RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, human

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3C-208	ENST00000497368	ECSCR	Q19T08	205 aa		4.2	□□□□□ -1.74
UBE3C-208	ENST00000497368	ZNF260	Q3ZCT1	412 aa		4.2	□□□□□ -1.74
UBE3C-208	ENST00000497368	DEFB121	Q5J5C9	76 aa		4.2	□□□□□ -1.74
UBE3C-208	ENST00000497368	RBM48	Q5RL73	367 aa	Known RBP	4.2	□□□□□ -1.74
UBE3C-208	ENST00000497368	LIPK	Q5VXJ0	399 aa		4.2	□□□□□ -1.74
UBE3C-208	ENST00000497368	CD200R1L	Q6Q8B3	271 aa		4.2	□□□□□ -1.74
UBE3C-208	ENST00000497368	ADAMTSL5	Q6ZMM2	481 aa		4.2	□□□□□ -1.74
UBE3C-208	ENST00000497368	C19orf35	Q6ZS72	473 aa		4.2	□□□□□ -1.74
UBE3C-208	ENST00000497368	DRAXIN	Q8NBI3	349 aa	Predicted RBP	4.2	□□□□□ -1.74
UBE3C-208	ENST00000497368	DDB2	Q92466	427 aa		4.2	□□□□□ -1.74
UBE3C-208	ENST00000497368	ARPC1A	Q92747	370 aa		4.2	□□□□□ -1.74
UBE3C-208	ENST00000497368	PTX4	Q96A99	478 aa		4.2	□□□□□ -1.74
UBE3C-208	ENST00000497368	ARHGAP5-AS1	Q96IT6	56 aa		4.2	□□□□□ -1.74
UBE3C-208	ENST00000497368	RASL11B	Q9BPW5	248 aa		4.2	□□□□□ -1.74
UBE3C-208	ENST00000497368	CABLES2	Q9BTV7	478 aa		4.2	□□□□□ -1.74
UBE3C-208	ENST00000497368	MCRIP2	Q9BUT9	160 aa	Known RBP	4.2	□□□□□ -1.74
UBE3C-208	ENST00000497368	PECR	Q9BY49	303 aa		4.2	□□□□□ -1.74
UBE3C-208	ENST00000497368	GPR61	Q9BZJ8	451 aa		4.2	□□□□□ -1.74
UBE3C-208	ENST00000497368		Q9N2K0	584 aa		4.2	□□□□□ -1.74
UBE3C-208	ENST00000497368	VSIG4	Q9Y279	399 aa		4.2	□□□□□ -1.74
UBE3C-208	ENST00000497368	ZNF256	Q9Y2P7	627 aa	Predicted RBP	4.2	□□□□□ -1.74
UBE3C-208	ENST00000497368	AK6	Q9Y3D8	172 aa	Known RBP	4.2	□□□□□ -1.74
UBE3C-208	ENST00000497368	COX11	Q9Y6N1	276 aa		4.2	□□□□□ -1.74
UBE3C-208	ENST00000497368		U3KQK5	164 aa		4.2	□□□□□ -1.74
UBE3C-208	ENST00000497368	TMEM272	A0A1B0GTI8	110 aa		4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368		A0A1W2PN81	502 aa		4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368	OR5H14	A6NHG9	310 aa		4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368	SRRM4	A7MD48	611 aa	Known RBP	4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368	EBAG9	O00559	213 aa		4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368	MPPED1	O15442	326 aa		4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368	RRP9	O43818	475 aa	Known RBP	4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368	RAMP3	O60896	148 aa		4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368	IGLV2-14	P01704	120 aa		4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368	IGHV3-11	P01762	117 aa		4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368	FRMD6-AS1	P0C7T7	363 aa		4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368	UBB	P0CG47	229 aa		4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368	CRHBP	P24387	322 aa		4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368	CHRNA7	P36544	502 aa		4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368	ZNF45	Q02386	682 aa		4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368	EIF4EBP1	Q13541	118 aa	Predicted RBP	4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368	SPHAR	Q15513	63 aa		4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368	HSD17B12	Q53GQ0	312 aa		4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368	IGSF11	Q5DX21	431 aa		4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368	ACSM6	Q6P461	480 aa		4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368	MOB1B	Q7L9L4	216 aa		4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368	OVCH2	Q7RTZ1	564 aa		4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368	CEACAM19	Q7Z692	300 aa		4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368	STX19	Q8N4C7	294 aa		4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368	OR2AK2	Q8NG84	335 aa		4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368	OR6M1	Q8NGM8	313 aa		4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368	OR1N2	Q8NGR9	330 aa		4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368	MAFIP	Q8WZ33	124 aa		4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368	TMEM203	Q969S6	136 aa		4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368	ZNF414	Q96IQ9	312 aa		4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368	MYCBP	Q99417	103 aa	Predicted RBP	4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368	TM2D3	Q9BRN9	247 aa		4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368	MND1	Q9BWT6	205 aa		4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368	CST11	Q9H112	138 aa		4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368	EDA2R	Q9HAV5	297 aa		4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368	C8orf4	Q9NR00	106 aa		4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368	KIAA1456	Q9P272	454 aa		4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368	CKLF	Q9UBR5	152 aa		4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368	GHRL	Q9UBU3	117 aa		4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368	HSF4	Q9ULV5	492 aa		4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368	FOXA2	Q9Y261	457 aa	Predicted RBP	4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368	A3GALT2	U3KPV4	340 aa		4.19	□□□□□ -1.74
UBE3C-208	ENST00000497368	IZUMO1R	A6ND01	250 aa		4.18	□□□□□ -1.74
UBE3C-208	ENST00000497368	LINC00473	A8K010	186 aa		4.18	□□□□□ -1.74
UBE3C-208	ENST00000497368	RAB27B	O00194	218 aa		4.18	□□□□□ -1.74
UBE3C-208	ENST00000497368	OVOL1	O14753	267 aa		4.18	□□□□□ -1.74
UBE3C-208	ENST00000497368	IGLV1-51	P01701	117 aa		4.18	□□□□□ -1.74
UBE3C-208	ENST00000497368	FCGR3A	P08637	254 aa		4.18	□□□□□ -1.74
UBE3C-208	ENST00000497368	OR8U8	P0C7N1	319 aa		4.18	□□□□□ -1.74
UBE3C-208	ENST00000497368	GP9	P14770	177 aa		4.18	□□□□□ -1.74
UBE3C-208	ENST00000497368	SRM	P19623	302 aa		4.18	□□□□□ -1.74
UBE3C-208	ENST00000497368	MAPK3	P27361	379 aa	Predicted RBP	4.18	□□□□□ -1.74
UBE3C-208	ENST00000497368	VEGFC	P49767	419 aa		4.18	□□□□□ -1.74
UBE3C-208	ENST00000497368	ELL	P55199	621 aa	Predicted RBP	4.18	□□□□□ -1.74
UBE3C-208	ENST00000497368	BRWD1-AS2	P59051	145 aa		4.18	□□□□□ -1.74
UBE3C-208	ENST00000497368	MLLT11	Q13015	90 aa	Predicted RBP	4.18	□□□□□ -1.74
UBE3C-208	ENST00000497368	MED22	Q15528	200 aa		4.18	□□□□□ -1.74
UBE3C-208	ENST00000497368	C10orf55	Q5SWW7	151 aa		4.18	□□□□□ -1.74
UBE3C-208	ENST00000497368	HES5	Q5TA89	166 aa		4.18	□□□□□ -1.74
UBE3C-208	ENST00000497368	ZNF660	Q6AZW8	331 aa	Predicted RBP	4.18	□□□□□ -1.74
UBE3C-208	ENST00000497368	LIN54	Q6MZP7	749 aa		4.18	□□□□□ -1.74
UBE3C-208	ENST00000497368	MS4A15	Q8N5U1	240 aa		4.18	□□□□□ -1.74
UBE3C-208	ENST00000497368	LFNG	Q8NES3	379 aa		4.18	□□□□□ -1.74
UBE3C-208	ENST00000497368	IL1F10	Q8WWZ1	152 aa		4.18	□□□□□ -1.74
UBE3C-208	ENST00000497368	DPF1	Q92782	380 aa		4.18	□□□□□ -1.74
UBE3C-208	ENST00000497368	GALM	Q96C23	342 aa		4.18	□□□□□ -1.74
UBE3C-208	ENST00000497368	RCHY1	Q96PM5	261 aa		4.18	□□□□□ -1.74
UBE3C-208	ENST00000497368	S100A13	Q99584	98 aa		4.18	□□□□□ -1.74
UBE3C-208	ENST00000497368	TINAGL1	Q9GZM7	467 aa	Predicted RBP	4.18	□□□□□ -1.74
UBE3C-208	ENST00000497368	C12orf4	Q9NQ89	552 aa		4.18	□□□□□ -1.74
UBE3C-208	ENST00000497368	SDHAF2	Q9NX18	166 aa		4.18	□□□□□ -1.74
UBE3C-208	ENST00000497368	RDH8	Q9NYR8	311 aa		4.18	□□□□□ -1.74
UBE3C-208	ENST00000497368	RNF150	Q9ULK6	438 aa		4.18	□□□□□ -1.74
UBE3C-208	ENST00000497368	WASHC3	Q9Y3C0	194 aa		4.18	□□□□□ -1.74
UBE3C-208	ENST00000497368	TRBV6-7	A0A0A0MS04	114 aa		4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368	IGKV1D-13	A0A0B4J2D9	117 aa		4.17	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms