RNA–Protein interactions for RNA: ENST00000498678.5

HOXB3-212, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HOXB3, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-212ENST00000498678 SPDEFO95238 335 aa21.35■■□□□ 1.01
HOXB3-212ENST00000498678 CD300LFQ8TDQ1 290 aa21.35■■□□□ 1.01
HOXB3-212ENST00000498678 MMP24Q9Y5R2 645 aa21.35■■□□□ 1.01
HOXB3-212ENST00000498678 GPR37O15354 613 aa21.34■■□□□ 1.01
HOXB3-212ENST00000498678 KRASP01116 189 aa21.34■■□□□ 1.01
HOXB3-212ENST00000498678 G6PCP35575 357 aa21.34■■□□□ 1.01
HOXB3-212ENST00000498678 OR8B3Q8NGG8 313 aa21.34■■□□□ 1.01
HOXB3-212ENST00000498678 PCNPQ8WW12 178 aaKnown RBP21.34■■□□□ 1.01
HOXB3-212ENST00000498678 NEIL1Q96FI4 390 aaPredicted RBP21.34■■□□□ 1.01
HOXB3-212ENST00000498678 OR8B2Q96RD0 313 aa21.34■■□□□ 1.01
HOXB3-212ENST00000498678 ZNF471Q9BX82 626 aaPredicted RBP21.34■■□□□ 1.01
HOXB3-212ENST00000498678 MAGT1Q9H0U3 335 aa21.34■■□□□ 1.01
HOXB3-212ENST00000498678 OR51M1Q9H341 326 aa21.34■■□□□ 1.01
HOXB3-212ENST00000498678 ZNF462Q96JM2 2506 aa21.34■■□□□ 1.01
HOXB3-212ENST00000498678 F5H0A9 414 aaPredicted RBP21.34■■□□□ 1.01
HOXB3-212ENST00000498678 P0C879 139 aa21.34■■□□□ 1.01
HOXB3-212ENST00000498678 C11orf42Q8N5U0 333 aa21.34■■□□□ 1.01
HOXB3-212ENST00000498678 ZNRD1Q9P1U0 126 aa21.34■■□□□ 1.01
HOXB3-212ENST00000498678 KIAA1324LA8MWY0 1029 aaPredicted RBP21.33■■□□□ 1.01
HOXB3-212ENST00000498678 NDUFS6O75380 124 aaKnown RBP21.33■■□□□ 1.01
HOXB3-212ENST00000498678 NXPH3O95157 252 aa21.33■■□□□ 1.01
HOXB3-212ENST00000498678 S100A9P06702 114 aaKnown RBP21.33■■□□□ 1.01
HOXB3-212ENST00000498678 P2RY1P47900 373 aa21.33■■□□□ 1.01
HOXB3-212ENST00000498678 UBA52P62987 128 aaKnown RBP21.33■■□□□ 1.01
HOXB3-212ENST00000498678 DDB2Q92466 427 aa21.33■■□□□ 1.01
HOXB3-212ENST00000498678 FCGR3BO75015 233 aa21.33■■□□□ 1
HOXB3-212ENST00000498678 WDR25Q64LD2 544 aaPredicted RBP21.33■■□□□ 1
HOXB3-212ENST00000498678 SPOCK3Q9BQ16 436 aa21.33■■□□□ 1
HOXB3-212ENST00000498678 CYTL1Q9NRR1 136 aa21.33■■□□□ 1
HOXB3-212ENST00000498678 FLNCQ14315 2725 aa21.33■■□□□ 1
HOXB3-212ENST00000498678 EFNA4P52798 201 aa21.32■■□□□ 1
HOXB3-212ENST00000498678 RAB39BQ96DA2 213 aa21.32■■□□□ 1
HOXB3-212ENST00000498678 USP9XQ93008 2570 aaPredicted RBP21.32■■□□□ 1
HOXB3-212ENST00000498678 OVOL3O00110 214 aa21.31■■□□□ 1
HOXB3-212ENST00000498678 SSSCA1O60232 199 aa21.31■■□□□ 1
HOXB3-212ENST00000498678 ATG12O94817 140 aa21.31■■□□□ 1
HOXB3-212ENST00000498678 ALKAL2Q6UX46 152 aa21.31■■□□□ 1
HOXB3-212ENST00000498678 STPG2Q8N412 459 aa21.31■■□□□ 1
HOXB3-212ENST00000498678 SRSF1Q07955 248 aaKnown RBP eCLIP21.31■■□□□ 12e-6■■□□□ 13
HOXB3-212ENST00000498678 S1PR3Q99500 378 aa21.31■■□□□ 1
HOXB3-212ENST00000498678 RBFOX2O43251 390 aaKnown RBP eCLIP21.3■■□□□ 1
HOXB3-212ENST00000498678 IGHV1-8P0DP01 117 aa21.3■■□□□ 1
HOXB3-212ENST00000498678 TLE4Q04727 773 aa21.3■■□□□ 1
HOXB3-212ENST00000498678 NANPQ8TBE9 248 aa21.3■■□□□ 1
HOXB3-212ENST00000498678 PATZ1Q9HBE1 687 aaKnown RBP21.3■■□□□ 1
HOXB3-212ENST00000498678 MALRD1Q5VYJ5 2156 aa21.3■■□□□ 1
HOXB3-212ENST00000498678 A0A087X0M5 115 aa21.3■■□□□ 1
HOXB3-212ENST00000498678 A0A1B0GX30 115 aa21.3■■□□□ 1
HOXB3-212ENST00000498678 CHST1O43916 411 aa21.3■■□□□ 1
HOXB3-212ENST00000498678 HPRT1P00492 218 aa21.3■■□□□ 1
HOXB3-212ENST00000498678 NMBP08949 121 aa21.3■■□□□ 1
HOXB3-212ENST00000498678 PVALBP20472 110 aaPredicted RBP21.3■■□□□ 1
HOXB3-212ENST00000498678 GPR157Q5UAW9 335 aa21.3■■□□□ 1
HOXB3-212ENST00000498678 C8orf46Q8TAG6 207 aa21.3■■□□□ 1
HOXB3-212ENST00000498678 RAB19A4D1S5 217 aa21.29■■□□□ 1
HOXB3-212ENST00000498678 GPR137BO60478 399 aa21.29■■□□□ 1
HOXB3-212ENST00000498678 TMEM50AO95807 157 aa21.29■■□□□ 1
HOXB3-212ENST00000498678 THBS3P49746 956 aa21.29■■□□□ 1
HOXB3-212ENST00000498678 C8orf31Q8N9H6 132 aa21.29■■□□□ 1
HOXB3-212ENST00000498678 ZNF383Q8NA42 475 aa21.29■■□□□ 1
HOXB3-212ENST00000498678 ZNF596Q8TC21 504 aa21.29■■□□□ 1
HOXB3-212ENST00000498678 SCARB1Q8WTV0 552 aa21.29■■□□□ 1
HOXB3-212ENST00000498678 SFT2D1Q8WV19 159 aa21.29■■□□□ 1
HOXB3-212ENST00000498678 SPTAN1Q13813 2472 aaKnown RBP21.29■■□□□ 1
HOXB3-212ENST00000498678 MMP9P14780 707 aa21.29■■□□□ 1
HOXB3-212ENST00000498678 KIR2DS2P43631 304 aa21.29■■□□□ 1
HOXB3-212ENST00000498678 GPR6P46095 362 aaPredicted RBP21.29■■□□□ 1
HOXB3-212ENST00000498678 ADTRPQ96IZ2 230 aa21.29■■□□□ 1
HOXB3-212ENST00000498678 DOCK11Q5JSL3 2073 aa21.28■■□□□ 1
HOXB3-212ENST00000498678 PPIAL4CA0A0B4J2A2 164 aa21.28■■□□□ 1
HOXB3-212ENST00000498678 MARCH11A6NNE9 402 aa21.28■■□□□ 1
HOXB3-212ENST00000498678 PPIAL4GP0DN37 164 aa21.28■■□□□ 1
HOXB3-212ENST00000498678 MIDNQ504T8 468 aa21.28■■□□□ 1
HOXB3-212ENST00000498678 ATRAIDQ6UW56 229 aa21.28■■□□□ 1
HOXB3-212ENST00000498678 LINC00311Q8N616 119 aa21.28■■□□□ 1
HOXB3-212ENST00000498678 OR2C3Q8N628 320 aa21.28■■□□□ 1
HOXB3-212ENST00000498678 STOML3Q8TAV4 291 aa21.28■■□□□ 1
HOXB3-212ENST00000498678 IGFBPL1Q8WX77 278 aa21.28■■□□□ 1
HOXB3-212ENST00000498678 R3HDM4Q96D70 268 aa21.28■■□□□ 1
HOXB3-212ENST00000498678 J3QR06 171 aa21.27■■□□□ 1
HOXB3-212ENST00000498678 TAAR5O14804 337 aa21.27■■□□□ 1
HOXB3-212ENST00000498678 CLEC9AQ6UXN8 241 aa21.27■■□□□ 1
HOXB3-212ENST00000498678 BSCL2Q96G97 398 aaPredicted RBP21.27■■□□□ 1
HOXB3-212ENST00000498678 PAX9P55771 341 aa21.27■■□□□ 1
HOXB3-212ENST00000498678 VAMP2P63027 116 aa21.27■■□□□ 1
HOXB3-212ENST00000498678 ZNF833PQ6ZTB9 187 aa21.27■■□□□ 1
HOXB3-212ENST00000498678 H2BFWTQ7Z2G1 175 aa21.27■■□□□ 1
HOXB3-212ENST00000498678 LY6G5BQ8NDX9 201 aa21.27■■□□□ 1
HOXB3-212ENST00000498678 NKX6-2Q9C056 277 aaPredicted RBP21.27■■□□□ 1
HOXB3-212ENST00000498678 LYRM2Q9NU23 88 aaPredicted RBP21.27■■□□□ 1
HOXB3-212ENST00000498678 FBXL17Q9UF56 701 aa21.27■■□□□ 1
HOXB3-212ENST00000498678 COL12A1Q99715 3063 aa21.26■□□□□ 0.99
HOXB3-212ENST00000498678 FAM24AA6NFZ4 105 aa21.26■□□□□ 0.99
HOXB3-212ENST00000498678 CT45A6P0DMU7 189 aa21.26■□□□□ 0.99
HOXB3-212ENST00000498678 CT45A5P0DMU8 189 aa21.26■□□□□ 0.99
HOXB3-212ENST00000498678 CT45A7P0DMV0 189 aa21.26■□□□□ 0.99
HOXB3-212ENST00000498678 TMEM133Q9H2Q1 129 aa21.26■□□□□ 0.99
HOXB3-212ENST00000498678 MYO18BQ8IUG5 2567 aa21.26■□□□□ 0.99
HOXB3-212ENST00000498678 A0A1W2PPH5 198 aa21.26■□□□□ 0.99
HOXB3-212ENST00000498678 FAM74A7A6NL05 159 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms