RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 ZNF788Q6ZQV5 615 aa10.79□□□□□ -0.68
GARNL3-220ENST00000496711 OR10P1Q8NGE3 313 aa10.79□□□□□ -0.68
GARNL3-220ENST00000496711 MBD3L1Q8WWY6 194 aa10.79□□□□□ -0.68
GARNL3-220ENST00000496711 CLCC1Q96S66 551 aa10.79□□□□□ -0.68
GARNL3-220ENST00000496711 QTRT1Q9BXR0 403 aaKnown RBP10.79□□□□□ -0.68
GARNL3-220ENST00000496711 GAB2Q9UQC2 676 aa10.79□□□□□ -0.68
GARNL3-220ENST00000496711 TET2Q6N021 2002 aaPredicted RBP10.79□□□□□ -0.68
GARNL3-220ENST00000496711 ICE1Q9Y2F5 2266 aa10.79□□□□□ -0.68
GARNL3-220ENST00000496711 LOC102723971A0A1B0GUV8 181 aa10.78□□□□□ -0.68
GARNL3-220ENST00000496711 COLCA2A8K830 154 aa10.78□□□□□ -0.68
GARNL3-220ENST00000496711 IGHV3-7P01780 117 aa10.78□□□□□ -0.68
GARNL3-220ENST00000496711 GYPAP02724 150 aa10.78□□□□□ -0.68
GARNL3-220ENST00000496711 THBDP07204 575 aa10.78□□□□□ -0.68
GARNL3-220ENST00000496711 CD55P08174 381 aa10.78□□□□□ -0.68
GARNL3-220ENST00000496711 TNFRSF1AP19438 455 aa10.78□□□□□ -0.68
GARNL3-220ENST00000496711 ELLP55199 621 aaPredicted RBP10.78□□□□□ -0.68
GARNL3-220ENST00000496711 OR2B8PP59922 312 aa10.78□□□□□ -0.68
GARNL3-220ENST00000496711 BSPH1Q075Z2 132 aa10.78□□□□□ -0.68
GARNL3-220ENST00000496711 ADIPOQQ15848 244 aa10.78□□□□□ -0.68
GARNL3-220ENST00000496711 ZNF726P1Q15940 193 aa10.78□□□□□ -0.68
GARNL3-220ENST00000496711 KHDC3LQ587J8 217 aa10.78□□□□□ -0.68
GARNL3-220ENST00000496711 AVPI1Q5T686 147 aa10.78□□□□□ -0.68
GARNL3-220ENST00000496711 TCF23Q7RTU1 214 aa10.78□□□□□ -0.68
GARNL3-220ENST00000496711 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.78□□□□□ -0.68
GARNL3-220ENST00000496711 DEFB108BQ8NET1 73 aa10.78□□□□□ -0.68
GARNL3-220ENST00000496711 RCC1LQ96I51 464 aaKnown RBP10.78□□□□□ -0.68
GARNL3-220ENST00000496711 S1PR3Q99500 378 aa10.78□□□□□ -0.68
GARNL3-220ENST00000496711 CCL13Q99616 98 aa10.78□□□□□ -0.68
GARNL3-220ENST00000496711 NKX6-3A6NJ46 265 aa10.78□□□□□ -0.68
GARNL3-220ENST00000496711 ZNF729A6NN14 1252 aaPredicted RBP10.78□□□□□ -0.68
GARNL3-220ENST00000496711 LY86O95711 162 aa10.78□□□□□ -0.68
GARNL3-220ENST00000496711 OR4A8P0C604 315 aa10.78□□□□□ -0.68
GARNL3-220ENST00000496711 TMEM30BQ3MIR4 351 aa10.78□□□□□ -0.68
GARNL3-220ENST00000496711 PRR30Q53SZ7 412 aaPredicted RBP10.78□□□□□ -0.68
GARNL3-220ENST00000496711 SPINK9Q5DT21 86 aa10.78□□□□□ -0.68
GARNL3-220ENST00000496711 CENPVQ7Z7K6 275 aaPredicted RBP10.78□□□□□ -0.68
GARNL3-220ENST00000496711 FAM216BQ8N7L0 139 aa10.78□□□□□ -0.68
GARNL3-220ENST00000496711 DDB2Q92466 427 aa10.78□□□□□ -0.68
GARNL3-220ENST00000496711 LEAP2Q969E1 77 aa10.78□□□□□ -0.68
GARNL3-220ENST00000496711 SNRNP40Q96DI7 357 aaKnown RBP10.78□□□□□ -0.68
GARNL3-220ENST00000496711 SAA2-SAA4A0A096LPE2 208 aa10.77□□□□□ -0.69
GARNL3-220ENST00000496711 C17orf100A8MU93 164 aa10.77□□□□□ -0.69
GARNL3-220ENST00000496711 SAA2P0DJI9 122 aaPredicted RBP10.77□□□□□ -0.69
GARNL3-220ENST00000496711 NQO2P16083 231 aa10.77□□□□□ -0.69
GARNL3-220ENST00000496711 VWC2Q2TAL6 325 aa10.77□□□□□ -0.69
GARNL3-220ENST00000496711 CT45A1Q5HYN5 189 aa10.77□□□□□ -0.69
GARNL3-220ENST00000496711 LCN15Q6UWW0 184 aa10.77□□□□□ -0.69
GARNL3-220ENST00000496711 SSX9Q7RTT3 188 aa10.77□□□□□ -0.69
GARNL3-220ENST00000496711 SSX7Q7RTT5 188 aa10.77□□□□□ -0.69
GARNL3-220ENST00000496711 CYB561D1Q8N8Q1 229 aa10.77□□□□□ -0.69
GARNL3-220ENST00000496711 OR4A16Q8NH70 328 aa10.77□□□□□ -0.69
GARNL3-220ENST00000496711 OR4S2Q8NH73 311 aa10.77□□□□□ -0.69
GARNL3-220ENST00000496711 CT45A3Q8NHU0 189 aa10.77□□□□□ -0.69
GARNL3-220ENST00000496711 TUBA4BQ9H853 241 aa10.77□□□□□ -0.69
GARNL3-220ENST00000496711 IDI2-AS1Q9NZ38 188 aa10.77□□□□□ -0.69
GARNL3-220ENST00000496711 GNG13Q9P2W3 67 aa10.77□□□□□ -0.69
GARNL3-220ENST00000496711 PUS1Q9Y606 427 aaKnown RBP eCLIP10.77□□□□□ -0.69
GARNL3-220ENST00000496711 MAP1LC3B2A6NCE7 125 aa10.76□□□□□ -0.69
GARNL3-220ENST00000496711 IFNA17P01571 189 aa10.76□□□□□ -0.69
GARNL3-220ENST00000496711 CRYBA1P05813 215 aa10.76□□□□□ -0.69
GARNL3-220ENST00000496711 BCL2P10415 239 aa10.76□□□□□ -0.69
GARNL3-220ENST00000496711 FGF7P21781 194 aa10.76□□□□□ -0.69
GARNL3-220ENST00000496711 CEBPGP53567 150 aa10.76□□□□□ -0.69
GARNL3-220ENST00000496711 SPCS3P61009 180 aa10.76□□□□□ -0.69
GARNL3-220ENST00000496711 CCL8P80075 99 aa10.76□□□□□ -0.69
GARNL3-220ENST00000496711 RBPJQ06330 500 aa10.76□□□□□ -0.69
GARNL3-220ENST00000496711 UTF1Q5T230 341 aa10.76□□□□□ -0.69
GARNL3-220ENST00000496711 TGIF2LYQ8IUE0 185 aa10.76□□□□□ -0.69
GARNL3-220ENST00000496711 ZNF439Q8NDP4 499 aa10.76□□□□□ -0.69
GARNL3-220ENST00000496711 OR10G4Q8NGN3 311 aa10.76□□□□□ -0.69
GARNL3-220ENST00000496711 MAP1LC3BQ9GZQ8 125 aa10.76□□□□□ -0.69
GARNL3-220ENST00000496711 DCAF16Q9NXF7 216 aa10.76□□□□□ -0.69
GARNL3-220ENST00000496711 CISD1Q9NZ45 108 aaKnown RBP10.76□□□□□ -0.69
GARNL3-220ENST00000496711 YLPM1P49750 1951 aaKnown RBP10.76□□□□□ -0.69
GARNL3-220ENST00000496711 A0A1W2PPE3 182 aa10.76□□□□□ -0.69
GARNL3-220ENST00000496711 C15orf62A8K5M9 175 aa10.76□□□□□ -0.69
GARNL3-220ENST00000496711 ARG1P05089 322 aa10.76□□□□□ -0.69
GARNL3-220ENST00000496711 FOLR2P14207 255 aa10.76□□□□□ -0.69
GARNL3-220ENST00000496711 THBS3P49746 956 aa10.76□□□□□ -0.69
GARNL3-220ENST00000496711 FGF8P55075 233 aaPredicted RBP10.76□□□□□ -0.69
GARNL3-220ENST00000496711 GNB2P62879 340 aa10.76□□□□□ -0.69
GARNL3-220ENST00000496711 ADAM5Q6NVV9 412 aa10.76□□□□□ -0.69
GARNL3-220ENST00000496711 OR52E5Q8NH55 327 aa10.76□□□□□ -0.69
GARNL3-220ENST00000496711 CORO2AQ92828 525 aa10.76□□□□□ -0.69
GARNL3-220ENST00000496711 HIST1H2BAQ96A08 127 aa10.76□□□□□ -0.69
GARNL3-220ENST00000496711 LINC00574Q9H8X3 128 aa10.76□□□□□ -0.69
GARNL3-220ENST00000496711 TMEM140Q9NV12 185 aa10.76□□□□□ -0.69
GARNL3-220ENST00000496711 ZFP92A6NM28 416 aa10.75□□□□□ -0.69
GARNL3-220ENST00000496711 H3BQ15 152 aa10.75□□□□□ -0.69
GARNL3-220ENST00000496711 IFNA1P01562 189 aa10.75□□□□□ -0.69
GARNL3-220ENST00000496711 FBP1P09467 338 aa10.75□□□□□ -0.69
GARNL3-220ENST00000496711 DAOP14920 347 aa10.75□□□□□ -0.69
GARNL3-220ENST00000496711 RPS16P62249 146 aaKnown RBP10.75□□□□□ -0.69
GARNL3-220ENST00000496711 RELBQ01201 579 aa10.75□□□□□ -0.69
GARNL3-220ENST00000496711 TFF3Q07654 80 aa10.75□□□□□ -0.69
GARNL3-220ENST00000496711 PDLIM3Q53GG5 364 aaPredicted RBP10.75□□□□□ -0.69
GARNL3-220ENST00000496711 ACSM6Q6P461 480 aa10.75□□□□□ -0.69
GARNL3-220ENST00000496711 C1orf229Q6ZS94 237 aaPredicted RBP10.75□□□□□ -0.69
GARNL3-220ENST00000496711 VKORC1L1Q8N0U8 176 aa10.75□□□□□ -0.69
GARNL3-220ENST00000496711 ADTRPQ96IZ2 230 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms