RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 CLDN18P56856 261 aa15.04■□□□□ -0
POLR2J3-209ENST00000504157 PMP22Q01453 160 aa15.04■□□□□ -0
POLR2J3-209ENST00000504157 PRR27Q6MZM9 219 aa15.04■□□□□ -0
POLR2J3-209ENST00000504157 SPSB4Q96A44 273 aa15.04■□□□□ -0
POLR2J3-209ENST00000504157 SPACA9Q96E40 222 aaPredicted RBP15.04■□□□□ -0
POLR2J3-209ENST00000504157 QTRT1Q9BXR0 403 aaKnown RBP15.04■□□□□ -0
POLR2J3-209ENST00000504157 PRDM6Q9NQX0 595 aa15.04■□□□□ -0
POLR2J3-209ENST00000504157 A0A1W2PR80 420 aa15.04■□□□□ -0
POLR2J3-209ENST00000504157 LMO7DNF2Z398 122 aa15.04■□□□□ -0
POLR2J3-209ENST00000504157 CD38P28907 300 aa15.04■□□□□ -0
POLR2J3-209ENST00000504157 STUMQ69YW2 141 aa15.04■□□□□ -0
POLR2J3-209ENST00000504157 OR4P4Q8NGL7 312 aa15.04■□□□□ -0
POLR2J3-209ENST00000504157 OR1K1Q8NGR3 316 aa15.04■□□□□ -0
POLR2J3-209ENST00000504157 PIGCQ92535 297 aa15.04■□□□□ -0
POLR2J3-209ENST00000504157 ZNF837Q96EG3 531 aaPredicted RBP15.04■□□□□ -0
POLR2J3-209ENST00000504157 TMEM147Q9BVK8 224 aa15.04■□□□□ -0
POLR2J3-209ENST00000504157 PMCHP20382 165 aa15.03■□□□□ -0
POLR2J3-209ENST00000504157 DEFB133Q30KQ1 61 aa15.03■□□□□ -0
POLR2J3-209ENST00000504157 ZDHHC23Q8IYP9 409 aa15.03■□□□□ -0
POLR2J3-209ENST00000504157 OR51H1Q8NH63 302 aa15.03■□□□□ -0
POLR2J3-209ENST00000504157 APOBEC3DQ96AK3 386 aaPredicted RBP15.03■□□□□ -0
POLR2J3-209ENST00000504157 FGF21Q9NSA1 209 aa15.03■□□□□ -0
POLR2J3-209ENST00000504157 TMEM38BQ9NVV0 291 aa15.03■□□□□ -0
POLR2J3-209ENST00000504157 TRAV9-2A0A087WT02 112 aa15.02■□□□□ -0
POLR2J3-209ENST00000504157 C2CD4DB7Z1M9 353 aa15.02■□□□□ -0
POLR2J3-209ENST00000504157 TAX1BP3O14907 124 aa15.02■□□□□ -0
POLR2J3-209ENST00000504157 IGKV1-5P01602 117 aa15.02■□□□□ -0
POLR2J3-209ENST00000504157 PRSS12P56730 875 aa15.02■□□□□ -0
POLR2J3-209ENST00000504157 OCC1Q8TAD7 63 aa15.02■□□□□ -0
POLR2J3-209ENST00000504157 RDH5Q92781 318 aa15.02■□□□□ -0
POLR2J3-209ENST00000504157 IL19Q9UHD0 177 aa15.02■□□□□ -0
POLR2J3-209ENST00000504157 NPIPB11E5RHQ5 1161 aa15.02□□□□□ -0.01
POLR2J3-209ENST00000504157 DUX1O43812 170 aa15.02□□□□□ -0.01
POLR2J3-209ENST00000504157 CA2P00918 260 aa15.02□□□□□ -0.01
POLR2J3-209ENST00000504157 GLB1P16278 677 aa15.02□□□□□ -0.01
POLR2J3-209ENST00000504157 ARF6P62330 175 aa15.02□□□□□ -0.01
POLR2J3-209ENST00000504157 RHOBP62745 196 aa15.02□□□□□ -0.01
POLR2J3-209ENST00000504157 C1orf185Q5T7R7 199 aa15.02□□□□□ -0.01
POLR2J3-209ENST00000504157 RCHY1Q96PM5 261 aa15.02□□□□□ -0.01
POLR2J3-209ENST00000504157 TXNDC17Q9BRA2 123 aa15.02□□□□□ -0.01
POLR2J3-209ENST00000504157 TOX4O94842 621 aa15.01□□□□□ -0.01
POLR2J3-209ENST00000504157 MT-ND6P03923 174 aa15.01□□□□□ -0.01
POLR2J3-209ENST00000504157 ZNF32P17041 273 aa15.01□□□□□ -0.01
POLR2J3-209ENST00000504157 BCL3P20749 454 aa15.01□□□□□ -0.01
POLR2J3-209ENST00000504157 APOBEC3AP31941 199 aaPredicted RBP15.01□□□□□ -0.01
POLR2J3-209ENST00000504157 CDC34P49427 236 aaPredicted RBP15.01□□□□□ -0.01
POLR2J3-209ENST00000504157 THBS3P49746 956 aa15.01□□□□□ -0.01
POLR2J3-209ENST00000504157 OR4A47Q6IF82 309 aa15.01□□□□□ -0.01
POLR2J3-209ENST00000504157 MAFAQ8NHW3 353 aaPredicted RBP15.01□□□□□ -0.01
POLR2J3-209ENST00000504157 CPT1CQ8TCG5 803 aa15.01□□□□□ -0.01
POLR2J3-209ENST00000504157 UCN2Q96RP3 112 aa15.01□□□□□ -0.01
POLR2J3-209ENST00000504157 SF3B5Q9BWJ5 86 aaKnown RBP15.01□□□□□ -0.01
POLR2J3-209ENST00000504157 A0A1W2PR77 199 aa15.01□□□□□ -0.01
POLR2J3-209ENST00000504157 SIRPB1O00241 398 aa15.01□□□□□ -0.01
POLR2J3-209ENST00000504157 FRMD6-AS1P0C7T7 363 aa15.01□□□□□ -0.01
POLR2J3-209ENST00000504157 SRD5A2P31213 254 aa15.01□□□□□ -0.01
POLR2J3-209ENST00000504157 VASH2Q86V25 355 aa15.01□□□□□ -0.01
POLR2J3-209ENST00000504157 ATOH7Q8N100 152 aa15.01□□□□□ -0.01
POLR2J3-209ENST00000504157 ZNF596Q8TC21 504 aa15.01□□□□□ -0.01
POLR2J3-209ENST00000504157 PHF7Q9BWX1 381 aaPredicted RBP15.01□□□□□ -0.01
POLR2J3-209ENST00000504157 CHCHD2Q9Y6H1 151 aaPredicted RBP15.01□□□□□ -0.01
POLR2J3-209ENST00000504157 IGHV3-15A0A0B4J1V0 119 aa15□□□□□ -0.01
POLR2J3-209ENST00000504157 VCANP13611 3396 aa15□□□□□ -0.01
POLR2J3-209ENST00000504157 DCAF12Q5T6F0 453 aa15□□□□□ -0.01
POLR2J3-209ENST00000504157 LINC00596Q86U02 117 aa15□□□□□ -0.01
POLR2J3-209ENST00000504157 TNFRSF14Q92956 283 aa15□□□□□ -0.01
POLR2J3-209ENST00000504157 CLDN23Q96B33 292 aa15□□□□□ -0.01
POLR2J3-209ENST00000504157 NPCDR1Q9BY65 106 aa15□□□□□ -0.01
POLR2J3-209ENST00000504157 H0YJW9 148 aa15□□□□□ -0.01
POLR2J3-209ENST00000504157 WDR73Q6P4I2 378 aa15□□□□□ -0.01
POLR2J3-209ENST00000504157 BORCS7Q96B45 105 aa15□□□□□ -0.01
POLR2J3-209ENST00000504157 CLEC7AQ9BXN2 247 aa15□□□□□ -0.01
POLR2J3-209ENST00000504157 OR2H1Q9GZK4 316 aa15□□□□□ -0.01
POLR2J3-209ENST00000504157 SLC17A3O00476 420 aa14.99□□□□□ -0.01
POLR2J3-209ENST00000504157 PCBD1P61457 104 aa14.99□□□□□ -0.01
POLR2J3-209ENST00000504157 RPEL1Q2QD12 228 aa14.99□□□□□ -0.01
POLR2J3-209ENST00000504157 ST6GALNAC3Q8NDV1 305 aa14.99□□□□□ -0.01
POLR2J3-209ENST00000504157 RAB1CQ92928 201 aa14.99□□□□□ -0.01
POLR2J3-209ENST00000504157 SGCZQ96LD1 299 aa14.99□□□□□ -0.01
POLR2J3-209ENST00000504157 ZNF430Q9H8G1 570 aaPredicted RBP14.99□□□□□ -0.01
POLR2J3-209ENST00000504157 DNPH1O43598 174 aa14.98□□□□□ -0.01
POLR2J3-209ENST00000504157 TFF3Q07654 80 aa14.98□□□□□ -0.01
POLR2J3-209ENST00000504157 PSG7Q13046 419 aa14.98□□□□□ -0.01
POLR2J3-209ENST00000504157 FAM71F2Q6NXP2 309 aa14.98□□□□□ -0.01
POLR2J3-209ENST00000504157 C1QTNF5Q9BXJ0 243 aa14.98□□□□□ -0.01
POLR2J3-209ENST00000504157 PRDM14Q9GZV8 571 aa14.98□□□□□ -0.01
POLR2J3-209ENST00000504157 LIN7CQ9NUP9 197 aaKnown RBP14.98□□□□□ -0.01
POLR2J3-209ENST00000504157 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.98□□□□□ -0.01
POLR2J3-209ENST00000504157 J3QR06 171 aa14.98□□□□□ -0.01
POLR2J3-209ENST00000504157 CORTO00230 105 aa14.98□□□□□ -0.01
POLR2J3-209ENST00000504157 RAMP3O60896 148 aa14.98□□□□□ -0.01
POLR2J3-209ENST00000504157 CLDN1O95832 211 aa14.98□□□□□ -0.01
POLR2J3-209ENST00000504157 IGLV2-14P01704 120 aa14.98□□□□□ -0.01
POLR2J3-209ENST00000504157 IGLL1P15814 213 aa14.98□□□□□ -0.01
POLR2J3-209ENST00000504157 LCN12Q6JVE5 192 aa14.98□□□□□ -0.01
POLR2J3-209ENST00000504157 MMD2Q8IY49 270 aa14.98□□□□□ -0.01
POLR2J3-209ENST00000504157 OR1L1Q8NH94 360 aa14.98□□□□□ -0.01
POLR2J3-209ENST00000504157 TSKUQ8WUA8 353 aa14.98□□□□□ -0.01
POLR2J3-209ENST00000504157 MEGF9Q9H1U4 602 aa14.98□□□□□ -0.01
POLR2J3-209ENST00000504157 NAT8BQ9UHF3 227 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms