RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 NDUFA11Q86Y39 141 aa8.85□□□□□ -0.99
ERCC8-208ENST00000497892 KRTAP19-1Q8IUB9 90 aa8.85□□□□□ -0.99
ERCC8-208ENST00000497892 LYSMD2Q8IV50 215 aa8.85□□□□□ -0.99
ERCC8-208ENST00000497892 BVESQ8NE79 360 aa8.85□□□□□ -0.99
ERCC8-208ENST00000497892 OR5H2Q8NGV7 314 aa8.85□□□□□ -0.99
ERCC8-208ENST00000497892 C15orf40Q8WUR7 153 aa8.85□□□□□ -0.99
ERCC8-208ENST00000497892 GIMAP1Q8WWP7 306 aa8.85□□□□□ -0.99
ERCC8-208ENST00000497892 FLYWCH2Q96CP2 140 aaKnown RBP8.85□□□□□ -0.99
ERCC8-208ENST00000497892 TSNAXQ99598 290 aaKnown RBP8.85□□□□□ -0.99
ERCC8-208ENST00000497892 FBXL15Q9H469 300 aa8.85□□□□□ -0.99
ERCC8-208ENST00000497892 EHFQ9NZC4 300 aa8.85□□□□□ -0.99
ERCC8-208ENST00000497892 LINC00527Q9UJ94 153 aa8.85□□□□□ -0.99
ERCC8-208ENST00000497892 PLXNB1O43157 2135 aa8.84□□□□□ -0.99
ERCC8-208ENST00000497892 IGHV7-81A0A0B4J1V7 117 aa8.84□□□□□ -0.99
ERCC8-208ENST00000497892 ZNF701M0R085 212 aaPredicted RBP8.84□□□□□ -0.99
ERCC8-208ENST00000497892 PMP2P02689 132 aa8.84□□□□□ -0.99
ERCC8-208ENST00000497892 CSF1P09603 554 aa8.84□□□□□ -0.99
ERCC8-208ENST00000497892 RRASP10301 218 aa8.84□□□□□ -0.99
ERCC8-208ENST00000497892 HRH1P35367 487 aa8.84□□□□□ -0.99
ERCC8-208ENST00000497892 RFX2P48378 723 aa8.84□□□□□ -0.99
ERCC8-208ENST00000497892 SLC35B1P78383 322 aa8.84□□□□□ -0.99
ERCC8-208ENST00000497892 CFHR3Q02985 330 aa8.84□□□□□ -0.99
ERCC8-208ENST00000497892 CBX3Q13185 183 aa8.84□□□□□ -0.99
ERCC8-208ENST00000497892 TMEM177Q53S58 311 aa8.84□□□□□ -0.99
ERCC8-208ENST00000497892 DHRS11Q6UWP2 260 aa8.84□□□□□ -0.99
ERCC8-208ENST00000497892 ZNF329Q86UD4 541 aa8.84□□□□□ -0.99
ERCC8-208ENST00000497892 COMMD1Q8N668 190 aa8.84□□□□□ -0.99
ERCC8-208ENST00000497892 SECTM1Q8WVN6 248 aa8.84□□□□□ -0.99
ERCC8-208ENST00000497892 HARBI1Q96MB7 349 aa8.84□□□□□ -0.99
ERCC8-208ENST00000497892 ABHD1Q96SE0 405 aa8.84□□□□□ -0.99
ERCC8-208ENST00000497892 HSD17B10Q99714 261 aaKnown RBP8.84□□□□□ -0.99
ERCC8-208ENST00000497892 GON7Q9BXV9 100 aa8.84□□□□□ -0.99
ERCC8-208ENST00000497892 NXF2Q9GZY0 626 aaKnown RBP8.84□□□□□ -0.99
ERCC8-208ENST00000497892 MMP27Q9H306 513 aa8.84□□□□□ -0.99
ERCC8-208ENST00000497892 OR51J1Q9H342 316 aa8.84□□□□□ -0.99
ERCC8-208ENST00000497892 METTL1Q9UBP6 276 aaKnown RBP8.84□□□□□ -0.99
ERCC8-208ENST00000497892 RSL24D1Q9UHA3 163 aaKnown RBP8.84□□□□□ -0.99
ERCC8-208ENST00000497892 CCDC160A6NGH7 325 aa8.83□□□□□ -1
ERCC8-208ENST00000497892 ATP6V0E1O15342 81 aa8.83□□□□□ -1
ERCC8-208ENST00000497892 SLC25A17O43808 307 aa8.83□□□□□ -1
ERCC8-208ENST00000497892 IGLV2-23P01705 113 aa8.83□□□□□ -1
ERCC8-208ENST00000497892 OPN1MWP04001 364 aa8.83□□□□□ -1
ERCC8-208ENST00000497892 OPN1MW2P0DN77 364 aa8.83□□□□□ -1
ERCC8-208ENST00000497892 OPN1MW3P0DN78 364 aa8.83□□□□□ -1
ERCC8-208ENST00000497892 HLA-DMAP28067 261 aa8.83□□□□□ -1
ERCC8-208ENST00000497892 LGALS7P47929 136 aa8.83□□□□□ -1
ERCC8-208ENST00000497892 FXYD4P59646 89 aa8.83□□□□□ -1
ERCC8-208ENST00000497892 HERV-K104P61576 105 aa8.83□□□□□ -1
ERCC8-208ENST00000497892 RPS16P62249 146 aaKnown RBP8.83□□□□□ -1
ERCC8-208ENST00000497892 RPL30P62888 115 aaKnown RBP8.83□□□□□ -1
ERCC8-208ENST00000497892 NDPQ00604 133 aa8.83□□□□□ -1
ERCC8-208ENST00000497892 PLGLAQ15195 96 aa8.83□□□□□ -1
ERCC8-208ENST00000497892 ZNF66Q6ZN08 573 aa8.83□□□□□ -1
ERCC8-208ENST00000497892 TMEM17Q86X19 198 aa8.83□□□□□ -1
ERCC8-208ENST00000497892 ZBTB34Q8NCN2 500 aa8.83□□□□□ -1
ERCC8-208ENST00000497892 OR52I2Q8NH67 350 aa8.83□□□□□ -1
ERCC8-208ENST00000497892 MCFD2Q8NI22 146 aa8.83□□□□□ -1
ERCC8-208ENST00000497892 OSR1Q8TAX0 266 aaPredicted RBP8.83□□□□□ -1
ERCC8-208ENST00000497892 MOB3AQ96BX8 217 aa8.83□□□□□ -1
ERCC8-208ENST00000497892 C6orf62Q9GZU0 229 aaPredicted RBP8.83□□□□□ -1
ERCC8-208ENST00000497892 SLC5A7Q9GZV3 580 aa8.83□□□□□ -1
ERCC8-208ENST00000497892 PARP11Q9NR21 331 aa8.83□□□□□ -1
ERCC8-208ENST00000497892 CCL28Q9NRJ3 127 aa8.83□□□□□ -1
ERCC8-208ENST00000497892 TAS2R8Q9NYW2 309 aa8.83□□□□□ -1
ERCC8-208ENST00000497892 PRELID3BQ9Y3B1 194 aa8.83□□□□□ -1
ERCC8-208ENST00000497892 TSSC4Q9Y5U2 329 aaPredicted RBP8.83□□□□□ -1
ERCC8-208ENST00000497892 TCRBV4S1A1TA0A5B7 111 aa8.82□□□□□ -1
ERCC8-208ENST00000497892 FCN1O00602 326 aa8.82□□□□□ -1
ERCC8-208ENST00000497892 SHOXO15266 292 aa8.82□□□□□ -1
ERCC8-208ENST00000497892 CRYZL1O95825 349 aa8.82□□□□□ -1
ERCC8-208ENST00000497892 IGHG4P01861 327 aa8.82□□□□□ -1
ERCC8-208ENST00000497892 CRYGBP07316 175 aa8.82□□□□□ -1
ERCC8-208ENST00000497892 VDAC1P21796 283 aa8.82□□□□□ -1
ERCC8-208ENST00000497892 CRIP2P52943 208 aaPredicted RBP8.82□□□□□ -1
ERCC8-208ENST00000497892 CX3CL1P78423 397 aa8.82□□□□□ -1
ERCC8-208ENST00000497892 MRPS10P82664 201 aaKnown RBP8.82□□□□□ -1
ERCC8-208ENST00000497892 NSUN5P1Q3KNT7 163 aa8.82□□□□□ -1
ERCC8-208ENST00000497892 ACTBL2Q562R1 376 aa8.82□□□□□ -1
ERCC8-208ENST00000497892 RNASE12Q5GAN4 147 aaKnown RBP8.82□□□□□ -1
ERCC8-208ENST00000497892 VAX1Q5SQQ9 334 aa8.82□□□□□ -1
ERCC8-208ENST00000497892 TEX38Q6PEX7 206 aa8.82□□□□□ -1
ERCC8-208ENST00000497892 PPP1R27Q86WC6 154 aa8.82□□□□□ -1
ERCC8-208ENST00000497892 RNF152Q8N8N0 203 aa8.82□□□□□ -1
ERCC8-208ENST00000497892 OR6F1Q8NGZ6 308 aa8.82□□□□□ -1
ERCC8-208ENST00000497892 TCTEX1D2Q8WW35 142 aa8.82□□□□□ -1
ERCC8-208ENST00000497892 BORCS5Q969J3 196 aa8.82□□□□□ -1
ERCC8-208ENST00000497892 DIRAS2Q96HU8 199 aa8.82□□□□□ -1
ERCC8-208ENST00000497892 ZNF2Q9BSG1 426 aaPredicted RBP8.82□□□□□ -1
ERCC8-208ENST00000497892 FXYD6Q9H0Q3 95 aa8.82□□□□□ -1
ERCC8-208ENST00000497892 RABL2AQ9UBK7 228 aaPredicted RBP8.82□□□□□ -1
ERCC8-208ENST00000497892 KLK11Q9UBX7 282 aa8.82□□□□□ -1
ERCC8-208ENST00000497892 MTFP1Q9UDX5 166 aa8.82□□□□□ -1
ERCC8-208ENST00000497892 RABL2BQ9UNT1 228 aa8.82□□□□□ -1
ERCC8-208ENST00000497892 FBXO7Q9Y3I1 522 aa8.82□□□□□ -1
ERCC8-208ENST00000497892 NOTCH1P46531 2555 aa8.82□□□□□ -1
ERCC8-208ENST00000497892 TRAV41A0A0B4J266 112 aa8.81□□□□□ -1
ERCC8-208ENST00000497892 SRRM4A7MD48 611 aaKnown RBP8.81□□□□□ -1
ERCC8-208ENST00000497892 GABARAPH6UMI1 98 aa8.81□□□□□ -1
ERCC8-208ENST00000497892 TNFSF12O43508 249 aa8.81□□□□□ -1
ERCC8-208ENST00000497892 FCGR3BO75015 233 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms