RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 ABHD14BQ96IU4 210 aa9.67□□□□□ -0.86
USP46-204ENST00000503060 VPS25Q9BRG1 176 aa9.67□□□□□ -0.86
USP46-204ENST00000503060 Q9UFV3 132 aa9.67□□□□□ -0.86
USP46-204ENST00000503060 RBM7Q9Y580 266 aaKnown RBP9.67□□□□□ -0.86
USP46-204ENST00000503060 APC2O95996 2303 aa9.67□□□□□ -0.86
USP46-204ENST00000503060 SIGLEC5O15389 551 aa9.67□□□□□ -0.86
USP46-204ENST00000503060 OR8U9P0C7N5 309 aa9.67□□□□□ -0.86
USP46-204ENST00000503060 EGR1P18146 543 aa9.67□□□□□ -0.86
USP46-204ENST00000503060 GFRALQ6UXV0 394 aa9.67□□□□□ -0.86
USP46-204ENST00000503060 CD177Q8N6Q3 437 aa9.67□□□□□ -0.86
USP46-204ENST00000503060 OR8U1Q8NH10 309 aa9.67□□□□□ -0.86
USP46-204ENST00000503060 KCNS2Q9ULS6 477 aa9.67□□□□□ -0.86
USP46-204ENST00000503060 IGLV3-9A0A075B6K5 115 aa9.66□□□□□ -0.86
USP46-204ENST00000503060 PIGBOS1A0A0B4J2F0 54 aa9.66□□□□□ -0.86
USP46-204ENST00000503060 SRRM5B3KS81 715 aa9.66□□□□□ -0.86
USP46-204ENST00000503060 SERPINE2P07093 398 aa9.66□□□□□ -0.86
USP46-204ENST00000503060 METTL15P1P0C7V9 234 aa9.66□□□□□ -0.86
USP46-204ENST00000503060 PSG2P11465 335 aa9.66□□□□□ -0.86
USP46-204ENST00000503060 PAX1P15863 534 aa9.66□□□□□ -0.86
USP46-204ENST00000503060 RPS23P62266 143 aaKnown RBP9.66□□□□□ -0.86
USP46-204ENST00000503060 RBPJQ06330 500 aa9.66□□□□□ -0.86
USP46-204ENST00000503060 C22orf34Q6ZV56 151 aa9.66□□□□□ -0.86
USP46-204ENST00000503060 MRGPRGQ86SM5 289 aa9.66□□□□□ -0.86
USP46-204ENST00000503060 GALMQ96C23 342 aa9.66□□□□□ -0.86
USP46-204ENST00000503060 SPENQ96T58 3664 aaKnown RBP9.66□□□□□ -0.86
USP46-204ENST00000503060 CFAP47Q6ZTR5 3102 aa9.66□□□□□ -0.86
USP46-204ENST00000503060 HBZP02008 142 aa9.66□□□□□ -0.86
USP46-204ENST00000503060 IL2RGP31785 369 aa9.66□□□□□ -0.86
USP46-204ENST00000503060 PRDX2P32119 198 aa9.66□□□□□ -0.86
USP46-204ENST00000503060 CCKARP32238 428 aa9.66□□□□□ -0.86
USP46-204ENST00000503060 GABRA2P47869 451 aa9.66□□□□□ -0.86
USP46-204ENST00000503060 TLE4Q04727 773 aa9.66□□□□□ -0.86
USP46-204ENST00000503060 C4orf17Q53FE4 359 aa9.66□□□□□ -0.86
USP46-204ENST00000503060 CXorf66Q5JRM2 361 aaPredicted RBP9.66□□□□□ -0.86
USP46-204ENST00000503060 C1orf87Q8N0U7 546 aa9.66□□□□□ -0.86
USP46-204ENST00000503060 UBAC2Q8NBM4 344 aa9.66□□□□□ -0.86
USP46-204ENST00000503060 NECAP1Q8NC96 275 aa9.66□□□□□ -0.86
USP46-204ENST00000503060 ARV1Q9H2C2 271 aa9.66□□□□□ -0.86
USP46-204ENST00000503060 WFDC1Q9HC57 220 aa9.66□□□□□ -0.86
USP46-204ENST00000503060 A0A0G2JRQ6 117 aa9.65□□□□□ -0.86
USP46-204ENST00000503060 ZNF705EA8MWA4 302 aaPredicted RBP9.65□□□□□ -0.86
USP46-204ENST00000503060 ZNF561-AS1K7EIQ3 104 aa9.65□□□□□ -0.86
USP46-204ENST00000503060 PVALBP20472 110 aaPredicted RBP9.65□□□□□ -0.86
USP46-204ENST00000503060 CD40P25942 277 aa9.65□□□□□ -0.86
USP46-204ENST00000503060 CFHR2P36980 270 aa9.65□□□□□ -0.86
USP46-204ENST00000503060 GLIPR1P48060 266 aa9.65□□□□□ -0.86
USP46-204ENST00000503060 ID3Q02535 119 aa9.65□□□□□ -0.86
USP46-204ENST00000503060 SPRNQ5BIV9 151 aa9.65□□□□□ -0.86
USP46-204ENST00000503060 FAM90A1Q86YD7 464 aa9.65□□□□□ -0.86
USP46-204ENST00000503060 DRAM1Q8N682 238 aa9.65□□□□□ -0.86
USP46-204ENST00000503060 TMEM116Q8NCL8 245 aa9.65□□□□□ -0.86
USP46-204ENST00000503060 NRGNQ92686 78 aa9.65□□□□□ -0.86
USP46-204ENST00000503060 SLC25A10Q9UBX3 287 aaPredicted RBP9.65□□□□□ -0.86
USP46-204ENST00000503060 ZNF835Q9Y2P0 537 aa9.65□□□□□ -0.86
USP46-204ENST00000503060 SPTBN2O15020 2390 aa9.65□□□□□ -0.86
USP46-204ENST00000503060 ANKRD11Q6UB99 2663 aaPredicted RBP9.65□□□□□ -0.86
USP46-204ENST00000503060 SPRY3O43610 288 aa9.65□□□□□ -0.86
USP46-204ENST00000503060 SSSCA1O60232 199 aa9.65□□□□□ -0.86
USP46-204ENST00000503060 SULT1A2P50226 295 aa9.65□□□□□ -0.86
USP46-204ENST00000503060 EWSR1Q01844 656 aaKnown RBP eCLIP9.65□□□□□ -0.86
USP46-204ENST00000503060 MST1LQ2TV78 715 aa9.65□□□□□ -0.86
USP46-204ENST00000503060 ATRAIDQ6UW56 229 aa9.65□□□□□ -0.86
USP46-204ENST00000503060 RBMS3Q6XE24 437 aaKnown RBP9.65□□□□□ -0.86
USP46-204ENST00000503060 GCSAMQ8N6F7 178 aa9.65□□□□□ -0.86
USP46-204ENST00000503060 BOLLQ8N9W6 283 aaKnown RBP9.65□□□□□ -0.86
USP46-204ENST00000503060 OR52L2PQ8NGH6 319 aa9.65□□□□□ -0.86
USP46-204ENST00000503060 OCC1Q8TAD7 63 aa9.65□□□□□ -0.86
USP46-204ENST00000503060 ARL11Q969Q4 196 aa9.65□□□□□ -0.86
USP46-204ENST00000503060 ST6GALNAC6Q969X2 333 aa9.65□□□□□ -0.86
USP46-204ENST00000503060 GPR146Q96CH1 333 aa9.65□□□□□ -0.86
USP46-204ENST00000503060 PLEKHF2Q9H8W4 249 aa9.65□□□□□ -0.86
USP46-204ENST00000503060 LIN7CQ9NUP9 197 aaKnown RBP9.65□□□□□ -0.86
USP46-204ENST00000503060 ELOVL5Q9NYP7 299 aa9.65□□□□□ -0.86
USP46-204ENST00000503060 IGKV1D-17A0A075B6S4 117 aa9.64□□□□□ -0.87
USP46-204ENST00000503060 BORCS7-ASMTA0A0B4J1R7 106 aa9.64□□□□□ -0.87
USP46-204ENST00000503060 FAM24AA6NFZ4 105 aa9.64□□□□□ -0.87
USP46-204ENST00000503060 RNASEK-C17orf49H0YIS7 233 aa9.64□□□□□ -0.87
USP46-204ENST00000503060 ZNF737O75373 536 aa9.64□□□□□ -0.87
USP46-204ENST00000503060 IGKV1-39P01597 117 aa9.64□□□□□ -0.87
USP46-204ENST00000503060 IGKV1D-39P04432 117 aa9.64□□□□□ -0.87
USP46-204ENST00000503060 SLC25A6P12236 298 aa9.64□□□□□ -0.87
USP46-204ENST00000503060 SEC61GP60059 68 aa9.64□□□□□ -0.87
USP46-204ENST00000503060 PKIAP61925 76 aa9.64□□□□□ -0.87
USP46-204ENST00000503060 PAX5Q02548 391 aa9.64□□□□□ -0.87
USP46-204ENST00000503060 PRR30Q53SZ7 412 aaPredicted RBP9.64□□□□□ -0.87
USP46-204ENST00000503060 STPG2Q8N412 459 aa9.64□□□□□ -0.87
USP46-204ENST00000503060 TPRX1Q8N7U7 411 aa9.64□□□□□ -0.87
USP46-204ENST00000503060 OR13A1Q8NGR1 328 aa9.64□□□□□ -0.87
USP46-204ENST00000503060 ITLN1Q8WWA0 313 aa9.64□□□□□ -0.87
USP46-204ENST00000503060 SNRNP40Q96DI7 357 aaKnown RBP9.64□□□□□ -0.87
USP46-204ENST00000503060 SMIM8Q96KF7 97 aa9.64□□□□□ -0.87
USP46-204ENST00000503060 TSNAXQ99598 290 aaKnown RBP9.64□□□□□ -0.87
USP46-204ENST00000503060 PLA2G2EQ9NZK7 142 aa9.64□□□□□ -0.87
USP46-204ENST00000503060 CHD3Q12873 2000 aaKnown RBP9.64□□□□□ -0.87
USP46-204ENST00000503060 A0A1B0GU03 582 aa9.64□□□□□ -0.87
USP46-204ENST00000503060 TSTD3H0UI37 97 aa9.64□□□□□ -0.87
USP46-204ENST00000503060 C16orf97H3BN30 126 aa9.64□□□□□ -0.87
USP46-204ENST00000503060 PITX3O75364 302 aa9.64□□□□□ -0.87
USP46-204ENST00000503060 MMP9P14780 707 aa9.64□□□□□ -0.87
USP46-204ENST00000503060 EPHA1P21709 976 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms