RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 SCGNO76038 276 aa9.24□□□□□ -0.93
MED28-203ENST00000503945 IGHV3-11P01762 117 aa9.24□□□□□ -0.93
MED28-203ENST00000503945 DTYMKP23919 212 aa9.24□□□□□ -0.93
MED28-203ENST00000503945 ASPHD1Q5U4P2 390 aa9.24□□□□□ -0.93
MED28-203ENST00000503945 HACD4Q5VWC8 232 aa9.24□□□□□ -0.93
MED28-203ENST00000503945 OR4C12Q96R67 309 aa9.24□□□□□ -0.93
MED28-203ENST00000503945 DCUN1D5Q9BTE7 237 aa9.24□□□□□ -0.93
MED28-203ENST00000503945 ELOVL1Q9BW60 279 aa9.24□□□□□ -0.93
MED28-203ENST00000503945 RANGRFQ9HD47 186 aaPredicted RBP9.24□□□□□ -0.93
MED28-203ENST00000503945 TPSG1Q9NRR2 321 aa9.24□□□□□ -0.93
MED28-203ENST00000503945 DAPK2Q9UIK4 370 aa9.24□□□□□ -0.93
MED28-203ENST00000503945 IGHV4OR15-8A0A075B7B6 117 aa9.23□□□□□ -0.93
MED28-203ENST00000503945 A0A087WW49 117 aa9.23□□□□□ -0.93
MED28-203ENST00000503945 SMIM30A4D0T7 59 aa9.23□□□□□ -0.93
MED28-203ENST00000503945 MSGN1A6NI15 193 aa9.23□□□□□ -0.93
MED28-203ENST00000503945 SRRM4A7MD48 611 aaKnown RBP9.23□□□□□ -0.93
MED28-203ENST00000503945 H3BUA1 57 aa9.23□□□□□ -0.93
MED28-203ENST00000503945 J3QRK9 145 aa9.23□□□□□ -0.93
MED28-203ENST00000503945 SLC22A5O76082 557 aa9.23□□□□□ -0.93
MED28-203ENST00000503945 IGLV2-23P01705 113 aa9.23□□□□□ -0.93
MED28-203ENST00000503945 CRYGBP07316 175 aa9.23□□□□□ -0.93
MED28-203ENST00000503945 SNRPBP14678 240 aaKnown RBP9.23□□□□□ -0.93
MED28-203ENST00000503945 SLURP1P55000 103 aa9.23□□□□□ -0.93
MED28-203ENST00000503945 PJVKQ0ZLH3 352 aa9.23□□□□□ -0.93
MED28-203ENST00000503945 VMA21Q3ZAQ7 101 aa9.23□□□□□ -0.93
MED28-203ENST00000503945 TMEM177Q53S58 311 aa9.23□□□□□ -0.93
MED28-203ENST00000503945 NR2C2APQ86WQ0 139 aa9.23□□□□□ -0.93
MED28-203ENST00000503945 H1FOOQ8IZA3 346 aaPredicted RBP9.23□□□□□ -0.93
MED28-203ENST00000503945 TEX45Q8NA69 505 aa9.23□□□□□ -0.93
MED28-203ENST00000503945 HARBI1Q96MB7 349 aa9.23□□□□□ -0.93
MED28-203ENST00000503945 RRP15Q9Y3B9 282 aaKnown RBP9.23□□□□□ -0.93
MED28-203ENST00000503945 SMAD5-AS1Q9Y6J3 95 aa9.23□□□□□ -0.93
MED28-203ENST00000503945 U3KQK5 164 aa9.23□□□□□ -0.93
MED28-203ENST00000503945 IGKV1D-8A0A087WSZ0 117 aa9.22□□□□□ -0.93
MED28-203ENST00000503945 ZP3P21754 424 aa9.22□□□□□ -0.93
MED28-203ENST00000503945 DUTP33316 252 aaKnown RBP9.22□□□□□ -0.93
MED28-203ENST00000503945 GNG2P59768 71 aa9.22□□□□□ -0.93
MED28-203ENST00000503945 TATDN3Q17R31 274 aa9.22□□□□□ -0.93
MED28-203ENST00000503945 ACSM6Q6P461 480 aa9.22□□□□□ -0.93
MED28-203ENST00000503945 CNIH2Q6PI25 160 aa9.22□□□□□ -0.93
MED28-203ENST00000503945 POC5Q8NA72 575 aa9.22□□□□□ -0.93
MED28-203ENST00000503945 OR6Q1Q8NGQ2 317 aa9.22□□□□□ -0.93
MED28-203ENST00000503945 PHB2Q99623 299 aa9.22□□□□□ -0.93
MED28-203ENST00000503945 ELF5Q9UKW6 265 aaPredicted RBP9.22□□□□□ -0.93
MED28-203ENST00000503945 PRELID3BQ9Y3B1 194 aa9.22□□□□□ -0.93
MED28-203ENST00000503945 OR2W1Q9Y3N9 320 aa9.22□□□□□ -0.93
MED28-203ENST00000503945 ACTL6BO94805 426 aa9.21□□□□□ -0.94
MED28-203ENST00000503945 BRI3O95415 125 aa9.21□□□□□ -0.94
MED28-203ENST00000503945 CRYZL1O95825 349 aa9.21□□□□□ -0.94
MED28-203ENST00000503945 HLA-DQB1P01920 261 aa9.21□□□□□ -0.94
MED28-203ENST00000503945 AADACP22760 399 aa9.21□□□□□ -0.94
MED28-203ENST00000503945 NFYAP23511 347 aaPredicted RBP9.21□□□□□ -0.94
MED28-203ENST00000503945 SDC2P34741 201 aa9.21□□□□□ -0.94
MED28-203ENST00000503945 UBE2KP61086 200 aa9.21□□□□□ -0.94
MED28-203ENST00000503945 SFXN4Q6P4A7 337 aa9.21□□□□□ -0.94
MED28-203ENST00000503945 OSR1Q8TAX0 266 aaPredicted RBP9.21□□□□□ -0.94
MED28-203ENST00000503945 USMG5Q96IX5 58 aa9.21□□□□□ -0.94
MED28-203ENST00000503945 OR51E2Q9H255 320 aa9.21□□□□□ -0.94
MED28-203ENST00000503945 DYNC2H1Q8NCM8 4307 aaKnown RBP9.21□□□□□ -0.94
MED28-203ENST00000503945 HUWE1Q7Z6Z7 4374 aaKnown RBP9.2□□□□□ -0.94
MED28-203ENST00000503945 LOC100506127A0A0U1RQW1 187 aa9.2□□□□□ -0.94
MED28-203ENST00000503945 ANKRD34BA5PLL1 514 aa9.2□□□□□ -0.94
MED28-203ENST00000503945 TMEM235A6NFC5 223 aa9.2□□□□□ -0.94
MED28-203ENST00000503945 MPPED1O15442 326 aa9.2□□□□□ -0.94
MED28-203ENST00000503945 CREBL2O60519 120 aaPredicted RBP9.2□□□□□ -0.94
MED28-203ENST00000503945 FCGR3BO75015 233 aa9.2□□□□□ -0.94
MED28-203ENST00000503945 TUSC2O75896 110 aa9.2□□□□□ -0.94
MED28-203ENST00000503945 SPNP16150 400 aa9.2□□□□□ -0.94
MED28-203ENST00000503945 CD36P16671 472 aa9.2□□□□□ -0.94
MED28-203ENST00000503945 MXD1Q05195 221 aa9.2□□□□□ -0.94
MED28-203ENST00000503945 TNXAQ16473 311 aa9.2□□□□□ -0.94
MED28-203ENST00000503945 PRSS8Q16651 343 aa9.2□□□□□ -0.94
MED28-203ENST00000503945 IDNKQ5T6J7 187 aa9.2□□□□□ -0.94
MED28-203ENST00000503945 ZNF773Q6PK81 442 aa9.2□□□□□ -0.94
MED28-203ENST00000503945 ANKRD13BQ86YJ7 626 aa9.2□□□□□ -0.94
MED28-203ENST00000503945 ZNF645Q8N7E2 425 aa9.2□□□□□ -0.94
MED28-203ENST00000503945 DDB2Q92466 427 aa9.2□□□□□ -0.94
MED28-203ENST00000503945 ASCL2Q99929 193 aa9.2□□□□□ -0.94
MED28-203ENST00000503945 DIABLOQ9NR28 239 aa9.2□□□□□ -0.94
MED28-203ENST00000503945 COA4Q9NYJ1 87 aa9.2□□□□□ -0.94
MED28-203ENST00000503945 PEF1Q9UBV8 284 aaKnown RBP9.2□□□□□ -0.94
MED28-203ENST00000503945 ANXA10Q9UJ72 324 aa9.2□□□□□ -0.94
MED28-203ENST00000503945 TRAV18A0A075B6X5 111 aa9.19□□□□□ -0.94
MED28-203ENST00000503945 LINC00473A8K010 186 aa9.19□□□□□ -0.94
MED28-203ENST00000503945 GP9P14770 177 aa9.19□□□□□ -0.94
MED28-203ENST00000503945 SCAND1P57086 179 aa9.19□□□□□ -0.94
MED28-203ENST00000503945 SSBP2P81877 361 aaPredicted RBP9.19□□□□□ -0.94
MED28-203ENST00000503945 NUDCD2Q8WVJ2 157 aa9.19□□□□□ -0.94
MED28-203ENST00000503945 ACOT12Q8WYK0 555 aa9.19□□□□□ -0.94
MED28-203ENST00000503945 C5orf30Q96GV9 206 aa9.19□□□□□ -0.94
MED28-203ENST00000503945 TINAGL1Q9GZM7 467 aaPredicted RBP9.19□□□□□ -0.94
MED28-203ENST00000503945 RHBDL2Q9NX52 303 aa9.19□□□□□ -0.94
MED28-203ENST00000503945 MRPS7Q9Y2R9 242 aaKnown RBP9.19□□□□□ -0.94
MED28-203ENST00000503945 RBMX2Q9Y388 322 aaKnown RBP9.19□□□□□ -0.94
MED28-203ENST00000503945 ETV7Q9Y603 341 aa9.19□□□□□ -0.94
MED28-203ENST00000503945 C3orf84H3BNL1 204 aa9.18□□□□□ -0.94
MED28-203ENST00000503945 TMEM127O75204 238 aa9.18□□□□□ -0.94
MED28-203ENST00000503945 APELAP0DMC3 54 aa9.18□□□□□ -0.94
MED28-203ENST00000503945 KLF5Q13887 457 aaPredicted RBP9.18□□□□□ -0.94
MED28-203ENST00000503945 IDO2Q6ZQW0 420 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms