RNA–Protein interactions for RNA: ENST00000496818.2

CACNA1C-229, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-229ENST00000496818 CCL13Q99616 98 aa4.67□□□□□ -1.66
CACNA1C-229ENST00000496818 DCTN5Q9BTE1 182 aa4.67□□□□□ -1.66
CACNA1C-229ENST00000496818 RTL8AQ9BWD3 113 aa4.67□□□□□ -1.66
CACNA1C-229ENST00000496818 ZNF471Q9BX82 626 aaPredicted RBP4.67□□□□□ -1.66
CACNA1C-229ENST00000496818 PARP11Q9NR21 331 aa4.67□□□□□ -1.66
CACNA1C-229ENST00000496818 SLC25A10Q9UBX3 287 aaPredicted RBP4.67□□□□□ -1.66
CACNA1C-229ENST00000496818 DMRT1Q9Y5R6 373 aa4.67□□□□□ -1.66
CACNA1C-229ENST00000496818 TRAV14DV4A0A0A6YYC5 116 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 A0A1B0GW64 132 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 hCG_1809904A0A1W2PP81 198 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 A0A1W2PPE2 198 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 A0A1W2PR64 198 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 A0A1W2PRV1 198 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 MEIS3P1A6NDR6 274 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 C5orf52A6NGY3 159 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 FAM74A7A6NL05 159 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 TMEM210A6NLX4 147 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 TMEM14DPA8MWL7 114 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 JTBO76095 146 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 ACTL6BO94805 426 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 SIX6O95475 246 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 PRB2P02812 416 aaPredicted RBP4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 ZBTB25P24278 435 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 OTX1P32242 354 aaPredicted RBP4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 GLP1RP43220 463 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 LUMP51884 338 aaPredicted RBP4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 RAB2AP61019 212 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 PDZK1IP1Q13113 114 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 DHRS2Q13268 280 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 UNC119Q13432 240 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 SURF2Q15527 256 aaPredicted RBP4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 LY6EQ16553 131 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 NSUN5P1Q3KNT7 163 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 TMEM95Q3KNT9 176 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 MOGAT2Q3SYC2 334 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 FAM74A3Q4VXF1 159 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 RNASE10Q5GAN6 216 aaKnown RBP4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 STUMQ69YW2 141 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 SLC35E4Q6ICL7 350 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 DUX4L9Q6RFH8 374 aaPredicted RBP4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 ZNF600Q6ZNG1 722 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 C1orf122Q6ZSJ8 110 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 TRAPPC6BQ86SZ2 158 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 NDUFA11Q86Y39 141 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 FAM185AQ8N0U4 392 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 ARRDC1Q8N5I2 433 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 LY6G5BQ8NDX9 201 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 CCDC54Q8NEL0 328 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 CSNK2A3Q8NEV1 391 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 OR5AP2Q8NGF4 316 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 OR52N4Q8NGI2 321 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 OR13C8Q8NGS7 320 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 OR13D1Q8NGV5 346 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 RNASE11Q8TAA1 199 aaKnown RBP4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 NUDCD2Q8WVJ2 157 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 FGGYQ96C11 551 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 ADAT3Q96EY9 351 aaPredicted RBP4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 REEP6Q96HR9 211 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 PRR25Q96S07 402 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 NKX3-1Q99801 234 aaPredicted RBP4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 SSX3Q99909 188 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 NRIP2Q9BQI9 281 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 CHST6Q9GZX3 395 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 RGCCQ9H4X1 137 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 CENPMQ9NSP4 180 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 UQCC1Q9NVA1 299 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 TMED3Q9Y3Q3 217 aa4.66□□□□□ -1.66
CACNA1C-229ENST00000496818 hCG_38984A0A1B0GV85 526 aa4.65□□□□□ -1.67
CACNA1C-229ENST00000496818 C9orf170A2RU37 121 aa4.65□□□□□ -1.67
CACNA1C-229ENST00000496818 CXorf65A6NEN9 183 aa4.65□□□□□ -1.67
CACNA1C-229ENST00000496818 TMEM235A6NFC5 223 aa4.65□□□□□ -1.67
CACNA1C-229ENST00000496818 PCP4L1A6NKN8 68 aa4.65□□□□□ -1.67
CACNA1C-229ENST00000496818 CDIPTO14735 213 aa4.65□□□□□ -1.67
CACNA1C-229ENST00000496818 SIGLEC5O15389 551 aa4.65□□□□□ -1.67
CACNA1C-229ENST00000496818 MPPED1O15442 326 aa4.65□□□□□ -1.67
CACNA1C-229ENST00000496818 NDUFS6O75380 124 aaKnown RBP4.65□□□□□ -1.67
CACNA1C-229ENST00000496818 LHBP01229 141 aa4.65□□□□□ -1.67
CACNA1C-229ENST00000496818 IFNA17P01571 189 aa4.65□□□□□ -1.67
CACNA1C-229ENST00000496818 HLA-AP01891 365 aaKnown RBP4.65□□□□□ -1.67
CACNA1C-229ENST00000496818 CD5P06127 495 aa4.65□□□□□ -1.67
CACNA1C-229ENST00000496818 TMEM225BP0DP42 221 aa4.65□□□□□ -1.67
CACNA1C-229ENST00000496818 SELLP14151 372 aa4.65□□□□□ -1.67
CACNA1C-229ENST00000496818 RCC1P18754 421 aaPredicted RBP4.65□□□□□ -1.67
CACNA1C-229ENST00000496818 GLRA1P23415 457 aa4.65□□□□□ -1.67
CACNA1C-229ENST00000496818 PSMB6P28072 239 aa4.65□□□□□ -1.67
CACNA1C-229ENST00000496818 ZNF93P35789 620 aaPredicted RBP4.65□□□□□ -1.67
CACNA1C-229ENST00000496818 RPL35P42766 123 aaKnown RBP4.65□□□□□ -1.67
CACNA1C-229ENST00000496818 KIR2DS4P43632 304 aa4.65□□□□□ -1.67
CACNA1C-229ENST00000496818 GABRA2P47869 451 aa4.65□□□□□ -1.67
CACNA1C-229ENST00000496818 PRB3Q04118 309 aaPredicted RBP4.65□□□□□ -1.67
CACNA1C-229ENST00000496818 FOXI1Q12951 378 aa4.65□□□□□ -1.67
CACNA1C-229ENST00000496818 HNF4GQ14541 408 aa4.65□□□□□ -1.67
CACNA1C-229ENST00000496818 RSPO1Q2MKA7 263 aaPredicted RBP4.65□□□□□ -1.67
CACNA1C-229ENST00000496818 TMEM128Q5BJH2 165 aa4.65□□□□□ -1.67
CACNA1C-229ENST00000496818 VAX1Q5SQQ9 334 aa4.65□□□□□ -1.67
CACNA1C-229ENST00000496818 PRSS54Q6PEW0 395 aa4.65□□□□□ -1.67
CACNA1C-229ENST00000496818 Q6ZSR3 168 aa4.65□□□□□ -1.67
CACNA1C-229ENST00000496818 TMED4Q7Z7H5 227 aa4.65□□□□□ -1.67
CACNA1C-229ENST00000496818 WDR86Q86TI4 376 aa4.65□□□□□ -1.67
CACNA1C-229ENST00000496818 NAA40Q86UY6 237 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms