RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 C10orf91Q5T1B1 145 aa6.26□□□□□ -1.41
PDGFC-203ENST00000502773 BTNL3Q6UXE8 466 aa6.26□□□□□ -1.41
PDGFC-203ENST00000502773 TMEM182Q6ZP80 229 aaPredicted RBP6.26□□□□□ -1.41
PDGFC-203ENST00000502773 RNF144BQ7Z419 303 aa6.26□□□□□ -1.41
PDGFC-203ENST00000502773 OR2Z1Q8NG97 314 aa6.26□□□□□ -1.41
PDGFC-203ENST00000502773 VN1R17PQ8TDU5 208 aa6.26□□□□□ -1.41
PDGFC-203ENST00000502773 ZNF665Q9H7R5 613 aa6.26□□□□□ -1.41
PDGFC-203ENST00000502773 A0A1B0GW15 77 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 C16orf97H3BN30 126 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 H7BYZ3 331 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 YPEL1O60688 119 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 GOSR1O95249 250 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 CECR9P0C854 216 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 PSMB3P49720 205 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 GPR146Q96CH1 333 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 YPEL2Q96QA6 119 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 BARX1Q9HBU1 254 aaPredicted RBP6.25□□□□□ -1.41
PDGFC-203ENST00000502773 SERTM2A0A1B0GWG4 89 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 RBFOX3A6NFN3 312 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 NTF3P20783 257 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 CEACAM8P31997 349 aaPredicted RBP6.25□□□□□ -1.41
PDGFC-203ENST00000502773 GUSBP1Q15486 140 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 C9orf106Q8NAJ2 232 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 DMBX1Q8NFW5 382 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 OR10W1Q8NGF6 305 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 OR52M1Q8NGK5 317 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 BORCS7Q96B45 105 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 SNHG12Q9BXW3 62 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 MANBALQ9NQG1 85 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 HBZP02008 142 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 CD5P06127 495 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 NBL1P41271 181 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 ASCL1P50553 236 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 DYNLT3P51808 116 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 PDCD1Q15116 288 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 PRAMEF5Q5TYX0 476 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 GFI1BQ5VTD9 330 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 PRAMEF6Q5VXH4 476 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 OR52E5Q8NH55 327 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 LYPD6BQ8NI32 183 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 OR2D2Q9H210 308 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 MSGN1A6NI15 193 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 ENSAO43768 121 aaKnown RBP6.25□□□□□ -1.41
PDGFC-203ENST00000502773 TRGC1P0CF51 173 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 PSG2P11465 335 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 ATP6V0CP27449 155 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 MPV17P39210 176 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 TNFAIP6P98066 277 aaPredicted RBP6.25□□□□□ -1.41
PDGFC-203ENST00000502773 TLE1Q04724 770 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 MEF2CQ06413 473 aaPredicted RBP6.25□□□□□ -1.41
PDGFC-203ENST00000502773 PCSK4Q6UW60 755 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 NUP37Q8NFH4 326 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 OR13D1Q8NGV5 346 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 RNASE8Q8TDE3 154 aaKnown RBP6.25□□□□□ -1.41
PDGFC-203ENST00000502773 TMEM190Q8WZ59 177 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 CLUHP3Q96NS8 147 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 MAGT1Q9H0U3 335 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 SLC25A15Q9Y619 301 aa6.25□□□□□ -1.41
PDGFC-203ENST00000502773 ZFP92A6NM28 416 aa6.24□□□□□ -1.41
PDGFC-203ENST00000502773 GCGP01275 180 aa6.24□□□□□ -1.41
PDGFC-203ENST00000502773 STAG3L2P0CL84 134 aa6.24□□□□□ -1.41
PDGFC-203ENST00000502773 GATA4P43694 442 aa6.24□□□□□ -1.41
PDGFC-203ENST00000502773 CEBPDP49716 269 aaPredicted RBP6.24□□□□□ -1.41
PDGFC-203ENST00000502773 COL10A1Q03692 680 aa6.24□□□□□ -1.41
PDGFC-203ENST00000502773 SLC38A11Q08AI6 406 aa6.24□□□□□ -1.41
PDGFC-203ENST00000502773 CDPF1Q6NVV7 123 aa6.24□□□□□ -1.41
PDGFC-203ENST00000502773 VWA1Q6PCB0 445 aa6.24□□□□□ -1.41
PDGFC-203ENST00000502773 FGFRL1Q8N441 504 aa6.24□□□□□ -1.41
PDGFC-203ENST00000502773 SIGLECL1Q8N7X8 197 aa6.24□□□□□ -1.41
PDGFC-203ENST00000502773 TVP23CQ96ET8 276 aa6.24□□□□□ -1.41
PDGFC-203ENST00000502773 TMEM204Q9BSN7 226 aa6.24□□□□□ -1.41
PDGFC-203ENST00000502773 CTDSP1Q9GZU7 261 aa6.24□□□□□ -1.41
PDGFC-203ENST00000502773 MS4A5Q9H3V2 200 aa6.24□□□□□ -1.41
PDGFC-203ENST00000502773 TMEM238LA0A1B0GVL6 79 aa6.24□□□□□ -1.41
PDGFC-203ENST00000502773 COLCA2A8K830 154 aa6.24□□□□□ -1.41
PDGFC-203ENST00000502773 M0QZ24 198 aa6.24□□□□□ -1.41
PDGFC-203ENST00000502773 SUB1P53999 127 aaKnown RBP eCLIP6.24□□□□□ -1.41
PDGFC-203ENST00000502773 PLP1P60201 277 aa6.24□□□□□ -1.41
PDGFC-203ENST00000502773 UNQ6494/PRO21346Q6UXR6 183 aa6.24□□□□□ -1.41
PDGFC-203ENST00000502773 DRAM1Q8N682 238 aa6.24□□□□□ -1.41
PDGFC-203ENST00000502773 VSTM2AQ8TAG5 236 aa6.24□□□□□ -1.41
PDGFC-203ENST00000502773 STARD4Q96DR4 205 aa6.24□□□□□ -1.41
PDGFC-203ENST00000502773 SLC35E1Q96K37 410 aa6.24□□□□□ -1.41
PDGFC-203ENST00000502773 TECTAO75443 2155 aa6.24□□□□□ -1.41
PDGFC-203ENST00000502773 A0A1W2PNU3 283 aaPredicted RBP6.24□□□□□ -1.41
PDGFC-203ENST00000502773 A0A1W2PPV4 95 aa6.24□□□□□ -1.41
PDGFC-203ENST00000502773 ODAMA1E959 279 aa6.24□□□□□ -1.41
PDGFC-203ENST00000502773 SRRM5B3KS81 715 aa6.24□□□□□ -1.41
PDGFC-203ENST00000502773 PDE6DO43924 150 aa6.24□□□□□ -1.41
PDGFC-203ENST00000502773 USF1P22415 310 aaPredicted RBP6.24□□□□□ -1.41
PDGFC-203ENST00000502773 TPTE2P1Q5T6R2 138 aa6.24□□□□□ -1.41
PDGFC-203ENST00000502773 KCNIP4Q6PIL6 250 aa6.24□□□□□ -1.41
PDGFC-203ENST00000502773 PRNDQ9UKY0 176 aa6.24□□□□□ -1.41
PDGFC-203ENST00000502773 SELENOKQ9Y6D0 94 aa6.24□□□□□ -1.41
PDGFC-203ENST00000502773 PHF3Q92576 2039 aaKnown RBP6.23□□□□□ -1.41
PDGFC-203ENST00000502773 CLDN34H7C241 214 aa6.23□□□□□ -1.41
PDGFC-203ENST00000502773 KCNAB3O43448 404 aa6.23□□□□□ -1.41
PDGFC-203ENST00000502773 RCC1P18754 421 aaPredicted RBP6.23□□□□□ -1.41
PDGFC-203ENST00000502773 ZNF83P51522 516 aa6.23□□□□□ -1.41
PDGFC-203ENST00000502773 PDLIM3Q53GG5 364 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms