RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 LFNGQ8NES3 379 aa12.19□□□□□ -0.46
HDAC4-213ENST00000496347 SLC25A38Q96DW6 304 aa12.19□□□□□ -0.46
HDAC4-213ENST00000496347 OR5B12Q96R08 314 aa12.19□□□□□ -0.46
HDAC4-213ENST00000496347 CLCC1Q96S66 551 aa12.19□□□□□ -0.46
HDAC4-213ENST00000496347 VCX3AQ9NNX9 186 aa12.19□□□□□ -0.46
HDAC4-213ENST00000496347 OR2W1Q9Y3N9 320 aa12.19□□□□□ -0.46
HDAC4-213ENST00000496347 DNAH9Q9NYC9 4486 aa12.19□□□□□ -0.46
HDAC4-213ENST00000496347 STAB2Q8WWQ8 2551 aa12.18□□□□□ -0.46
HDAC4-213ENST00000496347 CREBL2O60519 120 aaPredicted RBP12.18□□□□□ -0.46
HDAC4-213ENST00000496347 CRYGBP07316 175 aa12.18□□□□□ -0.46
HDAC4-213ENST00000496347 TPPP2P59282 170 aa12.18□□□□□ -0.46
HDAC4-213ENST00000496347 SSBP2P81877 361 aaPredicted RBP12.18□□□□□ -0.46
HDAC4-213ENST00000496347 VMA21Q3ZAQ7 101 aa12.18□□□□□ -0.46
HDAC4-213ENST00000496347 CNIH2Q6PI25 160 aa12.18□□□□□ -0.46
HDAC4-213ENST00000496347 OVCH2Q7RTZ1 564 aa12.18□□□□□ -0.46
HDAC4-213ENST00000496347 CROCCP3Q8IVE0 287 aa12.18□□□□□ -0.46
HDAC4-213ENST00000496347 OSR1Q8TAX0 266 aaPredicted RBP12.18□□□□□ -0.46
HDAC4-213ENST00000496347 TMEM68Q96MH6 324 aa12.18□□□□□ -0.46
HDAC4-213ENST00000496347 ST6GALNAC5Q9BVH7 336 aa12.18□□□□□ -0.46
HDAC4-213ENST00000496347 ANXA10Q9UJ72 324 aa12.18□□□□□ -0.46
HDAC4-213ENST00000496347 LINC01619G3V211 115 aa12.17□□□□□ -0.46
HDAC4-213ENST00000496347 ARPC1BO15143 372 aaKnown RBP12.17□□□□□ -0.46
HDAC4-213ENST00000496347 SSX5O60225 188 aa12.17□□□□□ -0.46
HDAC4-213ENST00000496347 CNIH1O95406 144 aa12.17□□□□□ -0.46
HDAC4-213ENST00000496347 CRYZL1O95825 349 aa12.17□□□□□ -0.46
HDAC4-213ENST00000496347 UBE2KP61086 200 aa12.17□□□□□ -0.46
HDAC4-213ENST00000496347 IDNKQ5T6J7 187 aa12.17□□□□□ -0.46
HDAC4-213ENST00000496347 POC5Q8NA72 575 aa12.17□□□□□ -0.46
HDAC4-213ENST00000496347 BVESQ8NE79 360 aa12.17□□□□□ -0.46
HDAC4-213ENST00000496347 RNF167Q9H6Y7 350 aa12.17□□□□□ -0.46
HDAC4-213ENST00000496347 SCOCQ9UIL1 159 aa12.17□□□□□ -0.46
HDAC4-213ENST00000496347 MRPS7Q9Y2R9 242 aaKnown RBP12.17□□□□□ -0.46
HDAC4-213ENST00000496347 TENM3Q9P273 2699 aa12.17□□□□□ -0.46
HDAC4-213ENST00000496347 LINC00473A8K010 186 aa12.16□□□□□ -0.46
HDAC4-213ENST00000496347 TNFAIP8O95379 198 aa12.16□□□□□ -0.46
HDAC4-213ENST00000496347 BRI3O95415 125 aa12.16□□□□□ -0.46
HDAC4-213ENST00000496347 HLA-DQB1P01920 261 aa12.16□□□□□ -0.46
HDAC4-213ENST00000496347 TRGV3P03979 118 aa12.16□□□□□ -0.46
HDAC4-213ENST00000496347 CLEC2LP0C7M8 214 aa12.16□□□□□ -0.46
HDAC4-213ENST00000496347 NFYAP23511 347 aaPredicted RBP12.16□□□□□ -0.46
HDAC4-213ENST00000496347 DEFB121Q5J5C9 76 aa12.16□□□□□ -0.46
HDAC4-213ENST00000496347 KCTD9Q7L273 389 aa12.16□□□□□ -0.46
HDAC4-213ENST00000496347 TEX45Q8NA69 505 aa12.16□□□□□ -0.46
HDAC4-213ENST00000496347 CASTOR1Q8WTX7 329 aa12.16□□□□□ -0.46
HDAC4-213ENST00000496347 B9D2Q9BPU9 175 aa12.16□□□□□ -0.46
HDAC4-213ENST00000496347 ALX4Q9H161 411 aaPredicted RBP12.16□□□□□ -0.46
HDAC4-213ENST00000496347 RBMX2Q9Y388 322 aaKnown RBP12.16□□□□□ -0.46
HDAC4-213ENST00000496347 A0A087WXM4 84 aa12.15□□□□□ -0.46
HDAC4-213ENST00000496347 OVOL1O14753 267 aa12.15□□□□□ -0.46
HDAC4-213ENST00000496347 TUSC2O75896 110 aa12.15□□□□□ -0.46
HDAC4-213ENST00000496347 ARPC4P59998 168 aa12.15□□□□□ -0.46
HDAC4-213ENST00000496347 CD69Q07108 199 aa12.15□□□□□ -0.46
HDAC4-213ENST00000496347 PJVKQ0ZLH3 352 aa12.15□□□□□ -0.46
HDAC4-213ENST00000496347 ZNF429Q86V71 674 aa12.15□□□□□ -0.46
HDAC4-213ENST00000496347 OR5H6Q8NGV6 325 aa12.15□□□□□ -0.46
HDAC4-213ENST00000496347 HSD17B10Q99714 261 aaKnown RBP12.15□□□□□ -0.46
HDAC4-213ENST00000496347 SPATA2Q9UM82 520 aa12.15□□□□□ -0.46
HDAC4-213ENST00000496347 ZNF256Q9Y2P7 627 aaPredicted RBP12.15□□□□□ -0.46
HDAC4-213ENST00000496347 PRELID3BQ9Y3B1 194 aa12.15□□□□□ -0.46
HDAC4-213ENST00000496347 IGHV4OR15-8A0A075B7B6 117 aa12.14□□□□□ -0.47
HDAC4-213ENST00000496347 A0A087WW49 117 aa12.14□□□□□ -0.47
HDAC4-213ENST00000496347 A0A0G2JLM5 398 aa12.14□□□□□ -0.47
HDAC4-213ENST00000496347 SRRM4A7MD48 611 aaKnown RBP12.14□□□□□ -0.47
HDAC4-213ENST00000496347 AIREO43918 545 aa12.14□□□□□ -0.47
HDAC4-213ENST00000496347 IGLV2-14P01704 120 aa12.14□□□□□ -0.47
HDAC4-213ENST00000496347 HSPB1P04792 205 aaKnown RBP12.14□□□□□ -0.47
HDAC4-213ENST00000496347 ECI1P42126 302 aa12.14□□□□□ -0.47
HDAC4-213ENST00000496347 MSMO1Q15800 293 aa12.14□□□□□ -0.47
HDAC4-213ENST00000496347 PRSS8Q16651 343 aa12.14□□□□□ -0.47
HDAC4-213ENST00000496347 BEST4Q8NFU0 473 aa12.14□□□□□ -0.47
HDAC4-213ENST00000496347 TSPAN14Q8NG11 270 aa12.14□□□□□ -0.47
HDAC4-213ENST00000496347 OR4S2Q8NH73 311 aa12.14□□□□□ -0.47
HDAC4-213ENST00000496347 DCUN1D4Q92564 292 aa12.14□□□□□ -0.47
HDAC4-213ENST00000496347 MS4A10Q96PG2 267 aa12.14□□□□□ -0.47
HDAC4-213ENST00000496347 DIABLOQ9NR28 239 aa12.14□□□□□ -0.47
HDAC4-213ENST00000496347 TRAV18A0A075B6X5 111 aa12.13□□□□□ -0.47
HDAC4-213ENST00000496347 IGKV1D-13A0A0B4J2D9 117 aa12.13□□□□□ -0.47
HDAC4-213ENST00000496347 C13orf42A0A1B0GVH6 325 aa12.13□□□□□ -0.47
HDAC4-213ENST00000496347 FCGR3BO75015 233 aa12.13□□□□□ -0.47
HDAC4-213ENST00000496347 IGHV3-11P01762 117 aa12.13□□□□□ -0.47
HDAC4-213ENST00000496347 SAA1P0DJI8 122 aaPredicted RBP12.13□□□□□ -0.47
HDAC4-213ENST00000496347 IGKV1-13P0DP09 117 aa12.13□□□□□ -0.47
HDAC4-213ENST00000496347 ZP3P21754 424 aa12.13□□□□□ -0.47
HDAC4-213ENST00000496347 AADACP22760 399 aa12.13□□□□□ -0.47
HDAC4-213ENST00000496347 CBX5P45973 191 aa12.13□□□□□ -0.47
HDAC4-213ENST00000496347 SLURP1P55000 103 aa12.13□□□□□ -0.47
HDAC4-213ENST00000496347 CDK10Q15131 360 aa12.13□□□□□ -0.47
HDAC4-213ENST00000496347 MRGPRG-AS1Q2M3A8 158 aa12.13□□□□□ -0.47
HDAC4-213ENST00000496347 HOGA1Q86XE5 327 aa12.13□□□□□ -0.47
HDAC4-213ENST00000496347 DLX4Q92988 240 aaPredicted RBP12.13□□□□□ -0.47
HDAC4-213ENST00000496347 RHOVQ96L33 236 aa12.13□□□□□ -0.47
HDAC4-213ENST00000496347 AUNIPQ9H7T9 357 aa12.13□□□□□ -0.47
HDAC4-213ENST00000496347 ZNF355PQ9NSJ1 428 aa12.13□□□□□ -0.47
HDAC4-213ENST00000496347 SAP30O75446 220 aa12.12□□□□□ -0.47
HDAC4-213ENST00000496347 EIF4EBP1Q13541 118 aaPredicted RBP12.12□□□□□ -0.47
HDAC4-213ENST00000496347 UBE2NLQ5JXB2 153 aa12.12□□□□□ -0.47
HDAC4-213ENST00000496347 ACSM6Q6P461 480 aa12.12□□□□□ -0.47
HDAC4-213ENST00000496347 ZNF66Q6ZN08 573 aa12.12□□□□□ -0.47
HDAC4-213ENST00000496347 IDO2Q6ZQW0 420 aa12.12□□□□□ -0.47
HDAC4-213ENST00000496347 MMD2Q8IY49 270 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms