RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 LGALS4P56470 323 aa14.34□□□□□ -0.11
SQSTM1-211ENST00000506690 SPATA45Q537H7 98 aa14.34□□□□□ -0.11
SQSTM1-211ENST00000506690 OR1L6Q8NGR2 347 aa14.34□□□□□ -0.11
SQSTM1-211ENST00000506690 ZNF586Q9NXT0 402 aa14.34□□□□□ -0.11
SQSTM1-211ENST00000506690 RARRES3Q9UL19 164 aa14.34□□□□□ -0.11
SQSTM1-211ENST00000506690 GTF3C1Q12789 2109 aa14.33□□□□□ -0.11
SQSTM1-211ENST00000506690 FCN1O00602 326 aa14.33□□□□□ -0.12
SQSTM1-211ENST00000506690 CXCL13O43927 109 aa14.33□□□□□ -0.12
SQSTM1-211ENST00000506690 CCL2P13500 99 aa14.33□□□□□ -0.12
SQSTM1-211ENST00000506690 MRPL14Q6P1L8 145 aaKnown RBP14.33□□□□□ -0.12
SQSTM1-211ENST00000506690 ZNF497Q6ZNH5 498 aa14.33□□□□□ -0.12
SQSTM1-211ENST00000506690 UBALD1Q8TB05 177 aa14.33□□□□□ -0.12
SQSTM1-211ENST00000506690 GAL3ST2Q9H3Q3 398 aa14.33□□□□□ -0.12
SQSTM1-211ENST00000506690 WDR83OSQ9Y284 106 aa14.33□□□□□ -0.12
SQSTM1-211ENST00000506690 SCO2A0A1W2PP80 73 aa14.33□□□□□ -0.12
SQSTM1-211ENST00000506690 OR5G3P0C626 314 aa14.33□□□□□ -0.12
SQSTM1-211ENST00000506690 IGLC2P0DOY2 106 aa14.33□□□□□ -0.12
SQSTM1-211ENST00000506690 IGLC3P0DOY3 106 aa14.33□□□□□ -0.12
SQSTM1-211ENST00000506690 KRTDAPP60985 99 aa14.33□□□□□ -0.12
SQSTM1-211ENST00000506690 SUMO1P63165 101 aaKnown RBP14.33□□□□□ -0.12
SQSTM1-211ENST00000506690 HLA-DRB5Q30154 266 aa14.33□□□□□ -0.12
SQSTM1-211ENST00000506690 SAPCD1Q5SSQ6 148 aa14.33□□□□□ -0.12
SQSTM1-211ENST00000506690 LOC102723996A0A087X1L8 192 aa14.32□□□□□ -0.12
SQSTM1-211ENST00000506690 C5orf49A4QMS7 147 aa14.32□□□□□ -0.12
SQSTM1-211ENST00000506690 HNF1AP20823 631 aa14.32□□□□□ -0.12
SQSTM1-211ENST00000506690 PSG7Q13046 419 aa14.32□□□□□ -0.12
SQSTM1-211ENST00000506690 LEMD1Q68G75 181 aa14.32□□□□□ -0.12
SQSTM1-211ENST00000506690 YRDCQ86U90 279 aaKnown RBP14.32□□□□□ -0.12
SQSTM1-211ENST00000506690 KCNE4Q8WWG9 221 aa14.32□□□□□ -0.12
SQSTM1-211ENST00000506690 GNB4Q9HAV0 340 aa14.32□□□□□ -0.12
SQSTM1-211ENST00000506690 LAMTOR2Q9Y2Q5 125 aa14.32□□□□□ -0.12
SQSTM1-211ENST00000506690 CABIN1Q9Y6J0 2220 aa14.32□□□□□ -0.12
SQSTM1-211ENST00000506690 TRBV9A0A0B4J1U6 114 aa14.32□□□□□ -0.12
SQSTM1-211ENST00000506690 A0A1W2PPV4 95 aa14.32□□□□□ -0.12
SQSTM1-211ENST00000506690 NKX6-3A6NJ46 265 aa14.32□□□□□ -0.12
SQSTM1-211ENST00000506690 K7EN84 100 aa14.32□□□□□ -0.12
SQSTM1-211ENST00000506690 SLC17A3O00476 420 aa14.32□□□□□ -0.12
SQSTM1-211ENST00000506690 HYPMO75409 117 aa14.32□□□□□ -0.12
SQSTM1-211ENST00000506690 CYC1P08574 325 aa14.32□□□□□ -0.12
SQSTM1-211ENST00000506690 FRMD6-AS1P0C7T7 363 aa14.32□□□□□ -0.12
SQSTM1-211ENST00000506690 IER3P46695 156 aa14.32□□□□□ -0.12
SQSTM1-211ENST00000506690 SSR4P51571 173 aa14.32□□□□□ -0.12
SQSTM1-211ENST00000506690 KLF3P57682 345 aaPredicted RBP14.32□□□□□ -0.12
SQSTM1-211ENST00000506690 TRAPPC2LQ9UL33 140 aa14.32□□□□□ -0.12
SQSTM1-211ENST00000506690 TBL2Q9Y4P3 447 aaKnown RBP14.32□□□□□ -0.12
SQSTM1-211ENST00000506690 SAA2-SAA4A0A096LPE2 208 aa14.31□□□□□ -0.12
SQSTM1-211ENST00000506690 ITGB1BP1O14713 200 aa14.31□□□□□ -0.12
SQSTM1-211ENST00000506690 SH2D1BO14796 132 aa14.31□□□□□ -0.12
SQSTM1-211ENST00000506690 SPINK2P20155 84 aa14.31□□□□□ -0.12
SQSTM1-211ENST00000506690 PTTG1IPP53801 180 aa14.31□□□□□ -0.12
SQSTM1-211ENST00000506690 RPL30P62888 115 aaKnown RBP14.31□□□□□ -0.12
SQSTM1-211ENST00000506690 ZNF816Q0VGE8 651 aaPredicted RBP14.31□□□□□ -0.12
SQSTM1-211ENST00000506690 EIF4EBP1Q13541 118 aaPredicted RBP14.31□□□□□ -0.12
SQSTM1-211ENST00000506690 ZNF645Q8N7E2 425 aa14.31□□□□□ -0.12
SQSTM1-211ENST00000506690 C22orf15Q8WYQ4 148 aa14.31□□□□□ -0.12
SQSTM1-211ENST00000506690 IMMP1LQ96LU5 166 aa14.31□□□□□ -0.12
SQSTM1-211ENST00000506690 FAM103A1Q9BTL3 118 aaKnown RBP14.31□□□□□ -0.12
SQSTM1-211ENST00000506690 GNB1LQ9BYB4 327 aa14.31□□□□□ -0.12
SQSTM1-211ENST00000506690 PRRG4Q9BZD6 226 aa14.31□□□□□ -0.12
SQSTM1-211ENST00000506690 NRN1Q9NPD7 142 aa14.31□□□□□ -0.12
SQSTM1-211ENST00000506690 MBNL3Q9NUK0 354 aaKnown RBP14.31□□□□□ -0.12
SQSTM1-211ENST00000506690 IGHV1-45A0A0A0MS14 117 aa14.31□□□□□ -0.12
SQSTM1-211ENST00000506690 SNURFLB1AK76 121 aa14.31□□□□□ -0.12
SQSTM1-211ENST00000506690 RHBDL1O75783 438 aa14.31□□□□□ -0.12
SQSTM1-211ENST00000506690 WISP2O76076 250 aa14.31□□□□□ -0.12
SQSTM1-211ENST00000506690 S1PR2O95136 353 aa14.31□□□□□ -0.12
SQSTM1-211ENST00000506690 IGHV3-9P01782 118 aa14.31□□□□□ -0.12
SQSTM1-211ENST00000506690 STAG3L2P0CL84 134 aa14.31□□□□□ -0.12
SQSTM1-211ENST00000506690 STAG3L3P0CL85 134 aa14.31□□□□□ -0.12
SQSTM1-211ENST00000506690 ARL14EPLP0DKL9 152 aa14.31□□□□□ -0.12
SQSTM1-211ENST00000506690 SRD5A2P31213 254 aa14.31□□□□□ -0.12
SQSTM1-211ENST00000506690 ZBTB34Q8NCN2 500 aa14.31□□□□□ -0.12
SQSTM1-211ENST00000506690 OR2M7Q8NG81 312 aa14.31□□□□□ -0.12
SQSTM1-211ENST00000506690 OR10D3Q8NH80 312 aa14.31□□□□□ -0.12
SQSTM1-211ENST00000506690 STARD4Q96DR4 205 aa14.31□□□□□ -0.12
SQSTM1-211ENST00000506690 SFXN3Q9BWM7 321 aa14.31□□□□□ -0.12
SQSTM1-211ENST00000506690 NCKAP5O14513 1909 aa14.31□□□□□ -0.12
SQSTM1-211ENST00000506690 ESPL1Q14674 2120 aa14.3□□□□□ -0.12
SQSTM1-211ENST00000506690 OR5B21A6NL26 309 aa14.3□□□□□ -0.12
SQSTM1-211ENST00000506690 NGFP01138 241 aa14.3□□□□□ -0.12
SQSTM1-211ENST00000506690 CD1BP29016 333 aa14.3□□□□□ -0.12
SQSTM1-211ENST00000506690 EDDM3BP56851 147 aa14.3□□□□□ -0.12
SQSTM1-211ENST00000506690 BRWD1-AS2P59051 145 aa14.3□□□□□ -0.12
SQSTM1-211ENST00000506690 GNG3P63215 75 aa14.3□□□□□ -0.12
SQSTM1-211ENST00000506690 COTL1Q14019 142 aa14.3□□□□□ -0.12
SQSTM1-211ENST00000506690 CADM4Q8NFZ8 388 aa14.3□□□□□ -0.12
SQSTM1-211ENST00000506690 C5orf30Q96GV9 206 aa14.3□□□□□ -0.12
SQSTM1-211ENST00000506690 PKIBQ9C010 78 aa14.3□□□□□ -0.12
SQSTM1-211ENST00000506690 USF3Q68DE3 2245 aa14.3□□□□□ -0.12
SQSTM1-211ENST00000506690 C15orf62A8K5M9 175 aa14.3□□□□□ -0.12
SQSTM1-211ENST00000506690 K7EP13 123 aa14.3□□□□□ -0.12
SQSTM1-211ENST00000506690 ZNF253O75346 499 aa14.3□□□□□ -0.12
SQSTM1-211ENST00000506690 TOMM40O96008 361 aa14.3□□□□□ -0.12
SQSTM1-211ENST00000506690 Q6ZN92 141 aa14.3□□□□□ -0.12
SQSTM1-211ENST00000506690 ABHD3Q8WU67 409 aa14.3□□□□□ -0.12
SQSTM1-211ENST00000506690 TMEM204Q9BSN7 226 aa14.3□□□□□ -0.12
SQSTM1-211ENST00000506690 RAB29O14966 203 aa14.29□□□□□ -0.12
SQSTM1-211ENST00000506690 HNRNPA3P51991 378 aaKnown RBP14.29□□□□□ -0.12
SQSTM1-211ENST00000506690 ZNF718Q3SXZ3 478 aa14.29□□□□□ -0.12
SQSTM1-211ENST00000506690 OR10J3Q5JRS4 329 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms