RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 ZNF383Q8NA42 475 aa17.12■□□□□ 0.33
LSM6-203ENST00000503982 LFNGQ8NES3 379 aa17.12■□□□□ 0.33
LSM6-203ENST00000503982 GRPEL2Q8TAA5 225 aa17.12■□□□□ 0.33
LSM6-203ENST00000503982 DCUN1D4Q92564 292 aa17.12■□□□□ 0.33
LSM6-203ENST00000503982 FLYWCH2Q96CP2 140 aaKnown RBP17.12■□□□□ 0.33
LSM6-203ENST00000503982 GINS4Q9BRT9 223 aa17.12■□□□□ 0.33
LSM6-203ENST00000503982 OR2D2Q9H210 308 aa17.12■□□□□ 0.33
LSM6-203ENST00000503982 CCDC59Q9P031 241 aaKnown RBP17.12■□□□□ 0.33
LSM6-203ENST00000503982 LINC01619G3V211 115 aa17.11■□□□□ 0.33
LSM6-203ENST00000503982 SLC25A17O43808 307 aa17.11■□□□□ 0.33
LSM6-203ENST00000503982 NOL3O60936 208 aaKnown RBP17.11■□□□□ 0.33
LSM6-203ENST00000503982 SAP30O75446 220 aa17.11■□□□□ 0.33
LSM6-203ENST00000503982 CNIH1O95406 144 aa17.11■□□□□ 0.33
LSM6-203ENST00000503982 DIRAS3O95661 229 aa17.11■□□□□ 0.33
LSM6-203ENST00000503982 IGHV3-11P01762 117 aa17.11■□□□□ 0.33
LSM6-203ENST00000503982 FCGR3AP08637 254 aa17.11■□□□□ 0.33
LSM6-203ENST00000503982 OR8U9P0C7N5 309 aa17.11■□□□□ 0.33
LSM6-203ENST00000503982 GSTT2P0CG29 244 aa17.11■□□□□ 0.33
LSM6-203ENST00000503982 GSTT2BP0CG30 244 aa17.11■□□□□ 0.33
LSM6-203ENST00000503982 TPPP2P59282 170 aa17.11■□□□□ 0.33
LSM6-203ENST00000503982 IGSF11Q5DX21 431 aa17.11■□□□□ 0.33
LSM6-203ENST00000503982 PYHIN1Q6K0P9 492 aa17.11■□□□□ 0.33
LSM6-203ENST00000503982 DYNC2LI1Q8TCX1 351 aa17.11■□□□□ 0.33
LSM6-203ENST00000503982 COL7A1Q02388 2944 aa17.1■□□□□ 0.33
LSM6-203ENST00000503982 SOX15O60248 233 aa17.1■□□□□ 0.33
LSM6-203ENST00000503982 SPDEFO95238 335 aa17.1■□□□□ 0.33
LSM6-203ENST00000503982 APOA1P02647 267 aa17.1■□□□□ 0.33
LSM6-203ENST00000503982 IGKV1-16P04430 117 aa17.1■□□□□ 0.33
LSM6-203ENST00000503982 DTYMKP23919 212 aa17.1■□□□□ 0.33
LSM6-203ENST00000503982 CRIP2P52943 208 aaPredicted RBP17.1■□□□□ 0.33
LSM6-203ENST00000503982 SLURP1P55000 103 aa17.1■□□□□ 0.33
LSM6-203ENST00000503982 PITPNAQ00169 270 aa17.1■□□□□ 0.33
LSM6-203ENST00000503982 HACD4Q5VWC8 232 aa17.1■□□□□ 0.33
LSM6-203ENST00000503982 ZNF562Q6V9R5 426 aa17.1■□□□□ 0.33
LSM6-203ENST00000503982 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.1■□□□□ 0.33
LSM6-203ENST00000503982 ARPC1AQ92747 370 aa17.1■□□□□ 0.33
LSM6-203ENST00000503982 ZNF230Q9UIE0 474 aaPredicted RBP17.1■□□□□ 0.33
LSM6-203ENST00000503982 ZNF256Q9Y2P7 627 aaPredicted RBP17.1■□□□□ 0.33
LSM6-203ENST00000503982 NUBP2Q9Y5Y2 271 aa17.1■□□□□ 0.33
LSM6-203ENST00000503982 DNAH9Q9NYC9 4486 aa17.1■□□□□ 0.33
LSM6-203ENST00000503982 XRCC3O43542 346 aa17.09■□□□□ 0.33
LSM6-203ENST00000503982 LGALS1P09382 135 aaKnown RBP17.09■□□□□ 0.33
LSM6-203ENST00000503982 INSL3P51460 131 aa17.09■□□□□ 0.33
LSM6-203ENST00000503982 FXYD3Q14802 87 aa17.09■□□□□ 0.33
LSM6-203ENST00000503982 ASPHD1Q5U4P2 390 aa17.09■□□□□ 0.33
LSM6-203ENST00000503982 DIABLOQ9NR28 239 aa17.09■□□□□ 0.33
LSM6-203ENST00000503982 IGHV4OR15-8A0A075B7B6 117 aa17.08■□□□□ 0.32
LSM6-203ENST00000503982 A0A087WW49 117 aa17.08■□□□□ 0.32
LSM6-203ENST00000503982 SMIM31A0A1B0GVY4 71 aa17.08■□□□□ 0.32
LSM6-203ENST00000503982 PROP1O75360 226 aa17.08■□□□□ 0.32
LSM6-203ENST00000503982 TPPPO94811 219 aa17.08■□□□□ 0.32
LSM6-203ENST00000503982 TRGV3P03979 118 aa17.08■□□□□ 0.32
LSM6-203ENST00000503982 EGR2P11161 476 aaPredicted RBP17.08■□□□□ 0.32
LSM6-203ENST00000503982 CDNFQ49AH0 187 aa17.08■□□□□ 0.32
LSM6-203ENST00000503982 AKIRIN2Q53H80 203 aa17.08■□□□□ 0.32
LSM6-203ENST00000503982 MZT2AQ6P582 158 aa17.08■□□□□ 0.32
LSM6-203ENST00000503982 SAMD12Q8N8I0 201 aa17.08■□□□□ 0.32
LSM6-203ENST00000503982 S100A16Q96FQ6 103 aaKnown RBP17.08■□□□□ 0.32
LSM6-203ENST00000503982 HARBI1Q96MB7 349 aa17.08■□□□□ 0.32
LSM6-203ENST00000503982 TOLLIPQ9H0E2 274 aa17.08■□□□□ 0.32
LSM6-203ENST00000503982 TPSG1Q9NRR2 321 aa17.08■□□□□ 0.32
LSM6-203ENST00000503982 C19orf54Q5BKX5 351 aa17.07■□□□□ 0.32
LSM6-203ENST00000503982 ZNF429Q86V71 674 aa17.07■□□□□ 0.32
LSM6-203ENST00000503982 DLX4Q92988 240 aaPredicted RBP17.07■□□□□ 0.32
LSM6-203ENST00000503982 ASCL2Q99929 193 aa17.07■□□□□ 0.32
LSM6-203ENST00000503982 CABLES2Q9BTV7 478 aa17.07■□□□□ 0.32
LSM6-203ENST00000503982 SDHAF2Q9NX18 166 aa17.07■□□□□ 0.32
LSM6-203ENST00000503982 NDUFA13Q9P0J0 144 aa17.07■□□□□ 0.32
LSM6-203ENST00000503982 TRBV6-7A0A0A0MS04 114 aa17.06■□□□□ 0.32
LSM6-203ENST00000503982 J3QRK9 145 aa17.06■□□□□ 0.32
LSM6-203ENST00000503982 SHOXO15266 292 aa17.06■□□□□ 0.32
LSM6-203ENST00000503982 RTL8BQ17RB0 113 aa17.06■□□□□ 0.32
LSM6-203ENST00000503982 BVESQ8NE79 360 aa17.06■□□□□ 0.32
LSM6-203ENST00000503982 OR5T1Q8NG75 326 aa17.06■□□□□ 0.32
LSM6-203ENST00000503982 PHB2Q99623 299 aa17.06■□□□□ 0.32
LSM6-203ENST00000503982 SLA2Q9H6Q3 261 aa17.06■□□□□ 0.32
LSM6-203ENST00000503982 RSL24D1Q9UHA3 163 aaKnown RBP17.06■□□□□ 0.32
LSM6-203ENST00000503982 C13orf42A0A1B0GVH6 325 aa17.05■□□□□ 0.32
LSM6-203ENST00000503982 HSPB1P04792 205 aaKnown RBP17.05■□□□□ 0.32
LSM6-203ENST00000503982 NHLRC4P0CG21 123 aaPredicted RBP17.05■□□□□ 0.32
LSM6-203ENST00000503982 LGALS7P47929 136 aa17.05■□□□□ 0.32
LSM6-203ENST00000503982 WWC2-AS2Q96NR7 200 aa17.05■□□□□ 0.32
LSM6-203ENST00000503982 SLIRPQ9GZT3 109 aaKnown RBP17.05■□□□□ 0.32
LSM6-203ENST00000503982 AUNIPQ9H7T9 357 aa17.05■□□□□ 0.32
LSM6-203ENST00000503982 COMMD3Q9UBI1 195 aa17.05■□□□□ 0.32
LSM6-203ENST00000503982 LSM4Q9Y4Z0 139 aaKnown RBP17.05■□□□□ 0.32
LSM6-203ENST00000503982 SORL1Q92673 2214 aa17.05■□□□□ 0.32
LSM6-203ENST00000503982 TMEM235A6NFC5 223 aa17.04■□□□□ 0.32
LSM6-203ENST00000503982 NXF2Q9GZY0 626 aaKnown RBP17.04■□□□□ 0.32
LSM6-203ENST00000503982 TRAV18A0A075B6X5 111 aa17.03■□□□□ 0.32
LSM6-203ENST00000503982 ARPC1BO15143 372 aaKnown RBP17.03■□□□□ 0.32
LSM6-203ENST00000503982 EIF4EP06730 217 aaKnown RBP17.03■□□□□ 0.32
LSM6-203ENST00000503982 RRASP10301 218 aa17.03■□□□□ 0.32
LSM6-203ENST00000503982 TAGLNQ01995 201 aaKnown RBP17.03■□□□□ 0.32
LSM6-203ENST00000503982 VMA21Q3ZAQ7 101 aa17.03■□□□□ 0.32
LSM6-203ENST00000503982 POC5Q8NA72 575 aa17.03■□□□□ 0.32
LSM6-203ENST00000503982 OR6Q1Q8NGQ2 317 aa17.03■□□□□ 0.32
LSM6-203ENST00000503982 OR4C12Q96R67 309 aa17.03■□□□□ 0.32
LSM6-203ENST00000503982 RSRP1Q9BUV0 290 aa17.03■□□□□ 0.32
LSM6-203ENST00000503982 ST6GALNAC5Q9BVH7 336 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms