RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 OVCH2Q7RTZ1 564 aa9.59□□□□□ -0.87
PDPN-208ENST00000509009 H1FOOQ8IZA3 346 aaPredicted RBP9.59□□□□□ -0.87
PDPN-208ENST00000509009 DDB2Q92466 427 aa9.59□□□□□ -0.87
PDPN-208ENST00000509009 TMEM68Q96MH6 324 aa9.59□□□□□ -0.87
PDPN-208ENST00000509009 ELOVL1Q9BW60 279 aa9.59□□□□□ -0.87
PDPN-208ENST00000509009 ELF5Q9UKW6 265 aaPredicted RBP9.59□□□□□ -0.87
PDPN-208ENST00000509009 RBM7Q9Y580 266 aaKnown RBP9.59□□□□□ -0.87
PDPN-208ENST00000509009 A0A0G2JLM5 398 aa9.58□□□□□ -0.88
PDPN-208ENST00000509009 ANKRD34BA5PLL1 514 aa9.58□□□□□ -0.88
PDPN-208ENST00000509009 ERICH4A6NGS2 130 aa9.58□□□□□ -0.88
PDPN-208ENST00000509009 MSGN1A6NI15 193 aa9.58□□□□□ -0.88
PDPN-208ENST00000509009 TRIM64CA6NLI5 447 aa9.58□□□□□ -0.88
PDPN-208ENST00000509009 RRASP10301 218 aa9.58□□□□□ -0.88
PDPN-208ENST00000509009 DUTP33316 252 aaKnown RBP9.58□□□□□ -0.88
PDPN-208ENST00000509009 Q8N1Y9 231 aa9.58□□□□□ -0.88
PDPN-208ENST00000509009 TEX45Q8NA69 505 aa9.58□□□□□ -0.88
PDPN-208ENST00000509009 ADTRPQ96IZ2 230 aa9.58□□□□□ -0.88
PDPN-208ENST00000509009 HARBI1Q96MB7 349 aa9.58□□□□□ -0.88
PDPN-208ENST00000509009 GINS4Q9BRT9 223 aa9.58□□□□□ -0.88
PDPN-208ENST00000509009 CENPOQ9BU64 300 aa9.58□□□□□ -0.88
PDPN-208ENST00000509009 ATG5Q9H1Y0 275 aa9.58□□□□□ -0.88
PDPN-208ENST00000509009 RAB26Q9ULW5 256 aa9.58□□□□□ -0.88
PDPN-208ENST00000509009 HUWE1Q7Z6Z7 4374 aaKnown RBP9.57□□□□□ -0.88
PDPN-208ENST00000509009 LINC00473A8K010 186 aa9.57□□□□□ -0.88
PDPN-208ENST00000509009 MRPS14O60783 128 aaKnown RBP9.57□□□□□ -0.88
PDPN-208ENST00000509009 IGLV1-51P01701 117 aa9.57□□□□□ -0.88
PDPN-208ENST00000509009 FRMD6-AS1P0C7T7 363 aa9.57□□□□□ -0.88
PDPN-208ENST00000509009 ZP3P21754 424 aa9.57□□□□□ -0.88
PDPN-208ENST00000509009 CBX3Q13185 183 aa9.57□□□□□ -0.88
PDPN-208ENST00000509009 PRSS8Q16651 343 aa9.57□□□□□ -0.88
PDPN-208ENST00000509009 RTL8BQ17RB0 113 aa9.57□□□□□ -0.88
PDPN-208ENST00000509009 UBE2UQ5VVX9 321 aa9.57□□□□□ -0.88
PDPN-208ENST00000509009 IL34Q6ZMJ4 242 aa9.57□□□□□ -0.88
PDPN-208ENST00000509009 ST6GALNAC5Q9BVH7 336 aa9.57□□□□□ -0.88
PDPN-208ENST00000509009 TINAGL1Q9GZM7 467 aaPredicted RBP9.57□□□□□ -0.88
PDPN-208ENST00000509009 SMIM30A4D0T7 59 aa9.56□□□□□ -0.88
PDPN-208ENST00000509009 NOTOA8MTQ0 251 aa9.56□□□□□ -0.88
PDPN-208ENST00000509009 C3orf84H3BNL1 204 aa9.56□□□□□ -0.88
PDPN-208ENST00000509009 RBMXL2O75526 392 aaKnown RBP9.56□□□□□ -0.88
PDPN-208ENST00000509009 CRYZL1O95825 349 aa9.56□□□□□ -0.88
PDPN-208ENST00000509009 DTYMKP23919 212 aa9.56□□□□□ -0.88
PDPN-208ENST00000509009 FGF9P31371 208 aaPredicted RBP9.56□□□□□ -0.88
PDPN-208ENST00000509009 UBE2KP61086 200 aa9.56□□□□□ -0.88
PDPN-208ENST00000509009 ARL6IP1Q15041 203 aa9.56□□□□□ -0.88
PDPN-208ENST00000509009 VMA21Q3ZAQ7 101 aa9.56□□□□□ -0.88
PDPN-208ENST00000509009 HACD4Q5VWC8 232 aa9.56□□□□□ -0.88
PDPN-208ENST00000509009 ZNF343Q6P1L6 599 aa9.56□□□□□ -0.88
PDPN-208ENST00000509009 HAPLN4Q86UW8 402 aa9.56□□□□□ -0.88
PDPN-208ENST00000509009 ANKRD13BQ86YJ7 626 aa9.56□□□□□ -0.88
PDPN-208ENST00000509009 SPARTQ8N0X7 666 aa9.56□□□□□ -0.88
PDPN-208ENST00000509009 USMG5Q96IX5 58 aa9.56□□□□□ -0.88
PDPN-208ENST00000509009 TXNL4BQ9NX01 149 aaKnown RBP9.56□□□□□ -0.88
PDPN-208ENST00000509009 PEF1Q9UBV8 284 aaKnown RBP9.56□□□□□ -0.88
PDPN-208ENST00000509009 STUB1Q9UNE7 303 aa9.56□□□□□ -0.88
PDPN-208ENST00000509009 J3QRK9 145 aa9.55□□□□□ -0.88
PDPN-208ENST00000509009 CTXN2P0C2S0 81 aa9.55□□□□□ -0.88
PDPN-208ENST00000509009 APELAP0DMC3 54 aa9.55□□□□□ -0.88
PDPN-208ENST00000509009 AADACP22760 399 aa9.55□□□□□ -0.88
PDPN-208ENST00000509009 GABARAPL2P60520 117 aa9.55□□□□□ -0.88
PDPN-208ENST00000509009 DEFA5Q01523 94 aa9.55□□□□□ -0.88
PDPN-208ENST00000509009 DYRK1AQ13627 763 aa9.55□□□□□ -0.88
PDPN-208ENST00000509009 TPRA1Q86W33 373 aa9.55□□□□□ -0.88
PDPN-208ENST00000509009 ADAD2Q8NCV1 583 aaKnown RBP9.55□□□□□ -0.88
PDPN-208ENST00000509009 OSR1Q8TAX0 266 aaPredicted RBP9.55□□□□□ -0.88
PDPN-208ENST00000509009 RCHY1Q96PM5 261 aa9.55□□□□□ -0.88
PDPN-208ENST00000509009 DCSTAMPQ9H295 470 aa9.55□□□□□ -0.88
PDPN-208ENST00000509009 OR2W1Q9Y3N9 320 aa9.55□□□□□ -0.88
PDPN-208ENST00000509009 RYR3Q15413 4870 aa9.55□□□□□ -0.88
PDPN-208ENST00000509009 DNAH7Q8WXX0 4024 aa9.54□□□□□ -0.88
PDPN-208ENST00000509009 TRBV12-3P01733 135 aa9.54□□□□□ -0.88
PDPN-208ENST00000509009 HLA-DQB1P01920 261 aa9.54□□□□□ -0.88
PDPN-208ENST00000509009 OR9G9P0C7N8 305 aa9.54□□□□□ -0.88
PDPN-208ENST00000509009 NFYAP23511 347 aaPredicted RBP9.54□□□□□ -0.88
PDPN-208ENST00000509009 SYNJ2BPP57105 145 aa9.54□□□□□ -0.88
PDPN-208ENST00000509009 TNXAQ16473 311 aa9.54□□□□□ -0.88
PDPN-208ENST00000509009 IDO2Q6ZQW0 420 aa9.54□□□□□ -0.88
PDPN-208ENST00000509009 OR9G4Q8NGQ1 327 aa9.54□□□□□ -0.88
PDPN-208ENST00000509009 SRSF12Q8WXF0 261 aaKnown RBP9.54□□□□□ -0.88
PDPN-208ENST00000509009 PHB2Q99623 299 aa9.54□□□□□ -0.88
PDPN-208ENST00000509009 RSRP1Q9BUV0 290 aa9.54□□□□□ -0.88
PDPN-208ENST00000509009 C19orf73Q9NVV2 129 aa9.54□□□□□ -0.88
PDPN-208ENST00000509009 COA4Q9NYJ1 87 aa9.54□□□□□ -0.88
PDPN-208ENST00000509009 ADAM30Q9UKF2 790 aa9.54□□□□□ -0.88
PDPN-208ENST00000509009 TENM2Q9NT68 2774 aa9.53□□□□□ -0.88
PDPN-208ENST00000509009 IGKV1D-13A0A0B4J2D9 117 aa9.53□□□□□ -0.88
PDPN-208ENST00000509009 TMEM235A6NFC5 223 aa9.53□□□□□ -0.88
PDPN-208ENST00000509009 A8MZ25 164 aa9.53□□□□□ -0.88
PDPN-208ENST00000509009 SSX5O60225 188 aa9.53□□□□□ -0.88
PDPN-208ENST00000509009 FCGR3BO75015 233 aa9.53□□□□□ -0.88
PDPN-208ENST00000509009 IGLV2-14P01704 120 aa9.53□□□□□ -0.88
PDPN-208ENST00000509009 CSN3P07498 182 aa9.53□□□□□ -0.88
PDPN-208ENST00000509009 IGHV4-30-4P0DP06 118 aa9.53□□□□□ -0.88
PDPN-208ENST00000509009 IGKV1-13P0DP09 117 aa9.53□□□□□ -0.88
PDPN-208ENST00000509009 PSMB9P28065 219 aa9.53□□□□□ -0.88
PDPN-208ENST00000509009 RPL30P62888 115 aaKnown RBP9.53□□□□□ -0.88
PDPN-208ENST00000509009 TATDN3Q17R31 274 aa9.53□□□□□ -0.88
PDPN-208ENST00000509009 CNIH2Q6PI25 160 aa9.53□□□□□ -0.88
PDPN-208ENST00000509009 ZNF645Q8N7E2 425 aa9.53□□□□□ -0.88
PDPN-208ENST00000509009 MUC7Q8TAX7 377 aa9.53□□□□□ -0.88
PDPN-208ENST00000509009 NUDCD2Q8WVJ2 157 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms