RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 IGKV1-16P04430 117 aa7.26□□□□□ -1.25
NUP54-207ENST00000508583 AMY1AP04745 511 aa7.26□□□□□ -1.25
NUP54-207ENST00000508583 AMY2AP04746 511 aa7.26□□□□□ -1.25
NUP54-207ENST00000508583 AKAIN1P0CW23 69 aa7.26□□□□□ -1.25
NUP54-207ENST00000508583 VSIG10L2P0DP72 767 aa7.26□□□□□ -1.25
NUP54-207ENST00000508583 ETV6P41212 452 aa7.26□□□□□ -1.25
NUP54-207ENST00000508583 F2RL1P55085 397 aa7.26□□□□□ -1.25
NUP54-207ENST00000508583 UCP3P55916 312 aa7.26□□□□□ -1.25
NUP54-207ENST00000508583 DGCR2P98153 550 aa7.26□□□□□ -1.25
NUP54-207ENST00000508583 C5orf64Q2M2E5 130 aa7.26□□□□□ -1.25
NUP54-207ENST00000508583 AADACL3Q5VUY0 350 aa7.26□□□□□ -1.25
NUP54-207ENST00000508583 ZNF660Q6AZW8 331 aaPredicted RBP7.26□□□□□ -1.25
NUP54-207ENST00000508583 LIN54Q6MZP7 749 aa7.26□□□□□ -1.25
NUP54-207ENST00000508583 LINC00299Q6ZSB3 139 aa7.26□□□□□ -1.25
NUP54-207ENST00000508583 CENPVQ7Z7K6 275 aaPredicted RBP7.26□□□□□ -1.25
NUP54-207ENST00000508583 COMMD1Q8N668 190 aa7.26□□□□□ -1.25
NUP54-207ENST00000508583 KLHDC1Q8N7A1 406 aa7.26□□□□□ -1.25
NUP54-207ENST00000508583 TCTEX1D1Q8N7M0 179 aa7.26□□□□□ -1.25
NUP54-207ENST00000508583 OR4X2Q8NGF9 303 aa7.26□□□□□ -1.25
NUP54-207ENST00000508583 ZNF486Q96H40 463 aaPredicted RBP7.26□□□□□ -1.25
NUP54-207ENST00000508583 PRRT1Q99946 306 aa7.26□□□□□ -1.25
NUP54-207ENST00000508583 SOSTQ9BQB4 213 aa7.26□□□□□ -1.25
NUP54-207ENST00000508583 PLSCR3Q9NRY6 295 aa7.26□□□□□ -1.25
NUP54-207ENST00000508583 SERTAD4Q9NUC0 356 aa7.26□□□□□ -1.25
NUP54-207ENST00000508583 METTL1Q9UBP6 276 aaKnown RBP7.26□□□□□ -1.25
NUP54-207ENST00000508583 ZNF580Q9UK33 172 aa7.26□□□□□ -1.25
NUP54-207ENST00000508583 STAB1Q9NY15 2570 aa7.26□□□□□ -1.25
NUP54-207ENST00000508583 DNHD1Q96M86 4753 aa7.25□□□□□ -1.25
NUP54-207ENST00000508583 FCGR3BO75015 233 aa7.25□□□□□ -1.25
NUP54-207ENST00000508583 PROP1O75360 226 aa7.25□□□□□ -1.25
NUP54-207ENST00000508583 ACTL6BO94805 426 aa7.25□□□□□ -1.25
NUP54-207ENST00000508583 CRYZL1O95825 349 aa7.25□□□□□ -1.25
NUP54-207ENST00000508583 OPN1MWP04001 364 aa7.25□□□□□ -1.25
NUP54-207ENST00000508583 OPN1MW2P0DN77 364 aa7.25□□□□□ -1.25
NUP54-207ENST00000508583 OPN1MW3P0DN78 364 aa7.25□□□□□ -1.25
NUP54-207ENST00000508583 VDAC1P21796 283 aa7.25□□□□□ -1.25
NUP54-207ENST00000508583 INPP1P49441 399 aa7.25□□□□□ -1.25
NUP54-207ENST00000508583 ZNF45Q02386 682 aa7.25□□□□□ -1.25
NUP54-207ENST00000508583 TMEM177Q53S58 311 aa7.25□□□□□ -1.25
NUP54-207ENST00000508583 ZNF818PQ6ZRF7 136 aa7.25□□□□□ -1.25
NUP54-207ENST00000508583 CCDC190Q86UF4 302 aa7.25□□□□□ -1.25
NUP54-207ENST00000508583 Q8N402 240 aa7.25□□□□□ -1.25
NUP54-207ENST00000508583 MFSD4AQ8N468 514 aa7.25□□□□□ -1.25
NUP54-207ENST00000508583 GDPD1Q8N9F7 314 aa7.25□□□□□ -1.25
NUP54-207ENST00000508583 OR6Q1Q8NGQ2 317 aa7.25□□□□□ -1.25
NUP54-207ENST00000508583 SGMS2Q8NHU3 365 aa7.25□□□□□ -1.25
NUP54-207ENST00000508583 ZFAND1Q8TCF1 268 aa7.25□□□□□ -1.25
NUP54-207ENST00000508583 DDB2Q92466 427 aa7.25□□□□□ -1.25
NUP54-207ENST00000508583 SCGB3A2Q96PL1 93 aa7.25□□□□□ -1.25
NUP54-207ENST00000508583 CITED1Q99966 193 aa7.25□□□□□ -1.25
NUP54-207ENST00000508583 THAP7Q9BT49 309 aaPredicted RBP7.25□□□□□ -1.25
NUP54-207ENST00000508583 WNT10AQ9GZT5 417 aa7.25□□□□□ -1.25
NUP54-207ENST00000508583 CCL28Q9NRJ3 127 aa7.25□□□□□ -1.25
NUP54-207ENST00000508583 SCP2D1Q9UJQ7 156 aa7.25□□□□□ -1.25
NUP54-207ENST00000508583 ANKRD20A5PA0PJZ0 165 aa7.24□□□□□ -1.25
NUP54-207ENST00000508583 PSMB11A5LHX3 300 aa7.24□□□□□ -1.25
NUP54-207ENST00000508583 LINC00473A8K010 186 aa7.24□□□□□ -1.25
NUP54-207ENST00000508583 M0QYG6 137 aa7.24□□□□□ -1.25
NUP54-207ENST00000508583 M0QZ24 198 aa7.24□□□□□ -1.25
NUP54-207ENST00000508583 SLC25A17O43808 307 aa7.24□□□□□ -1.25
NUP54-207ENST00000508583 FBXO24O75426 580 aa7.24□□□□□ -1.25
NUP54-207ENST00000508583 B3GALNT1O75752 331 aa7.24□□□□□ -1.25
NUP54-207ENST00000508583 IGLV2-14P01704 120 aa7.24□□□□□ -1.25
NUP54-207ENST00000508583 IGF1P05019 195 aa7.24□□□□□ -1.25
NUP54-207ENST00000508583 PGAM2P15259 253 aa7.24□□□□□ -1.25
NUP54-207ENST00000508583 CD40LGP29965 261 aa7.24□□□□□ -1.25
NUP54-207ENST00000508583 GNRHRP30968 328 aa7.24□□□□□ -1.25
NUP54-207ENST00000508583 UBE2KP61086 200 aa7.24□□□□□ -1.25
NUP54-207ENST00000508583 ERVK-16P61578 105 aa7.24□□□□□ -1.25
NUP54-207ENST00000508583 TMEM267Q0VDI3 215 aaPredicted RBP7.24□□□□□ -1.25
NUP54-207ENST00000508583 PSG5Q15238 335 aa7.24□□□□□ -1.25
NUP54-207ENST00000508583 SURF2Q15527 256 aaPredicted RBP7.24□□□□□ -1.25
NUP54-207ENST00000508583 C2orf68Q2NKX9 166 aa7.24□□□□□ -1.25
NUP54-207ENST00000508583 SCGB2B2Q4G0G5 96 aa7.24□□□□□ -1.25
NUP54-207ENST00000508583 FBLN7Q53RD9 439 aa7.24□□□□□ -1.25
NUP54-207ENST00000508583 TRIQKQ629K1 86 aa7.24□□□□□ -1.25
NUP54-207ENST00000508583 TREML4Q6UXN2 200 aa7.24□□□□□ -1.25
NUP54-207ENST00000508583 PPP1R27Q86WC6 154 aa7.24□□□□□ -1.25
NUP54-207ENST00000508583 TOMM5Q8N4H5 51 aa7.24□□□□□ -1.25
NUP54-207ENST00000508583 CCDC71LQ8N9Z2 235 aa7.24□□□□□ -1.25
NUP54-207ENST00000508583 TEX45Q8NA69 505 aa7.24□□□□□ -1.25
NUP54-207ENST00000508583 TERB2Q8NHR7 220 aa7.24□□□□□ -1.25
NUP54-207ENST00000508583 C5orf30Q96GV9 206 aa7.24□□□□□ -1.25
NUP54-207ENST00000508583 TINAGL1Q9GZM7 467 aaPredicted RBP7.24□□□□□ -1.25
NUP54-207ENST00000508583 FXYD6Q9H0Q3 95 aa7.24□□□□□ -1.25
NUP54-207ENST00000508583 OR51J1Q9H342 316 aa7.24□□□□□ -1.25
NUP54-207ENST00000508583 PLEKHA2Q9HB19 425 aa7.24□□□□□ -1.25
NUP54-207ENST00000508583 FAM212BQ9NTI7 297 aaPredicted RBP7.24□□□□□ -1.25
NUP54-207ENST00000508583 SIGLEC9Q9Y336 463 aa7.24□□□□□ -1.25
NUP54-207ENST00000508583 V9GYH0 126 aa7.24□□□□□ -1.25
NUP54-207ENST00000508583 PIGBOS1A0A0B4J2F0 54 aa7.23□□□□□ -1.25
NUP54-207ENST00000508583 A6NHS1 94 aa7.23□□□□□ -1.25
NUP54-207ENST00000508583 TNFSF12O43508 249 aa7.23□□□□□ -1.25
NUP54-207ENST00000508583 ATG12O94817 140 aa7.23□□□□□ -1.25
NUP54-207ENST00000508583 CNIH1O95406 144 aa7.23□□□□□ -1.25
NUP54-207ENST00000508583 HPRT1P00492 218 aa7.23□□□□□ -1.25
NUP54-207ENST00000508583 RLN1P04808 185 aa7.23□□□□□ -1.25
NUP54-207ENST00000508583 NQO2P16083 231 aa7.23□□□□□ -1.25
NUP54-207ENST00000508583 TAS2R31P59538 309 aa7.23□□□□□ -1.25
NUP54-207ENST00000508583 EIF4EBP1Q13541 118 aaPredicted RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms