKnown RBP9.08□□□□□ -0.96
NEK1-206ENST00000510533 TMEM70Q9BUB7 260 aa9.08□□□□□ -0.96
NEK1-206ENST00000510533 C19orf24Q9BVV8 132 aa9.08□□□□□ -0.96
NEK1-206ENST00000510533 TCF19Q9Y242 345 aa9.08□□□□□ -0.96
NEK1-206ENST00000510533 MIA3Q5JRA6 1907 aa9.07□□□□□ -0.96
NEK1-206ENST00000510533 ZNF708P17019 499 aa9.07□□□□□ -0.96
NEK1-206ENST00000510533 TFPI2P48307 235 aa9.07□□□□□ -0.96
NEK1-206ENST00000510533 C2orf68Q2NKX9 166 aa9.07□□□□□ -0.96
NEK1-206ENST00000510533 OR51G1Q8NGK1 321 aa9.07□□□□□ -0.96
NEK1-206ENST00000510533 GUCD1Q96NT3 240 aa9.07□□□□□ -0.96
NEK1-206ENST00000510533 HIST1H4GQ99525 98 aa9.07□□□□□ -0.96
NEK1-206ENST00000510533 TRAV30A0A087WSZ9 112 aa9.07□□□□□ -0.96
NEK1-206ENST00000510533 CDK2AP1O14519 115 aa9.07□□□□□ -0.96
NEK1-206ENST00000510533 ANOS1P23352 680 aa9.07□□□□□ -0.96
NEK1-206ENST00000510533 OTX1P32242 354 aaPredicted RBP9.07□□□□□ -0.96
NEK1-206ENST00000510533 KIAA1644Q3SXP7 199 aa9.07□□□□□ -0.96
NEK1-206ENST00000510533 AMMECR1LQ6DCA0 310 aa9.07□□□□□ -0.96
NEK1-206ENST00000510533 WNT5BQ9H1J7 359 aa9.07□□□□□ -0.96
NEK1-206ENST00000510533 KNTC1P50748 2209 aa9.07□□□□□ -0.96
NEK1-206ENST00000510533 CGB1A6NKQ9 187 aa9.07□□□□□ -0.96
NEK1-206ENST00000510533 NDUFA2O43678 99 aa9.07□□□□□ -0.96
NEK1-206ENST00000510533 UNQ5815/PRO19632Q6UWF5 114 aa9.07□□□□□ -0.96
NEK1-206ENST00000510533 OR10AG1Q8NH19 301 aa9.07□□□□□ -0.96
NEK1-206ENST00000510533 SFRP2Q96HF1 295 aa9.07□□□□□ -0.96
NEK1-206ENST00000510533 NEU1Q99519 415 aa9.07□□□□□ -0.96
NEK1-206ENST00000510533 PSMG3Q9BT73 122 aaPredicted RBP9.07□□□□□ -0.96
NEK1-206ENST00000510533 IFNL4K9M1U5 179 aa9.07□□□□□ -0.96
NEK1-206ENST00000510533 PTGDSP41222 190 aa9.07□□□□□ -0.96
NEK1-206ENST00000510533 MRPL32Q9BYC8 188 aaKnown RBP9.07□□□□□ -0.96
NEK1-206ENST00000510533 HS3ST3B1Q9Y662 390 aa9.07□□□□□ -0.96
NEK1-206ENST00000510533 LNP1A1A4G5 178 aa9.06□□□□□ -0.96
NEK1-206ENST00000510533 NPBWR2P48146 333 aa9.06□□□□□ -0.96
NEK1-206ENST00000510533 KLF14Q8TD94 323 aaPredicted RBP9.06□□□□□ -0.96
NEK1-206ENST00000510533 SRXN1Q9BYN0 137 aa9.06□□□□□ -0.96
NEK1-206ENST00000510533 CBLN4Q9NTU7 201 aa9.06□□□□□ -0.96
NEK1-206ENST00000510533 TMEM229AB2RXF0 380 aa9.06□□□□□ -0.96
NEK1-206ENST00000510533 PF4V1P10720 104 aa9.06□□□□□ -0.96
NEK1-206ENST00000510533 CX3CL1P78423 397 aa9.06□□□□□ -0.96
NEK1-206ENST00000510533 HERPUD1Q15011 391 aa9.06□□□□□ -0.96
NEK1-206ENST00000510533 SPRED2Q7Z698 418 aa9.06□□□□□ -0.96
NEK1-206ENST00000510533 ABHD12Q8N2K0 398 aa9.06□□□□□ -0.96
NEK1-206ENST00000510533 SDHCQ99643 169 aaPredicted RBP9.06□□□□□ -0.96
NEK1-206ENST00000510533 NABP2Q9BQ15 211 aa9.06□□□□□ -0.96
NEK1-206ENST00000510533 LOC390937A0A1W2PQ73 354 aa9.06□□□□□ -0.96
NEK1-206ENST00000510533 GRIFINA4D1Z8 144 aa9.06□□□□□ -0.96
NEK1-206ENST00000510533 WNT9BO14905 357 aa9.06□□□□□ -0.96
NEK1-206ENST00000510533 ZIC3O60481 467 aa9.06□□□□□ -0.96
NEK1-206ENST00000510533 ZNF506Q5JVG8 444 aa9.06□□□□□ -0.96
NEK1-206ENST00000510533 TCF24Q7RTU0 167 aa9.06□□□□□ -0.96
NEK1-206ENST00000510533 SLC25A45Q8N413 288 aa9.06□□□□□ -0.96
NEK1-206ENST00000510533 PHLDA3Q9Y5J5 127 aa9.06□□□□□ -0.96
NEK1-206ENST00000510533 ZNF831Q5JPB2 1677 aa9.06□□□□□ -0.96
NEK1-206ENST00000510533 NPIPB13A6NJU9 1138 aa9.06□□□□□ -0.96
NEK1-206ENST00000510533 NPIPB4C9JG80 1138 aa9.06□□□□□ -0.96
NEK1-206ENST00000510533 NPIPB9F8W1W9 429 aa9.06□□□□□ -0.96
NEK1-206ENST00000510533 IGLV3-21P80748 117 aaPredicted RBP9.06□□□□□ -0.96
NEK1-206ENST00000510533 DRAM1Q8N682 238 aa9.06□□□□□ -0.96
NEK1-206ENST00000510533 ATG2BQ96BY7 2078 aa9.06□□□□□ -0.96
NEK1-206ENST00000510533 TMEM250H0YL14 139 aa9.05□□□□□ -0.96
NEK1-206ENST00000510533 ZNF146Q15072 292 aa9.05□□□□□ -0.96
NEK1-206ENST00000510533 ASPHD2Q6ICH7 369 aa9.05□□□□□ -0.96
NEK1-206ENST00000510533 TMEM54Q969K7 222 aa9.05□□□□□ -0.96
NEK1-206ENST00000510533 GGACTQ9BVM4 153 aa9.05□□□□□ -0.96
NEK1-206ENST00000510533 MARF1Q9Y4F3 1742 aaKnown RBP9.05□□□□□ -0.96
NEK1-206ENST00000510533 GCHFRP30047 84 aa9.05□□□□□ -0.96
NEK1-206ENST00000510533 EGR4Q05215 589 aa9.05□□□□□ -0.96
NEK1-206ENST00000510533 TMEM30BQ3MIR4 351 aa9.05□□□□□ -0.96
NEK1-206ENST00000510533 C10orf128Q5T292 105 aa9.05□□□□□ -0.96
NEK1-206ENST00000510533 ARL6IP6Q8N6S5 226 aa9.05□□□□□ -0.96
NEK1-206ENST00000510533 GALNT14Q96FL9 552 aa9.05□□□□□ -0.96
NEK1-206ENST00000510533 WFIKKN1Q96NZ8 548 aa9.05□□□□□ -0.96
NEK1-206ENST00000510533 RTN4RQ9BZR6 473 aa9.05□□□□□ -0.96
NEK1-206ENST00000510533 QSER1Q2KHR3 1735 aa9.05□□□□□ -0.96
NEK1-206ENST00000510533 hCG_38984A0A1B0GV85 526 aa9.05□□□□□ -0.96
NEK1-206ENST00000510533 UBE2L6O14933 153 aa9.05□□□□□ -0.96
NEK1-206ENST00000510533 RBFOX2O43251 390 aaKnown RBP eCLIP9.05□□□□□ -0.96
NEK1-206ENST00000510533 GDF9O60383 454 aa9.05□□□□□ -0.96
NEK1-206ENST00000510533 LGALS3P17931 250 aaKnown RBP9.05□□□□□ -0.96
NEK1-206ENST00000510533 OR4C13Q8NGP0 309 aa9.05□□□□□ -0.96
NEK1-206ENST00000510533 LEAP2Q969E1 77 aa9.05□□□□□ -0.96
NEK1-206ENST00000510533 ZNF729A6NN14 1252 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms