RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 FGF12P61328 243 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 HERVK_113P61574 105 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 PSG6Q00889 435 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 ZNF90Q03938 601 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 FMODQ06828 376 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 FOXL1Q12952 345 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 MLLT11Q13015 90 aaPredicted RBP2.51□□□□□ -2.01
NEDD4-208ENST00000508342 ZNF691Q5VV52 312 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 PDPNQ86YL7 162 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 B9D1Q9UPM9 204 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 LINC00862A6NCI5 91 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 CXorf65A6NEN9 183 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 FAM24AA6NFZ4 105 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 KIAA1324LA8MWY0 1029 aaPredicted RBP2.51□□□□□ -2.01
NEDD4-208ENST00000508342 E5RGE8 158 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 NME4O00746 187 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 LYRM1O43325 122 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 ZNF354AO60765 605 aaPredicted RBP2.51□□□□□ -2.01
NEDD4-208ENST00000508342 DHRS3O75911 302 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 S1PR2O95136 353 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 CRPP02741 224 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 TRGV3P03979 118 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 HCCSP53701 268 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 ERVFC1-1P60608 527 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 SAMD5Q5TGI4 173 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 PRSS3P2Q8NHM4 247 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 LGALS14Q8TCE9 139 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 KLF14Q8TD94 323 aaPredicted RBP2.51□□□□□ -2.01
NEDD4-208ENST00000508342 GPX8Q8TED1 209 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 MCRIP2Q9BUT9 160 aaKnown RBP2.51□□□□□ -2.01
NEDD4-208ENST00000508342 FUNDC2Q9BWH2 189 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 TMPRSS5Q9H3S3 457 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 EMCNQ9ULC0 261 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 A0A0B4J2A0 478 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 FCMRO60667 390 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 HPXP02790 462 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 RPL27AP46776 148 aaKnown RBP2.51□□□□□ -2.01
NEDD4-208ENST00000508342 SSBP2P81877 361 aaPredicted RBP2.51□□□□□ -2.01
NEDD4-208ENST00000508342 LCN15Q6UWW0 184 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 TMEM182Q6ZP80 229 aaPredicted RBP2.51□□□□□ -2.01
NEDD4-208ENST00000508342 TMEM116Q8NCL8 245 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 MRPL24Q96A35 216 aaKnown RBP2.51□□□□□ -2.01
NEDD4-208ENST00000508342 DERL3Q96Q80 235 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 SLC25A33Q9BSK2 321 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 CABLES2Q9BTV7 478 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 SHPKQ9UHJ6 478 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 PHF3Q92576 2039 aaKnown RBP2.51□□□□□ -2.01
NEDD4-208ENST00000508342 PITX3O75364 302 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 NGFRP08138 427 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 CGB3P0DN86 165 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 PAX1P15863 534 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 CTLA4P16410 223 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 RPS27P42677 84 aaKnown RBP2.51□□□□□ -2.01
NEDD4-208ENST00000508342 CBLN3Q6UW01 205 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 OR8G5Q8NG78 346 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 ORAI1Q96D31 301 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 BBC3Q96PG8 261 aaPredicted RBP2.51□□□□□ -2.01
NEDD4-208ENST00000508342 C19orf24Q9BVV8 132 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 RASL12Q9NYN1 266 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 SLC45A2Q9UMX9 530 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 SOX21Q9Y651 276 aaPredicted RBP2.51□□□□□ -2.01
NEDD4-208ENST00000508342 MTORP42345 2549 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 IGHV3-72A0A0B4J1Y9 119 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 C17orf100A8MU93 164 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 RAB29O14966 203 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 TYMSP04818 313 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 RNF224P0DH78 156 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 MYOD1P15172 320 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 NPPCP23582 126 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 PRDX2P32119 198 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 RPS10P46783 165 aaKnown RBP2.51□□□□□ -2.01
NEDD4-208ENST00000508342 SULT1A2P50226 295 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 TIAL1Q01085 375 aaKnown RBP eCLIP2.51□□□□□ -2.01
NEDD4-208ENST00000508342 ASAH1Q13510 395 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 ZNF181Q2M3W8 571 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 LIAT1Q6ZQX7 453 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 PNKDQ8N490 385 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 KCNRGQ8N5I3 272 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 PXT1Q8NFP0 134 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 SLC26A10Q8NG04 563 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 OR52B4Q8NGK2 314 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 OR2G2Q8NGZ5 317 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 OR2T10Q8NGZ9 312 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 ISOC2Q96AB3 205 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 EEF1AKMT3Q96AZ1 226 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 RSG1Q9BU20 258 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 TLNRD1Q9H1K6 362 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 KCNK15Q9H427 330 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 ZNF385DQ9H6B1 395 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 CMC2Q9NRP2 79 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 NDUFB11Q9NX14 153 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 PRNDQ9UKY0 176 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 WASHC3Q9Y3C0 194 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 WIPI2Q9Y4P8 454 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 A0A1B0GV72 72 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 PSMB11A5LHX3 300 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 PPP5D1E7EU14 171 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 H3BP45 60 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 SAP30O75446 220 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 LHBP01229 141 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms