RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 IGHV3-11P01762 117 aa13.84□□□□□ -0.19
TPM3-220ENST00000509601 SLURP1P55000 103 aa13.84□□□□□ -0.19
TPM3-220ENST00000509601 MXD1Q05195 221 aa13.84□□□□□ -0.19
TPM3-220ENST00000509601 VAX1Q5SQQ9 334 aa13.84□□□□□ -0.19
TPM3-220ENST00000509601 OR5T1Q8NG75 326 aa13.84□□□□□ -0.19
TPM3-220ENST00000509601 OR5H6Q8NGV6 325 aa13.84□□□□□ -0.19
TPM3-220ENST00000509601 LGALS14Q8TCE9 139 aa13.84□□□□□ -0.19
TPM3-220ENST00000509601 NUDCD2Q8WVJ2 157 aa13.84□□□□□ -0.19
TPM3-220ENST00000509601 RBM7Q9Y580 266 aaKnown RBP13.84□□□□□ -0.19
TPM3-220ENST00000509601 TMEM235A6NFC5 223 aa13.83□□□□□ -0.2
TPM3-220ENST00000509601 J3QRK9 145 aa13.83□□□□□ -0.2
TPM3-220ENST00000509601 OVOL1O14753 267 aa13.83□□□□□ -0.2
TPM3-220ENST00000509601 IGLV2-14P01704 120 aa13.83□□□□□ -0.2
TPM3-220ENST00000509601 HLA-DQB1P01920 261 aa13.83□□□□□ -0.2
TPM3-220ENST00000509601 HSPB1P04792 205 aaKnown RBP13.83□□□□□ -0.2
TPM3-220ENST00000509601 RRASP10301 218 aa13.83□□□□□ -0.2
TPM3-220ENST00000509601 INSL3P51460 131 aa13.83□□□□□ -0.2
TPM3-220ENST00000509601 GRPEL2Q8TAA5 225 aa13.83□□□□□ -0.2
TPM3-220ENST00000509601 HARBI1Q96MB7 349 aa13.83□□□□□ -0.2
TPM3-220ENST00000509601 SLA2Q9H6Q3 261 aa13.83□□□□□ -0.2
TPM3-220ENST00000509601 SHOXO15266 292 aa13.82□□□□□ -0.2
TPM3-220ENST00000509601 CNIH1O95406 144 aa13.82□□□□□ -0.2
TPM3-220ENST00000509601 CTXN2P0C2S0 81 aa13.82□□□□□ -0.2
TPM3-220ENST00000509601 CD36P16671 472 aa13.82□□□□□ -0.2
TPM3-220ENST00000509601 NFYAP23511 347 aaPredicted RBP13.82□□□□□ -0.2
TPM3-220ENST00000509601 PITPNAQ00169 270 aa13.82□□□□□ -0.2
TPM3-220ENST00000509601 CD69Q07108 199 aa13.82□□□□□ -0.2
TPM3-220ENST00000509601 CNIH2Q6PI25 160 aa13.82□□□□□ -0.2
TPM3-220ENST00000509601 ADTRPQ96IZ2 230 aa13.82□□□□□ -0.2
TPM3-220ENST00000509601 RHBDL2Q9NX52 303 aa13.82□□□□□ -0.2
TPM3-220ENST00000509601 OR2W1Q9Y3N9 320 aa13.82□□□□□ -0.2
TPM3-220ENST00000509601 LOC100506127A0A0U1RQW1 187 aa13.81□□□□□ -0.2
TPM3-220ENST00000509601 SCGNO76038 276 aa13.81□□□□□ -0.2
TPM3-220ENST00000509601 TRGV3P03979 118 aa13.81□□□□□ -0.2
TPM3-220ENST00000509601 CD40LGP29965 261 aa13.81□□□□□ -0.2
TPM3-220ENST00000509601 TPPP2P59282 170 aa13.81□□□□□ -0.2
TPM3-220ENST00000509601 RPL30P62888 115 aaKnown RBP13.81□□□□□ -0.2
TPM3-220ENST00000509601 DCTN2Q13561 401 aaKnown RBP13.81□□□□□ -0.2
TPM3-220ENST00000509601 NEDD8Q15843 81 aa13.81□□□□□ -0.2
TPM3-220ENST00000509601 RTL8BQ17RB0 113 aa13.81□□□□□ -0.2
TPM3-220ENST00000509601 KCTD21Q4G0X4 260 aa13.81□□□□□ -0.2
TPM3-220ENST00000509601 ZNF429Q86V71 674 aa13.81□□□□□ -0.2
TPM3-220ENST00000509601 TEX45Q8NA69 505 aa13.81□□□□□ -0.2
TPM3-220ENST00000509601 POC5Q8NA72 575 aa13.81□□□□□ -0.2
TPM3-220ENST00000509601 SLC25A38Q96DW6 304 aa13.81□□□□□ -0.2
TPM3-220ENST00000509601 TMEM68Q96MH6 324 aa13.81□□□□□ -0.2
TPM3-220ENST00000509601 ZNF256Q9Y2P7 627 aaPredicted RBP13.81□□□□□ -0.2
TPM3-220ENST00000509601 IGKV1D-13A0A0B4J2D9 117 aa13.8□□□□□ -0.2
TPM3-220ENST00000509601 H3BUA1 57 aa13.8□□□□□ -0.2
TPM3-220ENST00000509601 BRI3O95415 125 aa13.8□□□□□ -0.2
TPM3-220ENST00000509601 CRYZL1O95825 349 aa13.8□□□□□ -0.2
TPM3-220ENST00000509601 IGKV1-13P0DP09 117 aa13.8□□□□□ -0.2
TPM3-220ENST00000509601 UBE2KP61086 200 aa13.8□□□□□ -0.2
TPM3-220ENST00000509601 IDNKQ5T6J7 187 aa13.8□□□□□ -0.2
TPM3-220ENST00000509601 ACSM6Q6P461 480 aa13.8□□□□□ -0.2
TPM3-220ENST00000509601 ZNF645Q8N7E2 425 aa13.8□□□□□ -0.2
TPM3-220ENST00000509601 ANXA10Q9UJ72 324 aa13.8□□□□□ -0.2
TPM3-220ENST00000509601 TRAV18A0A075B6X5 111 aa13.79□□□□□ -0.2
TPM3-220ENST00000509601 TUSC2O75896 110 aa13.79□□□□□ -0.2
TPM3-220ENST00000509601 SCAND1P57086 179 aa13.79□□□□□ -0.2
TPM3-220ENST00000509601 GNG2P59768 71 aa13.79□□□□□ -0.2
TPM3-220ENST00000509601 EIF4EBP1Q13541 118 aaPredicted RBP13.79□□□□□ -0.2
TPM3-220ENST00000509601 PRSS8Q16651 343 aa13.79□□□□□ -0.2
TPM3-220ENST00000509601 OSR1Q8TAX0 266 aaPredicted RBP13.79□□□□□ -0.2
TPM3-220ENST00000509601 ZNF355PQ9NSJ1 428 aa13.79□□□□□ -0.2
TPM3-220ENST00000509601 RBMX2Q9Y388 322 aaKnown RBP13.79□□□□□ -0.2
TPM3-220ENST00000509601 MSGN1A6NI15 193 aa13.78□□□□□ -0.2
TPM3-220ENST00000509601 RBMXL2O75526 392 aaKnown RBP13.78□□□□□ -0.2
TPM3-220ENST00000509601 BRWD1-AS2P59051 145 aa13.78□□□□□ -0.2
TPM3-220ENST00000509601 CBX3Q13185 183 aa13.78□□□□□ -0.2
TPM3-220ENST00000509601 VMA21Q3ZAQ7 101 aa13.78□□□□□ -0.2
TPM3-220ENST00000509601 IDO2Q6ZQW0 420 aa13.78□□□□□ -0.2
TPM3-220ENST00000509601 GVQW1Q8N7I0 195 aa13.78□□□□□ -0.2
TPM3-220ENST00000509601 ETV7Q9Y603 341 aa13.78□□□□□ -0.2
TPM3-220ENST00000509601 FCGR3BO75015 233 aa13.77□□□□□ -0.21
TPM3-220ENST00000509601 SAP30O75446 220 aa13.77□□□□□ -0.21
TPM3-220ENST00000509601 SLC22A5O76082 557 aa13.77□□□□□ -0.21
TPM3-220ENST00000509601 PTHLHP12272 177 aa13.77□□□□□ -0.21
TPM3-220ENST00000509601 TGFBR1P36897 503 aa13.77□□□□□ -0.21
TPM3-220ENST00000509601 TINAGL1Q9GZM7 467 aaPredicted RBP13.77□□□□□ -0.21
TPM3-220ENST00000509601 RANGRFQ9HD47 186 aaPredicted RBP13.77□□□□□ -0.21
TPM3-220ENST00000509601 TENM3Q9P273 2699 aa13.76□□□□□ -0.21
TPM3-220ENST00000509601 A0A0G2JLM5 398 aa13.76□□□□□ -0.21
TPM3-220ENST00000509601 C13orf42A0A1B0GVH6 325 aa13.76□□□□□ -0.21
TPM3-220ENST00000509601 NHLRC4P0CG21 123 aaPredicted RBP13.76□□□□□ -0.21
TPM3-220ENST00000509601 APELAP0DMC3 54 aa13.76□□□□□ -0.21
TPM3-220ENST00000509601 SPNP16150 400 aa13.76□□□□□ -0.21
TPM3-220ENST00000509601 OVCH2Q7RTZ1 564 aa13.76□□□□□ -0.21
TPM3-220ENST00000509601 HOGA1Q86XE5 327 aa13.76□□□□□ -0.21
TPM3-220ENST00000509601 AUNIPQ9H7T9 357 aa13.76□□□□□ -0.21
TPM3-220ENST00000509601 ZNF430Q9H8G1 570 aaPredicted RBP13.76□□□□□ -0.21
TPM3-220ENST00000509601 SPATA2Q9UM82 520 aa13.76□□□□□ -0.21
TPM3-220ENST00000509601 A0A0A6YYH2 397 aa13.75□□□□□ -0.21
TPM3-220ENST00000509601 A6NJ64 397 aa13.75□□□□□ -0.21
TPM3-220ENST00000509601 SAA1P0DJI8 122 aaPredicted RBP13.75□□□□□ -0.21
TPM3-220ENST00000509601 AADACP22760 399 aa13.75□□□□□ -0.21
TPM3-220ENST00000509601 RPS19P39019 145 aaKnown RBP13.75□□□□□ -0.21
TPM3-220ENST00000509601 DEFA5Q01523 94 aa13.75□□□□□ -0.21
TPM3-220ENST00000509601 DYRK1AQ13627 763 aa13.75□□□□□ -0.21
TPM3-220ENST00000509601 KLF5Q13887 457 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms