RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 A0A096LPI6 279 aa3.37□□□□□ -1.87
HERC4-213ENST00000506515 TRAV40A0A0B4J280 105 aa3.37□□□□□ -1.87
HERC4-213ENST00000506515 PGRMC1O00264 195 aaKnown RBP3.37□□□□□ -1.87
HERC4-213ENST00000506515 SHOX2O60902 331 aaPredicted RBP3.37□□□□□ -1.87
HERC4-213ENST00000506515 SERPINB7O75635 380 aa3.37□□□□□ -1.87
HERC4-213ENST00000506515 LY6HO94772 140 aa3.37□□□□□ -1.87
HERC4-213ENST00000506515 KCNK2O95069 426 aa3.37□□□□□ -1.87
HERC4-213ENST00000506515 KLHL2O95198 593 aa3.37□□□□□ -1.87
HERC4-213ENST00000506515 GUSBP08236 651 aa3.37□□□□□ -1.87
HERC4-213ENST00000506515 TAC1P20366 129 aa3.37□□□□□ -1.87
HERC4-213ENST00000506515 IVDP26440 423 aa3.37□□□□□ -1.87
HERC4-213ENST00000506515 HTR1DP28221 377 aa3.37□□□□□ -1.87
HERC4-213ENST00000506515 MYCNOSP40205 109 aa3.37□□□□□ -1.87
HERC4-213ENST00000506515 BCAP31P51572 246 aa3.37□□□□□ -1.87
HERC4-213ENST00000506515 CAV1Q03135 178 aa3.37□□□□□ -1.87
HERC4-213ENST00000506515 OR4D1Q15615 310 aa3.37□□□□□ -1.87
HERC4-213ENST00000506515 LY6EQ16553 131 aa3.37□□□□□ -1.87
HERC4-213ENST00000506515 C18orf21Q32NC0 220 aaPredicted RBP3.37□□□□□ -1.87
HERC4-213ENST00000506515 CASP12Q6UXS9 341 aa3.37□□□□□ -1.87
HERC4-213ENST00000506515 C3orf62Q6ZUJ4 267 aa3.37□□□□□ -1.87
HERC4-213ENST00000506515 AAED1Q7RTV5 226 aa3.37□□□□□ -1.87
HERC4-213ENST00000506515 GRINAQ7Z429 371 aa3.37□□□□□ -1.87
HERC4-213ENST00000506515 SIGLECL1Q8N7X8 197 aa3.37□□□□□ -1.87
HERC4-213ENST00000506515 GPR119Q8TDV5 335 aa3.37□□□□□ -1.87
HERC4-213ENST00000506515 C16orf78Q8WTQ4 265 aa3.37□□□□□ -1.87
HERC4-213ENST00000506515 C11orf40Q8WZ69 217 aa3.37□□□□□ -1.87
HERC4-213ENST00000506515 ZNF75CPQ92670 426 aaPredicted RBP3.37□□□□□ -1.87
HERC4-213ENST00000506515 ISOC2Q96AB3 205 aa3.37□□□□□ -1.87
HERC4-213ENST00000506515 SLC25A46Q96AG3 418 aa3.37□□□□□ -1.87
HERC4-213ENST00000506515 CHMP6Q96FZ7 201 aa3.37□□□□□ -1.87
HERC4-213ENST00000506515 LINC00470Q9BZP3 86 aa3.37□□□□□ -1.87
HERC4-213ENST00000506515 ARMC7Q9H6L4 198 aa3.37□□□□□ -1.87
HERC4-213ENST00000506515 ACER3Q9NUN7 267 aa3.37□□□□□ -1.87
HERC4-213ENST00000506515 TFR2Q9UP52 801 aa3.37□□□□□ -1.87
HERC4-213ENST00000506515 CMYA5Q8N3K9 4069 aa3.36□□□□□ -1.87
HERC4-213ENST00000506515 IGHV1-18A0A0C4DH31 117 aa3.36□□□□□ -1.87
HERC4-213ENST00000506515 IGHV1-69-2A0A0G2JMI3 117 aa3.36□□□□□ -1.87
HERC4-213ENST00000506515 ZNF850A8MQ14 1090 aa3.36□□□□□ -1.87
HERC4-213ENST00000506515 SERPINE3A8MV23 424 aa3.36□□□□□ -1.87
HERC4-213ENST00000506515 ZNF99A8MXY4 864 aaPredicted RBP3.36□□□□□ -1.87
HERC4-213ENST00000506515 C3orf84H3BNL1 204 aa3.36□□□□□ -1.87
HERC4-213ENST00000506515 RPL36A-HNRNPH2H7BZ11 118 aa3.36□□□□□ -1.87
HERC4-213ENST00000506515 TNFRSF11BO00300 401 aa3.36□□□□□ -1.87
HERC4-213ENST00000506515 PSMG1O95456 288 aa3.36□□□□□ -1.87
HERC4-213ENST00000506515 PAHP00439 452 aa3.36□□□□□ -1.87
HERC4-213ENST00000506515 CSTAP01040 98 aa3.36□□□□□ -1.87
HERC4-213ENST00000506515 PDYNP01213 254 aa3.36□□□□□ -1.87
HERC4-213ENST00000506515 IGHV3-11P01762 117 aa3.36□□□□□ -1.87
HERC4-213ENST00000506515 CD74P04233 296 aa3.36□□□□□ -1.87
HERC4-213ENST00000506515 IL4P05112 153 aa3.36□□□□□ -1.87
HERC4-213ENST00000506515 IL3P08700 152 aa3.36□□□□□ -1.87
HERC4-213ENST00000506515 OR2B6P58173 313 aa3.36□□□□□ -1.87
HERC4-213ENST00000506515 COPZ1P61923 177 aa3.36□□□□□ -1.87
HERC4-213ENST00000506515 H3F3AP84243 136 aa3.36□□□□□ -1.87
HERC4-213ENST00000506515 ZNF816Q0VGE8 651 aaPredicted RBP3.36□□□□□ -1.87
HERC4-213ENST00000506515 FOXF1Q12946 379 aa3.36□□□□□ -1.87
HERC4-213ENST00000506515 SLC9A3R2Q15599 337 aa3.36□□□□□ -1.87
HERC4-213ENST00000506515 IMPG1Q17R60 797 aa3.36□□□□□ -1.87
HERC4-213ENST00000506515 FBXO48Q5FWF7 155 aa3.36□□□□□ -1.87
HERC4-213ENST00000506515 CTAGE3PQ8IX95 158 aa3.36□□□□□ -1.87
HERC4-213ENST00000506515 RNF182Q8N6D2 247 aa3.36□□□□□ -1.87
HERC4-213ENST00000506515 FBXO36Q8NEA4 188 aa3.36□□□□□ -1.87
HERC4-213ENST00000506515 C19orf18Q8NEA5 215 aa3.36□□□□□ -1.87
HERC4-213ENST00000506515 OR4S1Q8NGB4 309 aa3.36□□□□□ -1.87
HERC4-213ENST00000506515 OR13G1Q8NGZ3 307 aa3.36□□□□□ -1.87
HERC4-213ENST00000506515 RXFP4Q8TDU9 374 aa3.36□□□□□ -1.87
HERC4-213ENST00000506515 GHSRQ92847 366 aa3.36□□□□□ -1.87
HERC4-213ENST00000506515 MRPL57Q9BQC6 102 aaKnown RBP3.36□□□□□ -1.87
HERC4-213ENST00000506515 BCL2L14Q9BZR8 327 aa3.36□□□□□ -1.87
HERC4-213ENST00000506515 EXOSC4Q9NPD3 245 aaKnown RBP3.36□□□□□ -1.87
HERC4-213ENST00000506515 OR5V1Q9UGF6 321 aa3.36□□□□□ -1.87
HERC4-213ENST00000506515 OBSCNQ5VST9 7968 aa3.36□□□□□ -1.87
HERC4-213ENST00000506515 RYR3Q15413 4870 aa3.36□□□□□ -1.87
HERC4-213ENST00000506515 IGLV2-18A0A075B6J9 118 aa3.35□□□□□ -1.87
HERC4-213ENST00000506515 IGKV1-27A0A075B6S5 117 aa3.35□□□□□ -1.87
HERC4-213ENST00000506515 TRAV6A0A075B6T7 132 aa3.35□□□□□ -1.87
HERC4-213ENST00000506515 IGHV7-4-1A0A0J9YVY3 117 aa3.35□□□□□ -1.87
HERC4-213ENST00000506515 TMEM114B3SHH9 223 aa3.35□□□□□ -1.87
HERC4-213ENST00000506515 OR2T1O43869 369 aa3.35□□□□□ -1.87
HERC4-213ENST00000506515 RBBP9O75884 186 aa3.35□□□□□ -1.87
HERC4-213ENST00000506515 UBL3O95164 117 aa3.35□□□□□ -1.87
HERC4-213ENST00000506515 RAB36O95755 333 aa3.35□□□□□ -1.87
HERC4-213ENST00000506515 CECR9P0C854 216 aa3.35□□□□□ -1.87
HERC4-213ENST00000506515 CXCR1P25024 350 aa3.35□□□□□ -1.87
HERC4-213ENST00000506515 COL8A2P25067 703 aa3.35□□□□□ -1.87
HERC4-213ENST00000506515 PHBP35232 272 aa3.35□□□□□ -1.87
HERC4-213ENST00000506515 TGFBR2P37173 567 aa3.35□□□□□ -1.87
HERC4-213ENST00000506515 POLR2HP52434 150 aaKnown RBP3.35□□□□□ -1.87
HERC4-213ENST00000506515 KLF3P57682 345 aaPredicted RBP3.35□□□□□ -1.87
HERC4-213ENST00000506515 TMEM155Q4W5P6 130 aa3.35□□□□□ -1.87
HERC4-213ENST00000506515 KPRPQ5T749 579 aaPredicted RBP3.35□□□□□ -1.87
HERC4-213ENST00000506515 C5orf46Q6UWT4 87 aa3.35□□□□□ -1.87
HERC4-213ENST00000506515 HMGN2P46Q86SG4 172 aa3.35□□□□□ -1.87
HERC4-213ENST00000506515 MDP1Q86V88 176 aa3.35□□□□□ -1.87
HERC4-213ENST00000506515 OR52E4Q8NGH9 312 aa3.35□□□□□ -1.87
HERC4-213ENST00000506515 PPCDCQ96CD2 204 aa3.35□□□□□ -1.87
HERC4-213ENST00000506515 NAPGQ99747 312 aaPredicted RBP3.35□□□□□ -1.87
HERC4-213ENST00000506515 RGCCQ9H4X1 137 aa3.35□□□□□ -1.87
HERC4-213ENST00000506515 CACYBPQ9HB71 228 aaKnown RBP3.35□□□□□ -1.87
HERC4-213ENST00000506515 RHBDL2Q9NX52 303 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms