RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 XGP55808 180 aa9.12□□□□□ -0.95
PDLIM5-210ENST00000508216 NDUFV3P56181 108 aaKnown RBP9.12□□□□□ -0.95
PDLIM5-210ENST00000508216 ZNF121P58317 390 aaPredicted RBP9.12□□□□□ -0.95
PDLIM5-210ENST00000508216 CLRN1P58418 232 aa9.12□□□□□ -0.95
PDLIM5-210ENST00000508216 SLC35E4Q6ICL7 350 aa9.12□□□□□ -0.95
PDLIM5-210ENST00000508216 C1QL2Q7Z5L3 287 aa9.12□□□□□ -0.95
PDLIM5-210ENST00000508216 MEX3DQ86XN8 651 aaKnown RBP9.12□□□□□ -0.95
PDLIM5-210ENST00000508216 TMEM171Q8WVE6 324 aa9.12□□□□□ -0.95
PDLIM5-210ENST00000508216 Q96M85 177 aa9.12□□□□□ -0.95
PDLIM5-210ENST00000508216 OR4C12Q96R67 309 aa9.12□□□□□ -0.95
PDLIM5-210ENST00000508216 PAAF1Q9BRP4 392 aa9.12□□□□□ -0.95
PDLIM5-210ENST00000508216 COL25A1Q9BXS0 654 aaPredicted RBP9.12□□□□□ -0.95
PDLIM5-210ENST00000508216 TMEM191AQ9H0A3 160 aa9.12□□□□□ -0.95
PDLIM5-210ENST00000508216 UBTD1Q9HAC8 227 aa9.12□□□□□ -0.95
PDLIM5-210ENST00000508216 IL36BQ9NZH7 164 aa9.12□□□□□ -0.95
PDLIM5-210ENST00000508216 MDFICQ9P1T7 246 aa9.12□□□□□ -0.95
PDLIM5-210ENST00000508216 A0A1W2PRD5 423 aa9.11□□□□□ -0.95
PDLIM5-210ENST00000508216 A0A1W2PRF3 423 aa9.11□□□□□ -0.95
PDLIM5-210ENST00000508216 A0A1W2PRM7 423 aa9.11□□□□□ -0.95
PDLIM5-210ENST00000508216 H2BFMP0C1H6 154 aa9.11□□□□□ -0.95
PDLIM5-210ENST00000508216 RPS4XP62701 263 aaKnown RBP9.11□□□□□ -0.95
PDLIM5-210ENST00000508216 TNP2Q05952 138 aa9.11□□□□□ -0.95
PDLIM5-210ENST00000508216 ATP5G2Q06055 141 aa9.11□□□□□ -0.95
PDLIM5-210ENST00000508216 RHBDD2Q6NTF9 364 aa9.11□□□□□ -0.95
PDLIM5-210ENST00000508216 TCF23Q7RTU1 214 aa9.11□□□□□ -0.95
PDLIM5-210ENST00000508216 LRRC25Q8N386 305 aaPredicted RBP9.11□□□□□ -0.95
PDLIM5-210ENST00000508216 GVQW1Q8N7I0 195 aa9.11□□□□□ -0.95
PDLIM5-210ENST00000508216 OR5D13Q8NGL4 314 aa9.11□□□□□ -0.95
PDLIM5-210ENST00000508216 OR9G4Q8NGQ1 327 aa9.11□□□□□ -0.95
PDLIM5-210ENST00000508216 C18orf12Q96KH6 178 aa9.11□□□□□ -0.95
PDLIM5-210ENST00000508216 ELOVL3Q9HB03 270 aa9.11□□□□□ -0.95
PDLIM5-210ENST00000508216 HEBP2Q9Y5Z4 205 aa9.11□□□□□ -0.95
PDLIM5-210ENST00000508216 ANAPC1Q9H1A4 1944 aa9.11□□□□□ -0.95
PDLIM5-210ENST00000508216 MDC1Q14676 2089 aaKnown RBP9.1□□□□□ -0.95
PDLIM5-210ENST00000508216 DCDC2BA2VCK2 349 aa9.1□□□□□ -0.95
PDLIM5-210ENST00000508216 J3KT08 172 aa9.1□□□□□ -0.95
PDLIM5-210ENST00000508216 B3GALT2O43825 422 aa9.1□□□□□ -0.95
PDLIM5-210ENST00000508216 ETHE1O95571 254 aa9.1□□□□□ -0.95
PDLIM5-210ENST00000508216 LGALS2P05162 132 aa9.1□□□□□ -0.95
PDLIM5-210ENST00000508216 CBLN1P23435 193 aa9.1□□□□□ -0.95
PDLIM5-210ENST00000508216 PEBP1P30086 187 aaKnown RBP9.1□□□□□ -0.95
PDLIM5-210ENST00000508216 CX3CL1P78423 397 aa9.1□□□□□ -0.95
PDLIM5-210ENST00000508216 PSG4Q00888 419 aa9.1□□□□□ -0.95
PDLIM5-210ENST00000508216 ITPRIPL2Q3MIP1 535 aa9.1□□□□□ -0.95
PDLIM5-210ENST00000508216 FNDC7Q5VTL7 733 aa9.1□□□□□ -0.95
PDLIM5-210ENST00000508216 EBLN2Q6P2I7 272 aa9.1□□□□□ -0.95
PDLIM5-210ENST00000508216 TMEM64Q6YI46 380 aa9.1□□□□□ -0.95
PDLIM5-210ENST00000508216 HFE2Q6ZVN8 426 aa9.1□□□□□ -0.95
PDLIM5-210ENST00000508216 TMEM252Q8N6L7 170 aa9.1□□□□□ -0.95
PDLIM5-210ENST00000508216 ZNF114Q8NC26 417 aa9.1□□□□□ -0.95
PDLIM5-210ENST00000508216 OR4X2Q8NGF9 303 aa9.1□□□□□ -0.95
PDLIM5-210ENST00000508216 GTSF1Q8WW33 167 aa9.1□□□□□ -0.95
PDLIM5-210ENST00000508216 KXD1Q9BQD3 176 aa9.1□□□□□ -0.95
PDLIM5-210ENST00000508216 TXNDC17Q9BRA2 123 aa9.1□□□□□ -0.95
PDLIM5-210ENST00000508216 TAAR2Q9P1P5 351 aa9.1□□□□□ -0.95
PDLIM5-210ENST00000508216 MYO16Q9Y6X6 1858 aa9.1□□□□□ -0.95
PDLIM5-210ENST00000508216 GOLGB1Q14789 3259 aaKnown RBP9.1□□□□□ -0.95
PDLIM5-210ENST00000508216 NUMA1Q14980 2115 aa9.1□□□□□ -0.95
PDLIM5-210ENST00000508216 CPSF4LA6NMK7 179 aaKnown RBP9.09□□□□□ -0.95
PDLIM5-210ENST00000508216 CCDC179H3BU77 68 aa9.09□□□□□ -0.95
PDLIM5-210ENST00000508216 HLA-DQA1P01909 254 aa9.09□□□□□ -0.95
PDLIM5-210ENST00000508216 TAL1P17542 331 aaPredicted RBP9.09□□□□□ -0.95
PDLIM5-210ENST00000508216 CD27P26842 260 aa9.09□□□□□ -0.95
PDLIM5-210ENST00000508216 NTF4P34130 210 aa9.09□□□□□ -0.95
PDLIM5-210ENST00000508216 RPS16P62249 146 aaKnown RBP9.09□□□□□ -0.95
PDLIM5-210ENST00000508216 KLF5Q13887 457 aaPredicted RBP9.09□□□□□ -0.95
PDLIM5-210ENST00000508216 ZNF726P1Q15940 193 aa9.09□□□□□ -0.95
PDLIM5-210ENST00000508216 CDKN3Q16667 212 aa9.09□□□□□ -0.95
PDLIM5-210ENST00000508216 CLEC12BQ2HXU8 276 aa9.09□□□□□ -0.95
PDLIM5-210ENST00000508216 OR4C11Q6IEV9 310 aa9.09□□□□□ -0.95
PDLIM5-210ENST00000508216 LCN12Q6JVE5 192 aa9.09□□□□□ -0.95
PDLIM5-210ENST00000508216 LCN10Q6JVE6 187 aa9.09□□□□□ -0.95
PDLIM5-210ENST00000508216 ATOH7Q8N100 152 aa9.09□□□□□ -0.95
PDLIM5-210ENST00000508216 OSR1Q8TAX0 266 aaPredicted RBP9.09□□□□□ -0.95
PDLIM5-210ENST00000508216 TMEM255BQ8WV15 326 aa9.09□□□□□ -0.95
PDLIM5-210ENST00000508216 C4orf45Q96LM5 186 aa9.09□□□□□ -0.95
PDLIM5-210ENST00000508216 CDX2Q99626 313 aaPredicted RBP9.09□□□□□ -0.95
PDLIM5-210ENST00000508216 PRSS27Q9BQR3 290 aa9.09□□□□□ -0.95
PDLIM5-210ENST00000508216 WDR76Q9H967 626 aa9.09□□□□□ -0.95
PDLIM5-210ENST00000508216 CES1P1Q9UKY3 287 aa9.09□□□□□ -0.95
PDLIM5-210ENST00000508216 PTRH2Q9Y3E5 179 aaKnown RBP9.09□□□□□ -0.95
PDLIM5-210ENST00000508216 LY96Q9Y6Y9 160 aa9.09□□□□□ -0.95
PDLIM5-210ENST00000508216 A0A087X0K7 114 aa9.09□□□□□ -0.95
PDLIM5-210ENST00000508216 TRBV5-4A0A0C4DH59 114 aa9.09□□□□□ -0.95
PDLIM5-210ENST00000508216 UPK3BL1B0FP48 263 aa9.09□□□□□ -0.95
PDLIM5-210ENST00000508216 UPK3BL2E5RIL1 263 aa9.09□□□□□ -0.95
PDLIM5-210ENST00000508216 TMEM262E9PQX1 116 aa9.09□□□□□ -0.95
PDLIM5-210ENST00000508216 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.09□□□□□ -0.95
PDLIM5-210ENST00000508216 PRKNO60260 465 aaPredicted RBP9.09□□□□□ -0.95
PDLIM5-210ENST00000508216 IGHV3-7P01780 117 aa9.09□□□□□ -0.95
PDLIM5-210ENST00000508216 QRFPP83859 136 aa9.09□□□□□ -0.95
PDLIM5-210ENST00000508216 UTF1Q5T230 341 aa9.09□□□□□ -0.95
PDLIM5-210ENST00000508216 PPP1R27Q86WC6 154 aa9.09□□□□□ -0.95
PDLIM5-210ENST00000508216 ZNF480Q8WV37 535 aa9.09□□□□□ -0.95
PDLIM5-210ENST00000508216 RPEQ96AT9 228 aa9.09□□□□□ -0.95
PDLIM5-210ENST00000508216 APOOQ9BUR5 198 aa9.09□□□□□ -0.95
PDLIM5-210ENST00000508216 PRTFDC1Q9NRG1 225 aa9.09□□□□□ -0.95
PDLIM5-210ENST00000508216 PRR13Q9NZ81 148 aa9.09□□□□□ -0.95
PDLIM5-210ENST00000508216 PRO0461Q9UI25 63 aa9.09□□□□□ -0.95
PDLIM5-210ENST00000508216 SOX21Q9Y651 276 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms