RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 ZNF664Q8N3J9 261 aa12.5□□□□□ -0.41
SNF8-203ENST00000504000 ZNF808Q8N4W9 903 aaPredicted RBP12.5□□□□□ -0.41
SNF8-203ENST00000504000 KLF14Q8TD94 323 aaPredicted RBP12.5□□□□□ -0.41
SNF8-203ENST00000504000 PRO1933Q9H354 126 aa12.5□□□□□ -0.41
SNF8-203ENST00000504000 ZDHHC11Q9H8X9 412 aa12.5□□□□□ -0.41
SNF8-203ENST00000504000 FUT9Q9Y231 359 aa12.5□□□□□ -0.41
SNF8-203ENST00000504000 KIAA2026Q5HYC2 2103 aa12.5□□□□□ -0.41
SNF8-203ENST00000504000 RBFOX2O43251 390 aaKnown RBP eCLIP12.49□□□□□ -0.41
SNF8-203ENST00000504000 OPRK1P41145 380 aa12.49□□□□□ -0.41
SNF8-203ENST00000504000 SPCS3P61009 180 aa12.49□□□□□ -0.41
SNF8-203ENST00000504000 RPL15P61313 204 aaKnown RBP12.49□□□□□ -0.41
SNF8-203ENST00000504000 C1orf210Q8IVY1 113 aa12.49□□□□□ -0.41
SNF8-203ENST00000504000 OBP2BQ9NPH6 170 aa12.49□□□□□ -0.41
SNF8-203ENST00000504000 TP53TG5Q9Y2B4 290 aa12.49□□□□□ -0.41
SNF8-203ENST00000504000 A0A1B0GWJ7 208 aa12.48□□□□□ -0.41
SNF8-203ENST00000504000 LINC00473A8K010 186 aa12.48□□□□□ -0.41
SNF8-203ENST00000504000 HPRT1P00492 218 aa12.48□□□□□ -0.41
SNF8-203ENST00000504000 IGHV1-2P23083 117 aa12.48□□□□□ -0.41
SNF8-203ENST00000504000 GABRA2P47869 451 aa12.48□□□□□ -0.41
SNF8-203ENST00000504000 CEBPDP49716 269 aaPredicted RBP12.48□□□□□ -0.41
SNF8-203ENST00000504000 GNB1P62873 340 aa12.48□□□□□ -0.41
SNF8-203ENST00000504000 PMP22Q01453 160 aa12.48□□□□□ -0.41
SNF8-203ENST00000504000 IQCJQ1A5X6 159 aa12.48□□□□□ -0.41
SNF8-203ENST00000504000 GBGT1Q8N5D6 347 aa12.48□□□□□ -0.41
SNF8-203ENST00000504000 TMEM37Q8WXS4 190 aa12.48□□□□□ -0.41
SNF8-203ENST00000504000 MEGF10Q96KG7 1140 aa12.48□□□□□ -0.41
SNF8-203ENST00000504000 SPRR3Q9UBC9 169 aa12.48□□□□□ -0.41
SNF8-203ENST00000504000 TRAV9-1A0A075B6T8 112 aa12.48□□□□□ -0.41
SNF8-203ENST00000504000 SPINT2O43291 252 aa12.48□□□□□ -0.41
SNF8-203ENST00000504000 RBMXL2O75526 392 aaKnown RBP12.48□□□□□ -0.41
SNF8-203ENST00000504000 PDGFBP01127 241 aaPredicted RBP12.48□□□□□ -0.41
SNF8-203ENST00000504000 IGKV3-15P01624 115 aa12.48□□□□□ -0.41
SNF8-203ENST00000504000 KITLGP21583 273 aa12.48□□□□□ -0.41
SNF8-203ENST00000504000 IL3RAP26951 378 aa12.48□□□□□ -0.41
SNF8-203ENST00000504000 WDR82Q6UXN9 313 aa12.48□□□□□ -0.41
SNF8-203ENST00000504000 Q6ZT83 130 aa12.48□□□□□ -0.41
SNF8-203ENST00000504000 C1orf174Q8IYL3 243 aa12.48□□□□□ -0.41
SNF8-203ENST00000504000 MRGPRDQ8TDS7 321 aa12.48□□□□□ -0.41
SNF8-203ENST00000504000 R3HDM4Q96D70 268 aa12.48□□□□□ -0.41
SNF8-203ENST00000504000 TMEM204Q9BSN7 226 aa12.48□□□□□ -0.41
SNF8-203ENST00000504000 PXMP4Q9Y6I8 212 aa12.48□□□□□ -0.41
SNF8-203ENST00000504000 A0A1W2PPV4 95 aa12.47□□□□□ -0.41
SNF8-203ENST00000504000 C15orf65H3BRN8 121 aa12.47□□□□□ -0.41
SNF8-203ENST00000504000 DUTP33316 252 aaKnown RBP12.47□□□□□ -0.41
SNF8-203ENST00000504000 FOXF2Q12947 444 aa12.47□□□□□ -0.41
SNF8-203ENST00000504000 TRIP6Q15654 476 aaKnown RBP12.47□□□□□ -0.41
SNF8-203ENST00000504000 CR1LQ2VPA4 569 aa12.47□□□□□ -0.41
SNF8-203ENST00000504000 SMIM21Q3B7S5 101 aa12.47□□□□□ -0.41
SNF8-203ENST00000504000 UNQ6494/PRO21346Q6UXR6 183 aa12.47□□□□□ -0.41
SNF8-203ENST00000504000 DNAJC13O75165 2243 aa12.47□□□□□ -0.41
SNF8-203ENST00000504000 A0A1B0GV90 55 aa12.46□□□□□ -0.41
SNF8-203ENST00000504000 A0A1W2PNU3 283 aaPredicted RBP12.46□□□□□ -0.41
SNF8-203ENST00000504000 STAG3L2P0CL84 134 aa12.46□□□□□ -0.41
SNF8-203ENST00000504000 STAG3L3P0CL85 134 aa12.46□□□□□ -0.41
SNF8-203ENST00000504000 MPV17P39210 176 aa12.46□□□□□ -0.41
SNF8-203ENST00000504000 RAB4BP61018 213 aa12.46□□□□□ -0.41
SNF8-203ENST00000504000 YPEL3P61236 119 aaPredicted RBP12.46□□□□□ -0.41
SNF8-203ENST00000504000 HNF4GQ14541 408 aa12.46□□□□□ -0.41
SNF8-203ENST00000504000 BTNL3Q6UXE8 466 aa12.46□□□□□ -0.41
SNF8-203ENST00000504000 Q6ZR03 302 aa12.46□□□□□ -0.41
SNF8-203ENST00000504000 C1orf162Q8NEQ5 155 aaPredicted RBP12.46□□□□□ -0.41
SNF8-203ENST00000504000 DEFB127Q9H1M4 99 aa12.46□□□□□ -0.41
SNF8-203ENST00000504000 PRSS46E5RG02 174 aa12.46□□□□□ -0.42
SNF8-203ENST00000504000 WNT9BO14905 357 aa12.46□□□□□ -0.42
SNF8-203ENST00000504000 GALR2O43603 387 aaPredicted RBP12.46□□□□□ -0.42
SNF8-203ENST00000504000 CXorf1O96002 111 aa12.46□□□□□ -0.42
SNF8-203ENST00000504000 CD82P27701 267 aa12.46□□□□□ -0.42
SNF8-203ENST00000504000 SOX8P57073 446 aa12.46□□□□□ -0.42
SNF8-203ENST00000504000 TLE1Q04724 770 aa12.46□□□□□ -0.42
SNF8-203ENST00000504000 MZT1Q08AG7 82 aa12.46□□□□□ -0.42
SNF8-203ENST00000504000 GUSBP1Q15486 140 aa12.46□□□□□ -0.42
SNF8-203ENST00000504000 Q3ZCU0 254 aa12.46□□□□□ -0.42
SNF8-203ENST00000504000 OR13A1Q8NGR1 328 aa12.46□□□□□ -0.42
SNF8-203ENST00000504000 SFRP2Q96HF1 295 aa12.46□□□□□ -0.42
SNF8-203ENST00000504000 QTRT1Q9BXR0 403 aaKnown RBP12.46□□□□□ -0.42
SNF8-203ENST00000504000 CLCF1Q9UBD9 225 aa12.46□□□□□ -0.42
SNF8-203ENST00000504000 JPT1Q9UK76 154 aa12.46□□□□□ -0.42
SNF8-203ENST00000504000 R4GN57 208 aa12.46□□□□□ -0.42
SNF8-203ENST00000504000 USF3Q68DE3 2245 aa12.46□□□□□ -0.42
SNF8-203ENST00000504000 YPEL1O60688 119 aa12.45□□□□□ -0.42
SNF8-203ENST00000504000 NDUFB4O95168 129 aa12.45□□□□□ -0.42
SNF8-203ENST00000504000 OR9G9P0C7N8 305 aa12.45□□□□□ -0.42
SNF8-203ENST00000504000 VDAC2P45880 294 aaPredicted RBP12.45□□□□□ -0.42
SNF8-203ENST00000504000 FAM78BQ5VT40 261 aa12.45□□□□□ -0.42
SNF8-203ENST00000504000 TREML4Q6UXN2 200 aa12.45□□□□□ -0.42
SNF8-203ENST00000504000 FAM214BQ7L5A3 538 aa12.45□□□□□ -0.42
SNF8-203ENST00000504000 VASH2Q86V25 355 aa12.45□□□□□ -0.42
SNF8-203ENST00000504000 FAM90A1Q86YD7 464 aa12.45□□□□□ -0.42
SNF8-203ENST00000504000 TMEM178AQ8NBL3 297 aa12.45□□□□□ -0.42
SNF8-203ENST00000504000 YPEL2Q96QA6 119 aa12.45□□□□□ -0.42
SNF8-203ENST00000504000 PSG11Q9UQ72 335 aa12.45□□□□□ -0.42
SNF8-203ENST00000504000 TRAPPC1Q9Y5R8 145 aa12.45□□□□□ -0.42
SNF8-203ENST00000504000 LY96Q9Y6Y9 160 aa12.45□□□□□ -0.42
SNF8-203ENST00000504000 TRGV8A0A0C4DH27 118 aa12.44□□□□□ -0.42
SNF8-203ENST00000504000 SSTR5P35346 364 aa12.44□□□□□ -0.42
SNF8-203ENST00000504000 CHRNA7P36544 502 aa12.44□□□□□ -0.42
SNF8-203ENST00000504000 KIR2DS2P43631 304 aa12.44□□□□□ -0.42
SNF8-203ENST00000504000 ATP5G3P48201 142 aa12.44□□□□□ -0.42
SNF8-203ENST00000504000 FAM53AQ6NSI3 398 aaPredicted RBP12.44□□□□□ -0.42
SNF8-203ENST00000504000 ZNF826PQ6ZT77 177 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms