RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 PCNX3Q9H6A9 2034 aa11.87□□□□□ -0.51
TCOF1-207ENST00000504761 IGHV3OR16-10A0A075B7F0 116 aa11.86□□□□□ -0.51
TCOF1-207ENST00000504761 ZNF503-AS2A6NEH8 195 aa11.86□□□□□ -0.51
TCOF1-207ENST00000504761 ERVH48-1M5A8F1 160 aa11.86□□□□□ -0.51
TCOF1-207ENST00000504761 SIGIRRQ6IA17 410 aa11.86□□□□□ -0.51
TCOF1-207ENST00000504761 HS3ST6Q96QI5 342 aa11.86□□□□□ -0.51
TCOF1-207ENST00000504761 A0A0C4DFX4 3053 aa11.86□□□□□ -0.51
TCOF1-207ENST00000504761 C17orf98A8MV24 154 aa11.86□□□□□ -0.51
TCOF1-207ENST00000504761 K7EM74 188 aa11.86□□□□□ -0.51
TCOF1-207ENST00000504761 NDUFA2O43678 99 aa11.86□□□□□ -0.51
TCOF1-207ENST00000504761 PSPNO60542 156 aa11.86□□□□□ -0.51
TCOF1-207ENST00000504761 HLA-GP17693 338 aa11.86□□□□□ -0.51
TCOF1-207ENST00000504761 ERVFRD-1P60508 538 aa11.86□□□□□ -0.51
TCOF1-207ENST00000504761 S100A12P80511 92 aa11.86□□□□□ -0.51
TCOF1-207ENST00000504761 TMEM41BQ5BJD5 291 aa11.86□□□□□ -0.51
TCOF1-207ENST00000504761 PDZD11Q5EBL8 140 aa11.86□□□□□ -0.51
TCOF1-207ENST00000504761 ZP3P21754 424 aa11.86□□□□□ -0.51
TCOF1-207ENST00000504761 S100A7P31151 101 aa11.86□□□□□ -0.51
TCOF1-207ENST00000504761 B2MP61769 119 aa11.86□□□□□ -0.51
TCOF1-207ENST00000504761 NHLH1Q02575 133 aa11.86□□□□□ -0.51
TCOF1-207ENST00000504761 OR1B1Q8NGR6 318 aa11.86□□□□□ -0.51
TCOF1-207ENST00000504761 RNASE6Q93091 150 aaKnown RBP11.86□□□□□ -0.51
TCOF1-207ENST00000504761 PFDN5Q99471 154 aa11.86□□□□□ -0.51
TCOF1-207ENST00000504761 COA4Q9NYJ1 87 aa11.86□□□□□ -0.51
TCOF1-207ENST00000504761 ANKRD11Q6UB99 2663 aaPredicted RBP11.86□□□□□ -0.51
TCOF1-207ENST00000504761 NCOA6Q14686 2063 aaPredicted RBP11.86□□□□□ -0.51
TCOF1-207ENST00000504761 MBD3L4A6NDZ8 208 aaPredicted RBP11.86□□□□□ -0.51
TCOF1-207ENST00000504761 MBD3L3A6NE82 208 aaPredicted RBP11.86□□□□□ -0.51
TCOF1-207ENST00000504761 RBFOX3A6NFN3 312 aa11.86□□□□□ -0.51
TCOF1-207ENST00000504761 MBD3L5A6NJ08 208 aaPredicted RBP11.86□□□□□ -0.51
TCOF1-207ENST00000504761 PPP5D1E7EU14 171 aa11.86□□□□□ -0.51
TCOF1-207ENST00000504761 FAM209AQ5JX71 171 aa11.86□□□□□ -0.51
TCOF1-207ENST00000504761 DHRS11Q6UWP2 260 aa11.86□□□□□ -0.51
TCOF1-207ENST00000504761 PNKDQ8N490 385 aa11.86□□□□□ -0.51
TCOF1-207ENST00000504761 MBD3L2Q8NHZ7 208 aaPredicted RBP11.86□□□□□ -0.51
TCOF1-207ENST00000504761 FHITP49789 147 aa11.85□□□□□ -0.51
TCOF1-207ENST00000504761 RHOBP62745 196 aa11.85□□□□□ -0.51
TCOF1-207ENST00000504761 LAMTOR1Q6IAA8 161 aa11.85□□□□□ -0.51
TCOF1-207ENST00000504761 SLC24A4Q8NFF2 622 aa11.85□□□□□ -0.51
TCOF1-207ENST00000504761 OR4P4Q8NGL7 312 aa11.85□□□□□ -0.51
TCOF1-207ENST00000504761 OR2T6Q8NHC8 308 aa11.85□□□□□ -0.51
TCOF1-207ENST00000504761 SAMD10Q9BYL1 202 aa11.85□□□□□ -0.51
TCOF1-207ENST00000504761 TLNRD1Q9H1K6 362 aa11.85□□□□□ -0.51
TCOF1-207ENST00000504761 TMEM218A2RU14 115 aa11.85□□□□□ -0.51
TCOF1-207ENST00000504761 DVL1O14640 695 aa11.85□□□□□ -0.51
TCOF1-207ENST00000504761 HOXA4Q00056 320 aaPredicted RBP11.85□□□□□ -0.51
TCOF1-207ENST00000504761 RSPO1Q2MKA7 263 aaPredicted RBP11.85□□□□□ -0.51
TCOF1-207ENST00000504761 UQCC3Q6UW78 93 aa11.85□□□□□ -0.51
TCOF1-207ENST00000504761 SPSB4Q96A44 273 aa11.85□□□□□ -0.51
TCOF1-207ENST00000504761 OR4C12Q96R67 309 aa11.85□□□□□ -0.51
TCOF1-207ENST00000504761 ZNF729A6NN14 1252 aaPredicted RBP11.85□□□□□ -0.51
TCOF1-207ENST00000504761 K7EQM0 130 aa11.85□□□□□ -0.51
TCOF1-207ENST00000504761 IGHV1-46P01743 117 aa11.85□□□□□ -0.51
TCOF1-207ENST00000504761 GAPDHP04406 335 aaKnown RBP11.85□□□□□ -0.51
TCOF1-207ENST00000504761 SEC11BP0C7V7 166 aa11.85□□□□□ -0.51
TCOF1-207ENST00000504761 CSN1S1P47710 185 aa11.85□□□□□ -0.51
TCOF1-207ENST00000504761 ZNF90Q03938 601 aa11.85□□□□□ -0.51
TCOF1-207ENST00000504761 ECSCRQ19T08 205 aa11.85□□□□□ -0.51
TCOF1-207ENST00000504761 UNQ6494/PRO21346Q6UXR6 183 aa11.85□□□□□ -0.51
TCOF1-207ENST00000504761 FOXL2NBQ6ZUU3 175 aa11.85□□□□□ -0.51
TCOF1-207ENST00000504761 H1FOOQ8IZA3 346 aaPredicted RBP11.85□□□□□ -0.51
TCOF1-207ENST00000504761 LY86O95711 162 aa11.84□□□□□ -0.51
TCOF1-207ENST00000504761 COX6B1P14854 86 aa11.84□□□□□ -0.51
TCOF1-207ENST00000504761 CD1BP29016 333 aa11.84□□□□□ -0.51
TCOF1-207ENST00000504761 TNFRSF9Q07011 255 aa11.84□□□□□ -0.51
TCOF1-207ENST00000504761 HSD17B13Q7Z5P4 300 aaPredicted RBP11.84□□□□□ -0.51
TCOF1-207ENST00000504761 COMMD1Q8N668 190 aa11.84□□□□□ -0.51
TCOF1-207ENST00000504761 LURAP1Q96LR2 239 aa11.84□□□□□ -0.51
TCOF1-207ENST00000504761 TMEM204Q9BSN7 226 aa11.84□□□□□ -0.51
TCOF1-207ENST00000504761 RAB19A4D1S5 217 aa11.84□□□□□ -0.51
TCOF1-207ENST00000504761 K7ENP7 123 aa11.84□□□□□ -0.51
TCOF1-207ENST00000504761 HOXD11P31277 338 aaPredicted RBP11.84□□□□□ -0.51
TCOF1-207ENST00000504761 POM121Q96HA1 1249 aa11.84□□□□□ -0.51
TCOF1-207ENST00000504761 RASL11BQ9BPW5 248 aa11.84□□□□□ -0.51
TCOF1-207ENST00000504761 SH3BGRL3Q9H299 93 aa11.84□□□□□ -0.51
TCOF1-207ENST00000504761 AURKAIP1Q9NWT8 199 aaPredicted RBP11.84□□□□□ -0.51
TCOF1-207ENST00000504761 REG1AP05451 166 aa11.84□□□□□ -0.51
TCOF1-207ENST00000504761 RPL8P62917 257 aaKnown RBP11.84□□□□□ -0.51
TCOF1-207ENST00000504761 WDR31Q8NA23 367 aa11.84□□□□□ -0.51
TCOF1-207ENST00000504761 GALNT14Q96FL9 552 aa11.84□□□□□ -0.51
TCOF1-207ENST00000504761 GINS3Q9BRX5 216 aa11.84□□□□□ -0.51
TCOF1-207ENST00000504761 METRNQ9UJH8 293 aa11.84□□□□□ -0.51
TCOF1-207ENST00000504761 TIMM9Q9Y5J7 89 aa11.84□□□□□ -0.51
TCOF1-207ENST00000504761 AQP10Q96PS8 301 aa11.84□□□□□ -0.51
TCOF1-207ENST00000504761 DKK1O94907 266 aa11.83□□□□□ -0.52
TCOF1-207ENST00000504761 SPCS3P61009 180 aa11.83□□□□□ -0.52
TCOF1-207ENST00000504761 USF2Q15853 346 aaPredicted RBP11.83□□□□□ -0.52
TCOF1-207ENST00000504761 TUSC1Q2TAM9 212 aa11.83□□□□□ -0.52
TCOF1-207ENST00000504761 TMEM42Q69YG0 159 aa11.83□□□□□ -0.52
TCOF1-207ENST00000504761 ETFRF1Q6IPR1 90 aa11.83□□□□□ -0.52
TCOF1-207ENST00000504761 OR9G1Q8NH87 305 aa11.83□□□□□ -0.52
TCOF1-207ENST00000504761 RSRP1Q9BUV0 290 aa11.83□□□□□ -0.52
TCOF1-207ENST00000504761 CCDC168Q8NDH2 2452 aa11.83□□□□□ -0.52
TCOF1-207ENST00000504761 TRBV6-7A0A0A0MS04 114 aa11.83□□□□□ -0.52
TCOF1-207ENST00000504761 GNG7O60262 68 aa11.83□□□□□ -0.52
TCOF1-207ENST00000504761 SPINK4O60575 86 aa11.83□□□□□ -0.52
TCOF1-207ENST00000504761 RPL27AP46776 148 aaKnown RBP11.83□□□□□ -0.52
TCOF1-207ENST00000504761 QRFPP83859 136 aa11.83□□□□□ -0.52
TCOF1-207ENST00000504761 PSG5Q15238 335 aa11.83□□□□□ -0.52
TCOF1-207ENST00000504761 LY6G6FQ5SQ64 297 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms