RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 SRRM4A7MD48 611 aaKnown RBP12.54□□□□□ -0.4
SCLT1-204ENST00000503215 OVOL1O14753 267 aa12.54□□□□□ -0.4
SCLT1-204ENST00000503215 MRPS14O60783 128 aaKnown RBP12.54□□□□□ -0.4
SCLT1-204ENST00000503215 CRYGBP07316 175 aa12.54□□□□□ -0.4
SCLT1-204ENST00000503215 LGALS1P09382 135 aaKnown RBP12.54□□□□□ -0.4
SCLT1-204ENST00000503215 RAB3BP20337 219 aa12.54□□□□□ -0.4
SCLT1-204ENST00000503215 MYL9P24844 172 aa12.54□□□□□ -0.4
SCLT1-204ENST00000503215 SERPINB10P48595 397 aa12.54□□□□□ -0.4
SCLT1-204ENST00000503215 FXYD3Q14802 87 aa12.54□□□□□ -0.4
SCLT1-204ENST00000503215 AKIRIN2Q53H80 203 aa12.54□□□□□ -0.4
SCLT1-204ENST00000503215 PDPNQ86YL7 162 aa12.54□□□□□ -0.4
SCLT1-204ENST00000503215 OR5T1Q8NG75 326 aa12.54□□□□□ -0.4
SCLT1-204ENST00000503215 FLYWCH2Q96CP2 140 aaKnown RBP12.54□□□□□ -0.4
SCLT1-204ENST00000503215 DCUN1D5Q9BTE7 237 aa12.54□□□□□ -0.4
SCLT1-204ENST00000503215 ZNF256Q9Y2P7 627 aaPredicted RBP12.54□□□□□ -0.4
SCLT1-204ENST00000503215 LINC01619G3V211 115 aa12.53□□□□□ -0.4
SCLT1-204ENST00000503215 APOA2P02652 100 aa12.53□□□□□ -0.4
SCLT1-204ENST00000503215 RAB6AP20340 208 aa12.53□□□□□ -0.4
SCLT1-204ENST00000503215 TPPP2P59282 170 aa12.53□□□□□ -0.4
SCLT1-204ENST00000503215 TMEM267Q0VDI3 215 aaPredicted RBP12.53□□□□□ -0.4
SCLT1-204ENST00000503215 MRGPRG-AS1Q2M3A8 158 aa12.53□□□□□ -0.4
SCLT1-204ENST00000503215 SPARTQ8N0X7 666 aa12.53□□□□□ -0.4
SCLT1-204ENST00000503215 TCTEX1D1Q8N7M0 179 aa12.53□□□□□ -0.4
SCLT1-204ENST00000503215 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.53□□□□□ -0.4
SCLT1-204ENST00000503215 OR10J5Q8NHC4 309 aa12.53□□□□□ -0.4
SCLT1-204ENST00000503215 CHAC2Q8WUX2 184 aa12.53□□□□□ -0.4
SCLT1-204ENST00000503215 ARPC1AQ92747 370 aa12.53□□□□□ -0.4
SCLT1-204ENST00000503215 RHOVQ96L33 236 aa12.53□□□□□ -0.4
SCLT1-204ENST00000503215 SPDEFO95238 335 aa12.52□□□□□ -0.41
SCLT1-204ENST00000503215 LY86O95711 162 aa12.52□□□□□ -0.41
SCLT1-204ENST00000503215 EIF2B2P49770 351 aaKnown RBP12.52□□□□□ -0.41
SCLT1-204ENST00000503215 MRPS15P82914 257 aaKnown RBP12.52□□□□□ -0.41
SCLT1-204ENST00000503215 DEFA5Q01523 94 aa12.52□□□□□ -0.41
SCLT1-204ENST00000503215 UBE2UQ5VVX9 321 aa12.52□□□□□ -0.41
SCLT1-204ENST00000503215 ANKRD13BQ86YJ7 626 aa12.52□□□□□ -0.41
SCLT1-204ENST00000503215 BVESQ8NE79 360 aa12.52□□□□□ -0.41
SCLT1-204ENST00000503215 ATG5Q9H1Y0 275 aa12.52□□□□□ -0.41
SCLT1-204ENST00000503215 KMT2CQ8NEZ4 4911 aaKnown RBP12.51□□□□□ -0.41
SCLT1-204ENST00000503215 J3QRK9 145 aa12.51□□□□□ -0.41
SCLT1-204ENST00000503215 SAP30O75446 220 aa12.51□□□□□ -0.41
SCLT1-204ENST00000503215 TRGV3P03979 118 aa12.51□□□□□ -0.41
SCLT1-204ENST00000503215 SPNP16150 400 aa12.51□□□□□ -0.41
SCLT1-204ENST00000503215 GADD45AP24522 165 aa12.51□□□□□ -0.41
SCLT1-204ENST00000503215 PSMB9P28065 219 aa12.51□□□□□ -0.41
SCLT1-204ENST00000503215 ARFRP1Q13795 201 aa12.51□□□□□ -0.41
SCLT1-204ENST00000503215 HAPLN4Q86UW8 402 aa12.51□□□□□ -0.41
SCLT1-204ENST00000503215 H1FOOQ8IZA3 346 aaPredicted RBP12.51□□□□□ -0.41
SCLT1-204ENST00000503215 TXNL4BQ9NX01 149 aaKnown RBP12.51□□□□□ -0.41
SCLT1-204ENST00000503215 BOLA1Q9Y3E2 137 aa12.51□□□□□ -0.41
SCLT1-204ENST00000503215 TNCP24821 2201 aa12.51□□□□□ -0.41
SCLT1-204ENST00000503215 CNIH1O95406 144 aa12.5□□□□□ -0.41
SCLT1-204ENST00000503215 HSPB1P04792 205 aaKnown RBP12.5□□□□□ -0.41
SCLT1-204ENST00000503215 APELAP0DMC3 54 aa12.5□□□□□ -0.41
SCLT1-204ENST00000503215 INSL3P51460 131 aa12.5□□□□□ -0.41
SCLT1-204ENST00000503215 CDNFQ49AH0 187 aa12.5□□□□□ -0.41
SCLT1-204ENST00000503215 THOC7Q6I9Y2 204 aaKnown RBP12.5□□□□□ -0.41
SCLT1-204ENST00000503215 ZNF429Q86V71 674 aa12.5□□□□□ -0.41
SCLT1-204ENST00000503215 WWC2-AS2Q96NR7 200 aa12.5□□□□□ -0.41
SCLT1-204ENST00000503215 AKIP1Q9NQ31 210 aa12.5□□□□□ -0.41
SCLT1-204ENST00000503215 ZNF355PQ9NSJ1 428 aa12.5□□□□□ -0.41
SCLT1-204ENST00000503215 DAPK2Q9UIK4 370 aa12.5□□□□□ -0.41
SCLT1-204ENST00000503215 U3KQK5 164 aa12.5□□□□□ -0.41
SCLT1-204ENST00000503215 METTL21EPA6NDL7 271 aa12.49□□□□□ -0.41
SCLT1-204ENST00000503215 LINC00473A8K010 186 aa12.49□□□□□ -0.41
SCLT1-204ENST00000503215 RBMXL2O75526 392 aaKnown RBP12.49□□□□□ -0.41
SCLT1-204ENST00000503215 GALP22466 123 aa12.49□□□□□ -0.41
SCLT1-204ENST00000503215 TALDO1P37837 337 aa12.49□□□□□ -0.41
SCLT1-204ENST00000503215 TMEM177Q53S58 311 aa12.49□□□□□ -0.41
SCLT1-204ENST00000503215 PYHIN1Q6K0P9 492 aa12.49□□□□□ -0.41
SCLT1-204ENST00000503215 ACSM6Q6P461 480 aa12.49□□□□□ -0.41
SCLT1-204ENST00000503215 DDB2Q92466 427 aa12.49□□□□□ -0.41
SCLT1-204ENST00000503215 HARBI1Q96MB7 349 aa12.49□□□□□ -0.41
SCLT1-204ENST00000503215 GINS4Q9BRT9 223 aa12.49□□□□□ -0.41
SCLT1-204ENST00000503215 ST6GALNAC5Q9BVH7 336 aa12.49□□□□□ -0.41
SCLT1-204ENST00000503215 RNF167Q9H6Y7 350 aa12.49□□□□□ -0.41
SCLT1-204ENST00000503215 RBM7Q9Y580 266 aaKnown RBP12.49□□□□□ -0.41
SCLT1-204ENST00000503215 NOTOA8MTQ0 251 aa12.48□□□□□ -0.41
SCLT1-204ENST00000503215 SHOXO15266 292 aa12.48□□□□□ -0.41
SCLT1-204ENST00000503215 CLEC2LP0C7M8 214 aa12.48□□□□□ -0.41
SCLT1-204ENST00000503215 NHLRC4P0CG21 123 aaPredicted RBP12.48□□□□□ -0.41
SCLT1-204ENST00000503215 ZNF182P17025 639 aaPredicted RBP12.48□□□□□ -0.41
SCLT1-204ENST00000503215 CD40LGP29965 261 aa12.48□□□□□ -0.41
SCLT1-204ENST00000503215 FGF9P31371 208 aaPredicted RBP12.48□□□□□ -0.41
SCLT1-204ENST00000503215 DUTP33316 252 aaKnown RBP12.48□□□□□ -0.41
SCLT1-204ENST00000503215 LGALS7P47929 136 aa12.48□□□□□ -0.41
SCLT1-204ENST00000503215 IDO2Q6ZQW0 420 aa12.48□□□□□ -0.41
SCLT1-204ENST00000503215 Q6ZS49 121 aa12.48□□□□□ -0.41
SCLT1-204ENST00000503215 POC5Q8NA72 575 aa12.48□□□□□ -0.41
SCLT1-204ENST00000503215 NUDCD2Q8WVJ2 157 aa12.48□□□□□ -0.41
SCLT1-204ENST00000503215 OR51E2Q9H255 320 aa12.48□□□□□ -0.41
SCLT1-204ENST00000503215 ANKRD34BA5PLL1 514 aa12.47□□□□□ -0.41
SCLT1-204ENST00000503215 TMEM235A6NFC5 223 aa12.47□□□□□ -0.41
SCLT1-204ENST00000503215 RGS13O14921 159 aa12.47□□□□□ -0.41
SCLT1-204ENST00000503215 DIRAS3O95661 229 aa12.47□□□□□ -0.41
SCLT1-204ENST00000503215 CRYZL1O95825 349 aa12.47□□□□□ -0.41
SCLT1-204ENST00000503215 NFYAP23511 347 aaPredicted RBP12.47□□□□□ -0.41
SCLT1-204ENST00000503215 SRSF7Q16629 238 aaKnown RBP eCLIP12.47□□□□□ -0.41
SCLT1-204ENST00000503215 OVCH2Q7RTZ1 564 aa12.47□□□□□ -0.41
SCLT1-204ENST00000503215 SLA2Q9H6Q3 261 aa12.47□□□□□ -0.41
SCLT1-204ENST00000503215 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.47□□□□□ -0.412e-6■■■■□ 19.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms