RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 TMEM200BQ69YZ2 307 aa16.17■□□□□ 0.18
ACTN4-208ENST00000497637 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.17■□□□□ 0.18
ACTN4-208ENST00000497637 ZNF439Q8NDP4 499 aa16.17■□□□□ 0.18
ACTN4-208ENST00000497637 ARPC5LQ9BPX5 153 aa16.17■□□□□ 0.18
ACTN4-208ENST00000497637 IFI27L2Q9H2X8 130 aa16.17■□□□□ 0.18
ACTN4-208ENST00000497637 GAL3ST2Q9H3Q3 398 aa16.17■□□□□ 0.18
ACTN4-208ENST00000497637 PLEKHA2Q9HB19 425 aa16.17■□□□□ 0.18
ACTN4-208ENST00000497637 NSG2Q9Y328 171 aa16.17■□□□□ 0.18
ACTN4-208ENST00000497637 TMEM89A2RUT3 159 aa16.16■□□□□ 0.18
ACTN4-208ENST00000497637 PITX3O75364 302 aa16.16■□□□□ 0.18
ACTN4-208ENST00000497637 SCGB1D2O95969 90 aa16.16■□□□□ 0.18
ACTN4-208ENST00000497637 NKX2-1P43699 371 aaPredicted RBP16.16■□□□□ 0.18
ACTN4-208ENST00000497637 ZNF134P52741 427 aa16.16■□□□□ 0.18
ACTN4-208ENST00000497637 UBA52P62987 128 aaKnown RBP16.16■□□□□ 0.18
ACTN4-208ENST00000497637 ZNF273Q14593 569 aa16.16■□□□□ 0.18
ACTN4-208ENST00000497637 FOXRED2Q8IWF2 684 aa16.16■□□□□ 0.18
ACTN4-208ENST00000497637 ABHD14AQ9BUJ0 271 aa16.16■□□□□ 0.18
ACTN4-208ENST00000497637 C11orf1Q9H5F2 150 aa16.16■□□□□ 0.18
ACTN4-208ENST00000497637 UBQLN2Q9UHD9 624 aa16.16■□□□□ 0.18
ACTN4-208ENST00000497637 FAM157AC9JC47 383 aa16.15■□□□□ 0.18
ACTN4-208ENST00000497637 ATP6V1G1O75348 118 aa16.15■□□□□ 0.18
ACTN4-208ENST00000497637 PROP1O75360 226 aa16.15■□□□□ 0.18
ACTN4-208ENST00000497637 ATG12O94817 140 aa16.15■□□□□ 0.18
ACTN4-208ENST00000497637 IGKV1-5P01602 117 aa16.15■□□□□ 0.18
ACTN4-208ENST00000497637 HKR1P10072 659 aa16.15■□□□□ 0.18
ACTN4-208ENST00000497637 MMP9P14780 707 aa16.15■□□□□ 0.18
ACTN4-208ENST00000497637 ID3Q02535 119 aa16.15■□□□□ 0.18
ACTN4-208ENST00000497637 CT45A1Q5HYN5 189 aa16.15■□□□□ 0.18
ACTN4-208ENST00000497637 PRAMEF5Q5TYX0 476 aa16.15■□□□□ 0.18
ACTN4-208ENST00000497637 HEPN1Q6WQI6 88 aa16.15■□□□□ 0.18
ACTN4-208ENST00000497637 FAM219AQ8IW50 185 aa16.15■□□□□ 0.18
ACTN4-208ENST00000497637 DMBX1Q8NFW5 382 aa16.15■□□□□ 0.18
ACTN4-208ENST00000497637 CT45A3Q8NHU0 189 aa16.15■□□□□ 0.18
ACTN4-208ENST00000497637 TCTEX1D2Q8WW35 142 aa16.15■□□□□ 0.18
ACTN4-208ENST00000497637 ZNF714Q96N38 554 aa16.15■□□□□ 0.18
ACTN4-208ENST00000497637 RCL1Q9Y2P8 373 aaKnown RBP16.15■□□□□ 0.18
ACTN4-208ENST00000497637 TRBV23-1A0A0A0MS06 115 aa16.14■□□□□ 0.17
ACTN4-208ENST00000497637 A0A0G2JRQ6 117 aa16.14■□□□□ 0.17
ACTN4-208ENST00000497637 MSGN1A6NI15 193 aa16.14■□□□□ 0.17
ACTN4-208ENST00000497637 C17orf98A8MV24 154 aa16.14■□□□□ 0.17
ACTN4-208ENST00000497637 SLC31A2O15432 143 aa16.14■□□□□ 0.17
ACTN4-208ENST00000497637 MMP23AO75900 390 aa16.14■□□□□ 0.17
ACTN4-208ENST00000497637 DAOP14920 347 aa16.14■□□□□ 0.17
ACTN4-208ENST00000497637 DUTP33316 252 aaKnown RBP16.14■□□□□ 0.17
ACTN4-208ENST00000497637 HTR2BP41595 481 aa16.14■□□□□ 0.17
ACTN4-208ENST00000497637 P2RY1P47900 373 aa16.14■□□□□ 0.17
ACTN4-208ENST00000497637 BRWD1-AS2P59051 145 aa16.14■□□□□ 0.17
ACTN4-208ENST00000497637 SCGB2A2Q13296 93 aa16.14■□□□□ 0.17
ACTN4-208ENST00000497637 BTNL3Q6UXE8 466 aa16.14■□□□□ 0.17
ACTN4-208ENST00000497637 SPAG16Q8N0X2 631 aa16.14■□□□□ 0.17
ACTN4-208ENST00000497637 CD300LFQ8TDQ1 290 aa16.14■□□□□ 0.17
ACTN4-208ENST00000497637 H1FXQ92522 213 aaKnown RBP16.14■□□□□ 0.17
ACTN4-208ENST00000497637 PIMREGQ9BSJ6 248 aa16.14■□□□□ 0.17
ACTN4-208ENST00000497637 VWC2LB2RUY7 222 aa16.13■□□□□ 0.17
ACTN4-208ENST00000497637 GPR37O15354 613 aa16.13■□□□□ 0.17
ACTN4-208ENST00000497637 NFYBP25208 207 aa16.13■□□□□ 0.17
ACTN4-208ENST00000497637 RPL12P30050 165 aaKnown RBP16.13■□□□□ 0.17
ACTN4-208ENST00000497637 PDLIM4P50479 330 aa16.13■□□□□ 0.17
ACTN4-208ENST00000497637 DLX6P56179 175 aa16.13■□□□□ 0.17
ACTN4-208ENST00000497637 TMEM155Q4W5P6 130 aa16.13■□□□□ 0.17
ACTN4-208ENST00000497637 UTF1Q5T230 341 aa16.13■□□□□ 0.17
ACTN4-208ENST00000497637 GPR157Q5UAW9 335 aa16.13■□□□□ 0.17
ACTN4-208ENST00000497637 RNASE11Q8TAA1 199 aaKnown RBP16.13■□□□□ 0.17
ACTN4-208ENST00000497637 ST8SIA2Q92186 375 aa16.13■□□□□ 0.17
ACTN4-208ENST00000497637 RAB1CQ92928 201 aa16.13■□□□□ 0.17
ACTN4-208ENST00000497637 TIMD4Q96H15 378 aa16.13■□□□□ 0.17
ACTN4-208ENST00000497637 MIOXQ9UGB7 285 aa16.13■□□□□ 0.17
ACTN4-208ENST00000497637 MMP24Q9Y5R2 645 aa16.13■□□□□ 0.17
ACTN4-208ENST00000497637 LINC00473A8K010 186 aa16.12■□□□□ 0.17
ACTN4-208ENST00000497637 F5H0A9 414 aaPredicted RBP16.12■□□□□ 0.17
ACTN4-208ENST00000497637 M0R1X1 148 aa16.12■□□□□ 0.17
ACTN4-208ENST00000497637 TAAR5O14804 337 aa16.12■□□□□ 0.17
ACTN4-208ENST00000497637 GPR137BO60478 399 aa16.12■□□□□ 0.17
ACTN4-208ENST00000497637 VENTXO95231 258 aa16.12■□□□□ 0.17
ACTN4-208ENST00000497637 P0C879 139 aa16.12■□□□□ 0.17
ACTN4-208ENST00000497637 KIR2DS2P43631 304 aa16.12■□□□□ 0.17
ACTN4-208ENST00000497637 CXorf66Q5JRM2 361 aaPredicted RBP16.12■□□□□ 0.17
ACTN4-208ENST00000497637 NCR3LG1Q68D85 454 aa16.12■□□□□ 0.17
ACTN4-208ENST00000497637 ZNF841Q6ZN19 808 aa16.12■□□□□ 0.17
ACTN4-208ENST00000497637 SLC25A48Q6ZT89 311 aaKnown RBP16.12■□□□□ 0.17
ACTN4-208ENST00000497637 SLC7A5P1Q8MH63 180 aa16.12■□□□□ 0.17
ACTN4-208ENST00000497637 SCARB1Q8WTV0 552 aa16.12■□□□□ 0.17
ACTN4-208ENST00000497637 RAB39BQ96DA2 213 aa16.12■□□□□ 0.17
ACTN4-208ENST00000497637 CYTL1Q9NRR1 136 aa16.12■□□□□ 0.17
ACTN4-208ENST00000497637 RAB29O14966 203 aa16.11■□□□□ 0.17
ACTN4-208ENST00000497637 RBFOX2O43251 390 aaKnown RBP eCLIP16.11■□□□□ 0.179e-8■■■■□ 21.3
ACTN4-208ENST00000497637 CCL3L1P16619 93 aa16.11■□□□□ 0.17
ACTN4-208ENST00000497637 PVALBP20472 110 aaPredicted RBP16.11■□□□□ 0.17
ACTN4-208ENST00000497637 EPHA1P21709 976 aa16.11■□□□□ 0.17
ACTN4-208ENST00000497637 AKR1C2P52895 323 aa16.11■□□□□ 0.17
ACTN4-208ENST00000497637 TMEM33P57088 247 aa16.11■□□□□ 0.17
ACTN4-208ENST00000497637 CLLU1Q5K131 121 aa16.11■□□□□ 0.17
ACTN4-208ENST00000497637 Q6ZRM9 215 aa16.11■□□□□ 0.17
ACTN4-208ENST00000497637 ODF3L1Q8IXM7 274 aa16.11■□□□□ 0.17
ACTN4-208ENST00000497637 STOML3Q8TAV4 291 aa16.11■□□□□ 0.17
ACTN4-208ENST00000497637 LEAP2Q969E1 77 aa16.11■□□□□ 0.17
ACTN4-208ENST00000497637 ADTRPQ96IZ2 230 aa16.11■□□□□ 0.17
ACTN4-208ENST00000497637 ZNF471Q9BX82 626 aaPredicted RBP16.11■□□□□ 0.17
ACTN4-208ENST00000497637 COA4Q9NYJ1 87 aa16.11■□□□□ 0.17
ACTN4-208ENST00000497637 CACNG5Q9UF02 275 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms