RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 OR2B11Q5JQS5 317 aa12.12□□□□□ -0.47
GAPDH-210ENST00000496049 BRD3OSQ6XYD6 125 aa12.12□□□□□ -0.47
GAPDH-210ENST00000496049 Q6ZNX1 250 aa12.12□□□□□ -0.47
GAPDH-210ENST00000496049 LHFPL4Q7Z7J7 247 aa12.12□□□□□ -0.47
GAPDH-210ENST00000496049 MOB3BQ86TA1 216 aa12.12□□□□□ -0.47
GAPDH-210ENST00000496049 PDPNQ86YL7 162 aa12.12□□□□□ -0.47
GAPDH-210ENST00000496049 SPAG16Q8N0X2 631 aa12.12□□□□□ -0.47
GAPDH-210ENST00000496049 LGI3Q8N145 548 aa12.12□□□□□ -0.47
GAPDH-210ENST00000496049 GPHA2Q96T91 129 aa12.12□□□□□ -0.47
GAPDH-210ENST00000496049 NABP2Q9BQ15 211 aa12.12□□□□□ -0.47
GAPDH-210ENST00000496049 MS4A7Q9GZW8 240 aaPredicted RBP12.12□□□□□ -0.47
GAPDH-210ENST00000496049 TMEM222Q9H0R3 208 aa12.12□□□□□ -0.47
GAPDH-210ENST00000496049 SLC35D1Q9NTN3 355 aa12.12□□□□□ -0.47
GAPDH-210ENST00000496049 WASHC3Q9Y3C0 194 aa12.12□□□□□ -0.47
GAPDH-210ENST00000496049 ALG5Q9Y673 324 aa12.12□□□□□ -0.47
GAPDH-210ENST00000496049 C7orf66A4D0T2 115 aa12.11□□□□□ -0.47
GAPDH-210ENST00000496049 RBFOX2O43251 390 aaKnown RBP eCLIP12.11□□□□□ -0.47
GAPDH-210ENST00000496049 FCGR3BO75015 233 aa12.11□□□□□ -0.47
GAPDH-210ENST00000496049 FBP1P09467 338 aa12.11□□□□□ -0.47
GAPDH-210ENST00000496049 FAM157CP0CG43 387 aa12.11□□□□□ -0.47
GAPDH-210ENST00000496049 CT45A6P0DMU7 189 aa12.11□□□□□ -0.47
GAPDH-210ENST00000496049 CT45A5P0DMU8 189 aa12.11□□□□□ -0.47
GAPDH-210ENST00000496049 CT45A7P0DMV0 189 aa12.11□□□□□ -0.47
GAPDH-210ENST00000496049 BRS3P32247 399 aa12.11□□□□□ -0.47
GAPDH-210ENST00000496049 SUPT4H1P63272 117 aaKnown RBP12.11□□□□□ -0.47
GAPDH-210ENST00000496049 RUSC1-AS1Q66K80 236 aa12.11□□□□□ -0.47
GAPDH-210ENST00000496049 ZNF695Q8IW36 515 aa12.11□□□□□ -0.47
GAPDH-210ENST00000496049 OR52B4Q8NGK2 314 aa12.11□□□□□ -0.47
GAPDH-210ENST00000496049 TP53RKQ96S44 253 aa12.11□□□□□ -0.47
GAPDH-210ENST00000496049 OR51J1Q9H342 316 aa12.11□□□□□ -0.47
GAPDH-210ENST00000496049 A0A0A6YYJ9 748 aa12.1□□□□□ -0.47
GAPDH-210ENST00000496049 A0A0B4J2A0 478 aa12.1□□□□□ -0.47
GAPDH-210ENST00000496049 A0A1W2PPI3 338 aa12.1□□□□□ -0.47
GAPDH-210ENST00000496049 LINC00473A8K010 186 aa12.1□□□□□ -0.47
GAPDH-210ENST00000496049 H0YJW9 148 aa12.1□□□□□ -0.47
GAPDH-210ENST00000496049 AVPP01185 164 aa12.1□□□□□ -0.47
GAPDH-210ENST00000496049 UCP1P25874 307 aa12.1□□□□□ -0.47
GAPDH-210ENST00000496049 SRP14P37108 136 aaKnown RBP12.1□□□□□ -0.47
GAPDH-210ENST00000496049 ERVK-16P61578 105 aa12.1□□□□□ -0.47
GAPDH-210ENST00000496049 RPL30P62888 115 aaKnown RBP12.1□□□□□ -0.47
GAPDH-210ENST00000496049 DIAPH2-AS1Q14236 149 aa12.1□□□□□ -0.47
GAPDH-210ENST00000496049 SP6Q3SY56 376 aa12.1□□□□□ -0.47
GAPDH-210ENST00000496049 KLF17Q5JT82 389 aaPredicted RBP12.1□□□□□ -0.47
GAPDH-210ENST00000496049 LIAT1Q6ZQX7 453 aa12.1□□□□□ -0.47
GAPDH-210ENST00000496049 PIP4P2Q8N4L2 257 aa12.1□□□□□ -0.47
GAPDH-210ENST00000496049 C12orf45Q8N5I9 185 aaPredicted RBP12.1□□□□□ -0.47
GAPDH-210ENST00000496049 ZNF383Q8NA42 475 aa12.1□□□□□ -0.47
GAPDH-210ENST00000496049 OR5AN1Q8NGI8 311 aa12.1□□□□□ -0.47
GAPDH-210ENST00000496049 RNASE11Q8TAA1 199 aaKnown RBP12.1□□□□□ -0.47
GAPDH-210ENST00000496049 MITD1Q8WV92 249 aa12.1□□□□□ -0.47
GAPDH-210ENST00000496049 DDB2Q92466 427 aa12.1□□□□□ -0.47
GAPDH-210ENST00000496049 IL22RA2Q969J5 263 aa12.1□□□□□ -0.47
GAPDH-210ENST00000496049 AIFM2Q9BRQ8 373 aa12.1□□□□□ -0.47
GAPDH-210ENST00000496049 TMEM160Q9NX00 188 aa12.1□□□□□ -0.47
GAPDH-210ENST00000496049 COMMD9Q9P000 198 aa12.1□□□□□ -0.47
GAPDH-210ENST00000496049 SHPKQ9UHJ6 478 aa12.1□□□□□ -0.47
GAPDH-210ENST00000496049 A0A0B4J293 547 aa12.09□□□□□ -0.47
GAPDH-210ENST00000496049 DUXBA0A1W2PPF3 345 aa12.09□□□□□ -0.47
GAPDH-210ENST00000496049 TIMM23O14925 209 aa12.09□□□□□ -0.47
GAPDH-210ENST00000496049 PROP1O75360 226 aa12.09□□□□□ -0.47
GAPDH-210ENST00000496049 HPRT1P00492 218 aa12.09□□□□□ -0.47
GAPDH-210ENST00000496049 FSHBP01225 129 aa12.09□□□□□ -0.47
GAPDH-210ENST00000496049 TMEM187Q14656 261 aa12.09□□□□□ -0.47
GAPDH-210ENST00000496049 PDLIM3Q53GG5 364 aaPredicted RBP12.09□□□□□ -0.47
GAPDH-210ENST00000496049 FAM120AOSQ5T036 256 aa12.09□□□□□ -0.47
GAPDH-210ENST00000496049 C1orf229Q6ZS94 237 aaPredicted RBP12.09□□□□□ -0.47
GAPDH-210ENST00000496049 UXS1Q8NBZ7 420 aa12.09□□□□□ -0.47
GAPDH-210ENST00000496049 RBPMSQ93062 196 aaKnown RBP12.09□□□□□ -0.47
GAPDH-210ENST00000496049 MED28Q9H204 178 aa12.09□□□□□ -0.47
GAPDH-210ENST00000496049 PLEKHA2Q9HB19 425 aa12.09□□□□□ -0.47
GAPDH-210ENST00000496049 hCG_2014768A0A024R1R8 64 aa12.08□□□□□ -0.48
GAPDH-210ENST00000496049 A0A0U1RQK1 487 aa12.08□□□□□ -0.48
GAPDH-210ENST00000496049 CRYZL1O95825 349 aa12.08□□□□□ -0.48
GAPDH-210ENST00000496049 HRASP01112 189 aa12.08□□□□□ -0.48
GAPDH-210ENST00000496049 IFNA21P01568 189 aa12.08□□□□□ -0.48
GAPDH-210ENST00000496049 CD1BP29016 333 aa12.08□□□□□ -0.48
GAPDH-210ENST00000496049 LPAR6P43657 344 aa12.08□□□□□ -0.48
GAPDH-210ENST00000496049 AKR1C2P52895 323 aa12.08□□□□□ -0.48
GAPDH-210ENST00000496049 ANKRD55Q3KP44 614 aa12.08□□□□□ -0.48
GAPDH-210ENST00000496049 TMEM268Q5VZI3 342 aa12.08□□□□□ -0.48
GAPDH-210ENST00000496049 HIST2H2BDQ6DRA6 164 aa12.08□□□□□ -0.48
GAPDH-210ENST00000496049 LIN54Q6MZP7 749 aa12.08□□□□□ -0.48
GAPDH-210ENST00000496049 C9orf139Q6ZV77 190 aa12.08□□□□□ -0.48
GAPDH-210ENST00000496049 OR4C13Q8NGP0 309 aa12.08□□□□□ -0.48
GAPDH-210ENST00000496049 OSR1Q8TAX0 266 aaPredicted RBP12.08□□□□□ -0.48
GAPDH-210ENST00000496049 GLYATL2Q8WU03 294 aa12.08□□□□□ -0.48
GAPDH-210ENST00000496049 FLYWCH2Q96CP2 140 aaKnown RBP12.08□□□□□ -0.48
GAPDH-210ENST00000496049 TMEM56Q96MV1 263 aa12.08□□□□□ -0.48
GAPDH-210ENST00000496049 CDC42EP3Q9UKI2 254 aa12.08□□□□□ -0.48
GAPDH-210ENST00000496049 TMEM56-RWDD3S4R434 201 aa12.08□□□□□ -0.48
GAPDH-210ENST00000496049 SHOXO15266 292 aa12.07□□□□□ -0.48
GAPDH-210ENST00000496049 RAMP3O60896 148 aa12.07□□□□□ -0.48
GAPDH-210ENST00000496049 CDS2O95674 445 aa12.07□□□□□ -0.48
GAPDH-210ENST00000496049 FAM106CPP0CH98 169 aa12.07□□□□□ -0.48
GAPDH-210ENST00000496049 LDLRAD2Q5SZI1 272 aa12.07□□□□□ -0.48
GAPDH-210ENST00000496049 LRTM2Q8N967 370 aa12.07□□□□□ -0.48
GAPDH-210ENST00000496049 RRNAD1Q96FB5 475 aaKnown RBP12.07□□□□□ -0.48
GAPDH-210ENST00000496049 HARBI1Q96MB7 349 aa12.07□□□□□ -0.48
GAPDH-210ENST00000496049 IGHV3-72A0A0B4J1Y9 119 aa12.06□□□□□ -0.48
GAPDH-210ENST00000496049 BTBD17A6NE02 478 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms