RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 RAB29O14966 203 aa5.64□□□□□ -1.51
TOPBP1-207ENST00000509162 ATP6V0E1O15342 81 aa5.64□□□□□ -1.51
TOPBP1-207ENST00000509162 RBMXL2O75526 392 aaKnown RBP5.64□□□□□ -1.51
TOPBP1-207ENST00000509162 HLA-DRB1P01911 266 aa5.64□□□□□ -1.51
TOPBP1-207ENST00000509162 APOA1P02647 267 aa5.64□□□□□ -1.51
TOPBP1-207ENST00000509162 FAM106CPP0CH98 169 aa5.64□□□□□ -1.51
TOPBP1-207ENST00000509162 ZBTB25P24278 435 aa5.64□□□□□ -1.51
TOPBP1-207ENST00000509162 DUTP33316 252 aaKnown RBP5.64□□□□□ -1.51
TOPBP1-207ENST00000509162 DGCR2P98153 550 aa5.64□□□□□ -1.51
TOPBP1-207ENST00000509162 CD83Q01151 205 aa5.64□□□□□ -1.51
TOPBP1-207ENST00000509162 KIAA0141Q14154 515 aaPredicted RBP5.64□□□□□ -1.51
TOPBP1-207ENST00000509162 KIR2DS1Q14954 304 aa5.64□□□□□ -1.51
TOPBP1-207ENST00000509162 MMDQ15546 238 aa5.64□□□□□ -1.51
TOPBP1-207ENST00000509162 C5orf64Q2M2E5 130 aa5.64□□□□□ -1.51
TOPBP1-207ENST00000509162 C9orf152Q5JTZ5 239 aa5.64□□□□□ -1.51
TOPBP1-207ENST00000509162 TMEM69Q5SWH9 247 aa5.64□□□□□ -1.51
TOPBP1-207ENST00000509162 ASPHD1Q5U4P2 390 aa5.64□□□□□ -1.51
TOPBP1-207ENST00000509162 BEST4Q8NFU0 473 aa5.64□□□□□ -1.51
TOPBP1-207ENST00000509162 NPBQ8NG41 125 aa5.64□□□□□ -1.51
TOPBP1-207ENST00000509162 OR2T10Q8NGZ9 312 aa5.64□□□□□ -1.51
TOPBP1-207ENST00000509162 MYOZ3Q8TDC0 251 aa5.64□□□□□ -1.51
TOPBP1-207ENST00000509162 ABHD1Q96SE0 405 aa5.64□□□□□ -1.51
TOPBP1-207ENST00000509162 NXF2Q9GZY0 626 aaKnown RBP5.64□□□□□ -1.51
TOPBP1-207ENST00000509162 FBXL15Q9H469 300 aa5.64□□□□□ -1.51
TOPBP1-207ENST00000509162 LIN7CQ9NUP9 197 aaKnown RBP5.64□□□□□ -1.51
TOPBP1-207ENST00000509162 MGAT4AQ9UM21 535 aa5.64□□□□□ -1.51
TOPBP1-207ENST00000509162 NOTCH3Q9UM47 2321 aa5.63□□□□□ -1.51
TOPBP1-207ENST00000509162 OR5H14A6NHG9 310 aa5.63□□□□□ -1.51
TOPBP1-207ENST00000509162 NBR2O15453 112 aa5.63□□□□□ -1.51
TOPBP1-207ENST00000509162 HSPA12AO43301 675 aa5.63□□□□□ -1.51
TOPBP1-207ENST00000509162 SCGNO76038 276 aa5.63□□□□□ -1.51
TOPBP1-207ENST00000509162 RGS11O94810 467 aa5.63□□□□□ -1.51
TOPBP1-207ENST00000509162 MYOD1P15172 320 aa5.63□□□□□ -1.51
TOPBP1-207ENST00000509162 ZNF182P17025 639 aaPredicted RBP5.63□□□□□ -1.51
TOPBP1-207ENST00000509162 PPIFP30405 207 aaKnown RBP5.63□□□□□ -1.51
TOPBP1-207ENST00000509162 RPL5P46777 297 aaKnown RBP5.63□□□□□ -1.51
TOPBP1-207ENST00000509162 PJVKQ0ZLH3 352 aa5.63□□□□□ -1.51
TOPBP1-207ENST00000509162 PSG5Q15238 335 aa5.63□□□□□ -1.51
TOPBP1-207ENST00000509162 OR2B11Q5JQS5 317 aa5.63□□□□□ -1.51
TOPBP1-207ENST00000509162 C10orf55Q5SWW7 151 aa5.63□□□□□ -1.51
TOPBP1-207ENST00000509162 CNIH2Q6PI25 160 aa5.63□□□□□ -1.51
TOPBP1-207ENST00000509162 C19orf35Q6ZS72 473 aa5.63□□□□□ -1.51
TOPBP1-207ENST00000509162 SNX29P2Q8IUI4 249 aa5.63□□□□□ -1.51
TOPBP1-207ENST00000509162 STPG2Q8N412 459 aa5.63□□□□□ -1.51
TOPBP1-207ENST00000509162 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.63□□□□□ -1.51
TOPBP1-207ENST00000509162 OR4D10Q8NGI6 311 aa5.63□□□□□ -1.51
TOPBP1-207ENST00000509162 OR52I2Q8NH67 350 aa5.63□□□□□ -1.51
TOPBP1-207ENST00000509162 FAM103A1Q9BTL3 118 aaKnown RBP5.63□□□□□ -1.51
TOPBP1-207ENST00000509162 RAB9BQ9NP90 201 aa5.63□□□□□ -1.51
TOPBP1-207ENST00000509162 CCL28Q9NRJ3 127 aa5.63□□□□□ -1.51
TOPBP1-207ENST00000509162 PIPOXQ9P0Z9 390 aa5.63□□□□□ -1.51
TOPBP1-207ENST00000509162 EXTL2Q9UBQ6 330 aa5.63□□□□□ -1.51
TOPBP1-207ENST00000509162 RBMX2Q9Y388 322 aaKnown RBP5.63□□□□□ -1.51
TOPBP1-207ENST00000509162 WASHC3Q9Y3C0 194 aa5.63□□□□□ -1.51
TOPBP1-207ENST00000509162 OR2W1Q9Y3N9 320 aa5.63□□□□□ -1.51
TOPBP1-207ENST00000509162 TNCP24821 2201 aa5.62□□□□□ -1.51
TOPBP1-207ENST00000509162 A0A1W2PRX2 142 aa5.62□□□□□ -1.51
TOPBP1-207ENST00000509162 CGB1A6NKQ9 187 aa5.62□□□□□ -1.51
TOPBP1-207ENST00000509162 NCBP2LA6PVI3 153 aaKnown RBP5.62□□□□□ -1.51
TOPBP1-207ENST00000509162 RRHO14718 337 aa5.62□□□□□ -1.51
TOPBP1-207ENST00000509162 SLC25A17O43808 307 aa5.62□□□□□ -1.51
TOPBP1-207ENST00000509162 CA2P00918 260 aa5.62□□□□□ -1.51
TOPBP1-207ENST00000509162 PPYP01298 95 aa5.62□□□□□ -1.51
TOPBP1-207ENST00000509162 PMP2P02689 132 aa5.62□□□□□ -1.51
TOPBP1-207ENST00000509162 IGF1P05019 195 aa5.62□□□□□ -1.51
TOPBP1-207ENST00000509162 TALDO1P37837 337 aa5.62□□□□□ -1.51
TOPBP1-207ENST00000509162 RORCP51449 518 aa5.62□□□□□ -1.51
TOPBP1-207ENST00000509162 ARHGDIBP52566 201 aa5.62□□□□□ -1.51
TOPBP1-207ENST00000509162 CRIP2P52943 208 aaPredicted RBP5.62□□□□□ -1.51
TOPBP1-207ENST00000509162 TMBIM6P55061 237 aa5.62□□□□□ -1.51
TOPBP1-207ENST00000509162 DEFA5Q01523 94 aa5.62□□□□□ -1.51
TOPBP1-207ENST00000509162 NSUN5P1Q3KNT7 163 aa5.62□□□□□ -1.51
TOPBP1-207ENST00000509162 FAM209BQ5JX69 171 aa5.62□□□□□ -1.51
TOPBP1-207ENST00000509162 FAAP20Q6NZ36 180 aa5.62□□□□□ -1.51
TOPBP1-207ENST00000509162 IDO2Q6ZQW0 420 aa5.62□□□□□ -1.51
TOPBP1-207ENST00000509162 ZNF818PQ6ZRF7 136 aa5.62□□□□□ -1.51
TOPBP1-207ENST00000509162 SLC35E3Q7Z769 313 aa5.62□□□□□ -1.51
TOPBP1-207ENST00000509162 PDPNQ86YL7 162 aa5.62□□□□□ -1.51
TOPBP1-207ENST00000509162 CROCCP3Q8IVE0 287 aa5.62□□□□□ -1.51
TOPBP1-207ENST00000509162 ZNF645Q8N7E2 425 aa5.62□□□□□ -1.51
TOPBP1-207ENST00000509162 OR5AU1Q8NGC0 362 aa5.62□□□□□ -1.51
TOPBP1-207ENST00000509162 OR10J5Q8NHC4 309 aa5.62□□□□□ -1.51
TOPBP1-207ENST00000509162 CASTOR1Q8WTX7 329 aa5.62□□□□□ -1.51
TOPBP1-207ENST00000509162 RAB2BQ8WUD1 216 aa5.62□□□□□ -1.51
TOPBP1-207ENST00000509162 DUX3Q96PT4 197 aa5.62□□□□□ -1.51
TOPBP1-207ENST00000509162 SOSTQ9BQB4 213 aa5.62□□□□□ -1.51
TOPBP1-207ENST00000509162 GINS4Q9BRT9 223 aa5.62□□□□□ -1.51
TOPBP1-207ENST00000509162 TINAGL1Q9GZM7 467 aaPredicted RBP5.62□□□□□ -1.51
TOPBP1-207ENST00000509162 KLK15Q9H2R5 256 aa5.62□□□□□ -1.51
TOPBP1-207ENST00000509162 GNB4Q9HAV0 340 aa5.62□□□□□ -1.51
TOPBP1-207ENST00000509162 SLC35D1Q9NTN3 355 aa5.62□□□□□ -1.51
TOPBP1-207ENST00000509162 ZNF580Q9UK33 172 aa5.62□□□□□ -1.51
TOPBP1-207ENST00000509162 PLA2G2DQ9UNK4 145 aa5.62□□□□□ -1.51
TOPBP1-207ENST00000509162 V9GYH0 126 aa5.62□□□□□ -1.51
TOPBP1-207ENST00000509162 DNAH7Q8WXX0 4024 aa5.62□□□□□ -1.51
TOPBP1-207ENST00000509162 PSMB11A5LHX3 300 aa5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 M0QYG6 137 aa5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 M0QZK8 103 aa5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 KCNAB3O43448 404 aa5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 TNFSF12O43508 249 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms