RNA–Protein interactions for RNA: ENST00000504003.1

ARHGEF28-206, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 539 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-206ENST00000504003 CITED4Q96RK1 184 aa7.48□□□□□ -1.21
ARHGEF28-206ENST00000504003 BEX2Q9BXY8 128 aa7.48□□□□□ -1.21
ARHGEF28-206ENST00000504003 MS4A7Q9GZW8 240 aaPredicted RBP7.48□□□□□ -1.21
ARHGEF28-206ENST00000504003 PARP12Q9H0J9 701 aaKnown RBP7.48□□□□□ -1.21
ARHGEF28-206ENST00000504003 MED28Q9H204 178 aa7.48□□□□□ -1.21
ARHGEF28-206ENST00000504003 BEX1Q9HBH7 125 aa7.48□□□□□ -1.21
ARHGEF28-206ENST00000504003 PRRC2AP48634 2157 aaKnown RBP7.47□□□□□ -1.21
ARHGEF28-206ENST00000504003 CSMD2Q7Z408 3487 aa7.47□□□□□ -1.21
ARHGEF28-206ENST00000504003 CR1P17927 2039 aa7.47□□□□□ -1.21
ARHGEF28-206ENST00000504003 A0A0B4J2A0 478 aa7.47□□□□□ -1.21
ARHGEF28-206ENST00000504003 TMEM238LA0A1B0GVL6 79 aa7.47□□□□□ -1.21
ARHGEF28-206ENST00000504003 DUXBA0A1W2PPF3 345 aa7.47□□□□□ -1.21
ARHGEF28-206ENST00000504003 A8MV72 311 aaPredicted RBP7.47□□□□□ -1.21
ARHGEF28-206ENST00000504003 RBFOX2O43251 390 aaKnown RBP eCLIP7.47□□□□□ -1.211e-29■■■■■ 53.3
ARHGEF28-206ENST00000504003 HPRT1P00492 218 aa7.47□□□□□ -1.21
ARHGEF28-206ENST00000504003 HRASP01112 189 aa7.47□□□□□ -1.21
ARHGEF28-206ENST00000504003 FBP1P09467 338 aa7.47□□□□□ -1.21
ARHGEF28-206ENST00000504003 CD99P14209 185 aa7.47□□□□□ -1.21
ARHGEF28-206ENST00000504003 RIPPLY3P57055 190 aa7.47□□□□□ -1.21
ARHGEF28-206ENST00000504003 KLRD1Q13241 179 aa7.47□□□□□ -1.21
ARHGEF28-206ENST00000504003 RPL39P5Q59GN2 51 aa7.47□□□□□ -1.21
ARHGEF28-206ENST00000504003 LDLRAD3Q86YD5 345 aa7.47□□□□□ -1.21
ARHGEF28-206ENST00000504003 PDPNQ86YL7 162 aa7.47□□□□□ -1.21
ARHGEF28-206ENST00000504003 ODF3L1Q8IXM7 274 aa7.47□□□□□ -1.21
ARHGEF28-206ENST00000504003 PDZD9Q8IXQ8 264 aa7.47□□□□□ -1.21
ARHGEF28-206ENST00000504003 SPAG16Q8N0X2 631 aa7.47□□□□□ -1.21
ARHGEF28-206ENST00000504003 C12orf45Q8N5I9 185 aaPredicted RBP7.47□□□□□ -1.21
ARHGEF28-206ENST00000504003 UXS1Q8NBZ7 420 aa7.47□□□□□ -1.21
ARHGEF28-206ENST00000504003 IL22RA2Q969J5 263 aa7.47□□□□□ -1.21
ARHGEF28-206ENST00000504003 RRNAD1Q96FB5 475 aaKnown RBP7.47□□□□□ -1.21
ARHGEF28-206ENST00000504003 WDR89Q96FK6 387 aaPredicted RBP7.47□□□□□ -1.21
ARHGEF28-206ENST00000504003 TMEM222Q9H0R3 208 aa7.47□□□□□ -1.21
ARHGEF28-206ENST00000504003 OR51J1Q9H342 316 aa7.47□□□□□ -1.21
ARHGEF28-206ENST00000504003 SLC35D1Q9NTN3 355 aa7.47□□□□□ -1.21
ARHGEF28-206ENST00000504003 CACFD1Q9UGQ2 172 aa7.47□□□□□ -1.21
ARHGEF28-206ENST00000504003 SHPKQ9UHJ6 478 aa7.47□□□□□ -1.21
ARHGEF28-206ENST00000504003 NUP50Q9UKX7 468 aa7.47□□□□□ -1.21
ARHGEF28-206ENST00000504003 WASHC3Q9Y3C0 194 aa7.47□□□□□ -1.21
ARHGEF28-206ENST00000504003 C2CD3Q4AC94 2353 aa7.46□□□□□ -1.21
ARHGEF28-206ENST00000504003 A0A0A6YYJ9 748 aa7.46□□□□□ -1.22
ARHGEF28-206ENST00000504003 IGHV1-3A0A0C4DH29 117 aa7.46□□□□□ -1.22
ARHGEF28-206ENST00000504003 C7orf66A4D0T2 115 aa7.46□□□□□ -1.22
ARHGEF28-206ENST00000504003 FCGR3BO75015 233 aa7.46□□□□□ -1.22
ARHGEF28-206ENST00000504003 IGLV2-14P01704 120 aa7.46□□□□□ -1.22
ARHGEF28-206ENST00000504003 OR5AC1P0C628 307 aa7.46□□□□□ -1.22
ARHGEF28-206ENST00000504003 FAM106CPP0CH98 169 aa7.46□□□□□ -1.22
ARHGEF28-206ENST00000504003 CD1BP29016 333 aa7.46□□□□□ -1.22
ARHGEF28-206ENST00000504003 SAA4P35542 130 aa7.46□□□□□ -1.22
ARHGEF28-206ENST00000504003 SRP14P37108 136 aaKnown RBP7.46□□□□□ -1.22
ARHGEF28-206ENST00000504003 AKR1C2P52895 323 aa7.46□□□□□ -1.22
ARHGEF28-206ENST00000504003 SLC9A3R2Q15599 337 aa7.46□□□□□ -1.22
ARHGEF28-206ENST00000504003 SSX2Q16385 188 aa7.46□□□□□ -1.22
ARHGEF28-206ENST00000504003 THOC7Q6I9Y2 204 aaKnown RBP7.46□□□□□ -1.22
ARHGEF28-206ENST00000504003 FAM53AQ6NSI3 398 aaPredicted RBP7.46□□□□□ -1.22
ARHGEF28-206ENST00000504003 OR4C13Q8NGP0 309 aa7.46□□□□□ -1.22
ARHGEF28-206ENST00000504003 VSTM2AQ8TAG5 236 aa7.46□□□□□ -1.22
ARHGEF28-206ENST00000504003 OSR1Q8TAX0 266 aaPredicted RBP7.46□□□□□ -1.22
ARHGEF28-206ENST00000504003 MITD1Q8WV92 249 aa7.46□□□□□ -1.22
ARHGEF28-206ENST00000504003 CAPSLQ8WWF8 208 aa7.46□□□□□ -1.22
ARHGEF28-206ENST00000504003 RBPMSQ93062 196 aaKnown RBP7.46□□□□□ -1.22
ARHGEF28-206ENST00000504003 ST6GALNAC6Q969X2 333 aa7.46□□□□□ -1.22
ARHGEF28-206ENST00000504003 TMEM230Q96A57 120 aa7.46□□□□□ -1.22
ARHGEF28-206ENST00000504003 FLYWCH2Q96CP2 140 aaKnown RBP7.46□□□□□ -1.22
ARHGEF28-206ENST00000504003 SPIN2AQ99865 258 aa7.46□□□□□ -1.22
ARHGEF28-206ENST00000504003 RNF5Q99942 180 aa7.46□□□□□ -1.22
ARHGEF28-206ENST00000504003 SPIN2BQ9BPZ2 258 aa7.46□□□□□ -1.22
ARHGEF28-206ENST00000504003 PLEKHA2Q9HB19 425 aa7.46□□□□□ -1.22
ARHGEF28-206ENST00000504003 YAE1D1Q9NRH1 226 aa7.46□□□□□ -1.22
ARHGEF28-206ENST00000504003 COMMD9Q9P000 198 aa7.46□□□□□ -1.22
ARHGEF28-206ENST00000504003 TMED3Q9Y3Q3 217 aa7.46□□□□□ -1.22
ARHGEF28-206ENST00000504003 HILPDAQ9Y5L2 63 aa7.46□□□□□ -1.22
ARHGEF28-206ENST00000504003 ALG5Q9Y673 324 aa7.46□□□□□ -1.22
ARHGEF28-206ENST00000504003 ARHGAP32A7KAX9 2087 aa7.46□□□□□ -1.22
ARHGEF28-206ENST00000504003 WNK2Q9Y3S1 2297 aa7.45□□□□□ -1.22
ARHGEF28-206ENST00000504003 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.45□□□□□ -1.221e-31■■■■■ 61.5
ARHGEF28-206ENST00000504003 A0A1W2PRD5 423 aa7.45□□□□□ -1.22
ARHGEF28-206ENST00000504003 A0A1W2PRF3 423 aa7.45□□□□□ -1.22
ARHGEF28-206ENST00000504003 A0A1W2PRM7 423 aa7.45□□□□□ -1.22
ARHGEF28-206ENST00000504003 BTBD17A6NE02 478 aa7.45□□□□□ -1.22
ARHGEF28-206ENST00000504003 LY6LH3BQJ8 138 aa7.45□□□□□ -1.22
ARHGEF28-206ENST00000504003 SHOXO15266 292 aa7.45□□□□□ -1.22
ARHGEF28-206ENST00000504003 CDS2O95674 445 aa7.45□□□□□ -1.22
ARHGEF28-206ENST00000504003 CT45A6P0DMU7 189 aa7.45□□□□□ -1.22
ARHGEF28-206ENST00000504003 CT45A5P0DMU8 189 aa7.45□□□□□ -1.22
ARHGEF28-206ENST00000504003 CT45A7P0DMV0 189 aa7.45□□□□□ -1.22
ARHGEF28-206ENST00000504003 VSIG10L2P0DP72 767 aa7.45□□□□□ -1.22
ARHGEF28-206ENST00000504003 NQO2P16083 231 aa7.45□□□□□ -1.22
ARHGEF28-206ENST00000504003 UCP1P25874 307 aa7.45□□□□□ -1.22
ARHGEF28-206ENST00000504003 LPAR6P43657 344 aa7.45□□□□□ -1.22
ARHGEF28-206ENST00000504003 LGALS7P47929 136 aa7.45□□□□□ -1.22
ARHGEF28-206ENST00000504003 REG1BP48304 166 aa7.45□□□□□ -1.22
ARHGEF28-206ENST00000504003 CYCSP99999 105 aaKnown RBP7.45□□□□□ -1.22
ARHGEF28-206ENST00000504003 FBLN7Q53RD9 439 aa7.45□□□□□ -1.22
ARHGEF28-206ENST00000504003 HCP5Q6MZN7 132 aa7.45□□□□□ -1.22
ARHGEF28-206ENST00000504003 RBMS3Q6XE24 437 aaKnown RBP7.45□□□□□ -1.22
ARHGEF28-206ENST00000504003 FAM219AQ8IW50 185 aa7.45□□□□□ -1.22
ARHGEF28-206ENST00000504003 CIARTQ8N365 385 aaPredicted RBP7.45□□□□□ -1.22
ARHGEF28-206ENST00000504003 LRTM2Q8N967 370 aa7.45□□□□□ -1.22
ARHGEF28-206ENST00000504003 DMBX1Q8NFW5 382 aa7.45□□□□□ -1.22
ARHGEF28-206ENST00000504003 OR5AN1Q8NGI8 311 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms