RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 THOC6Q86W42 341 aaKnown RBP3.21□□□□□ -1.9
SF3B1-212ENST00000496458 GPR32P1Q8NGA4 272 aa3.21□□□□□ -1.9
SF3B1-212ENST00000496458 OR13D1Q8NGV5 346 aa3.21□□□□□ -1.9
SF3B1-212ENST00000496458 C16orf78Q8WTQ4 265 aa3.21□□□□□ -1.9
SF3B1-212ENST00000496458 CASTOR1Q8WTX7 329 aa3.21□□□□□ -1.9
SF3B1-212ENST00000496458 CYGBQ8WWM9 190 aa3.21□□□□□ -1.9
SF3B1-212ENST00000496458 MRPS24Q96EL2 167 aaKnown RBP3.21□□□□□ -1.9
SF3B1-212ENST00000496458 AURKBQ96GD4 344 aaPredicted RBP3.21□□□□□ -1.9
SF3B1-212ENST00000496458 RNF157Q96PX1 679 aa3.21□□□□□ -1.9
SF3B1-212ENST00000496458 CMSS1Q9BQ75 279 aaKnown RBP3.21□□□□□ -1.9
SF3B1-212ENST00000496458 MARVELD1Q9BSK0 173 aa3.21□□□□□ -1.9
SF3B1-212ENST00000496458 SRMSQ9H3Y6 488 aa3.21□□□□□ -1.9
SF3B1-212ENST00000496458 CALML5Q9NZT1 146 aa3.21□□□□□ -1.9
SF3B1-212ENST00000496458 NDRG2Q9UN36 371 aaKnown RBP3.21□□□□□ -1.9
SF3B1-212ENST00000496458 COL6A3P12111 3177 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 PRRC2BQ5JSZ5 2229 aaKnown RBP3.2□□□□□ -1.9
SF3B1-212ENST00000496458 IGHV3OR16-9A0A0B4J2B5 98 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 DAPL1A0PJW8 107 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 M0R233 179 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 TP53I11O14683 189 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 MPC2O95563 127 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 IGKV1D-16P01601 117 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 HLA-DQB1P01920 261 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 APOC3P02656 99 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 EIF4EP06730 217 aaKnown RBP3.2□□□□□ -1.9
SF3B1-212ENST00000496458 NMBP08949 121 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 MRPL3P09001 348 aaKnown RBP3.2□□□□□ -1.9
SF3B1-212ENST00000496458 GKN3PP0CG01 181 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 UCHL3P15374 230 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 CRISP2P16562 243 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 TTPAP49638 278 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 ARPP19P56211 112 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 TAS2R19P59542 299 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 RPS20P60866 119 aaKnown RBP3.2□□□□□ -1.9
SF3B1-212ENST00000496458 RPS21P63220 83 aaKnown RBP3.2□□□□□ -1.9
SF3B1-212ENST00000496458 PRR3P79522 188 aaKnown RBP3.2□□□□□ -1.9
SF3B1-212ENST00000496458 TFAMQ00059 246 aaKnown RBP3.2□□□□□ -1.9
SF3B1-212ENST00000496458 SLC9A3R2Q15599 337 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 PRSS8Q16651 343 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 CLEC12BQ2HXU8 276 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 CEACAM16Q2WEN9 425 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 C10orf91Q5T1B1 145 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 STEAP4Q687X5 459 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 TEX43Q6ZNM6 134 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 LYG2Q86SG7 212 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 NAA40Q86UY6 237 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 PDZD9Q8IXQ8 264 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 GATD1Q8NB37 220 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 C11orf72Q8NBR9 251 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 OR2M7Q8NG81 312 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 OR10AD1Q8NGE0 317 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 OR6N1Q8NGY5 312 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 OR9G1Q8NH87 305 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 OR5K1Q8NHB7 308 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 C1orf54Q8WWF1 131 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 LCN9Q8WX39 176 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 MALSU1Q96EH3 234 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 SMIM12Q96EX1 92 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 PGLYRP3Q96LB9 341 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 KLF6Q99612 283 aaPredicted RBP3.2□□□□□ -1.9
SF3B1-212ENST00000496458 HDHD3Q9BSH5 251 aaPredicted RBP3.2□□□□□ -1.9
SF3B1-212ENST00000496458 DDA1Q9BW61 102 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 ULBP1Q9BZM6 244 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 PCBD2Q9H0N5 130 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 MAP1LC3AQ9H492 121 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 FAM206AQ9NX38 181 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 DHCR7Q9UBM7 475 aaKnown RBP3.2□□□□□ -1.9
SF3B1-212ENST00000496458 MTFP1Q9UDX5 166 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 TBX21Q9UL17 535 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 CARHSP1Q9Y2V2 147 aaKnown RBP3.2□□□□□ -1.9
SF3B1-212ENST00000496458 TPRKBQ9Y3C4 175 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 Q9Y3F1 56 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 SNX10Q9Y5X0 201 aa3.2□□□□□ -1.9
SF3B1-212ENST00000496458 LRRC37A2A6NM11 1700 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 A0A1W2PP18 115 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 TMEM72A0PK05 275 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 C7orf66A4D0T2 115 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 TRAPPC13A5PLN9 417 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 A8MWP6 167 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 J3QT63 122 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 M0R143 59 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 BHLHE40O14503 412 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 SOX14O95416 240 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 C8GP07360 202 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 CSF3P09919 207 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 TSPAN19P0C672 248 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 CHTF8P0CG12 524 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 ZNF286BP0CG31 522 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 ERGP11308 486 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 SCGB1A1P11684 91 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 TCN2P20062 427 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 S100A2P29034 98 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 SLC6A1P30531 599 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 TSPOP30536 169 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 SSTR5P35346 364 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 CD200P41217 278 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 GABRA4P48169 554 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 NUDT2P50583 147 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 CDKN2DP55273 166 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 KLF3P57682 345 aaPredicted RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms