RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071	AGFG2	O95081	481 aa		11.24	□□□□□ -0.61
SUPT20H-222	ENST00000495071	IGHV3-13	P01766	116 aa		11.24	□□□□□ -0.61
SUPT20H-222	ENST00000495071	IGHV3-7	P01780	117 aa		11.24	□□□□□ -0.61
SUPT20H-222	ENST00000495071	HNF1A	P20823	631 aa		11.24	□□□□□ -0.61
SUPT20H-222	ENST00000495071	GABRA6	Q16445	453 aa		11.24	□□□□□ -0.61
SUPT20H-222	ENST00000495071	OR5R1	Q8NH85	324 aa		11.24	□□□□□ -0.61
SUPT20H-222	ENST00000495071	R3HDM4	Q96D70	268 aa		11.24	□□□□□ -0.61
SUPT20H-222	ENST00000495071	FER1L6-AS2	Q96M78	137 aa		11.24	□□□□□ -0.61
SUPT20H-222	ENST00000495071	WFIKKN1	Q96NZ8	548 aa		11.24	□□□□□ -0.61
SUPT20H-222	ENST00000495071	MSL2	Q9HCI7	577 aa		11.24	□□□□□ -0.61
SUPT20H-222	ENST00000495071	FRY	Q5TBA9	3013 aa		11.24	□□□□□ -0.61
SUPT20H-222	ENST00000495071	TMEM210	A6NLX4	147 aa		11.24	□□□□□ -0.61
SUPT20H-222	ENST00000495071	NDUFB4	O95168	129 aa		11.24	□□□□□ -0.61
SUPT20H-222	ENST00000495071	GZMB	P10144	247 aa		11.24	□□□□□ -0.61
SUPT20H-222	ENST00000495071	GPR12	P47775	334 aa		11.24	□□□□□ -0.61
SUPT20H-222	ENST00000495071	PEAR1	Q5VY43	1037 aa	Predicted RBP	11.24	□□□□□ -0.61
SUPT20H-222	ENST00000495071	OR4A16	Q8NH70	328 aa		11.24	□□□□□ -0.61
SUPT20H-222	ENST00000495071	C5orf30	Q96GV9	206 aa		11.24	□□□□□ -0.61
SUPT20H-222	ENST00000495071	RNF224	P0DH78	156 aa		11.24	□□□□□ -0.61
SUPT20H-222	ENST00000495071	CD1B	P29016	333 aa		11.24	□□□□□ -0.61
SUPT20H-222	ENST00000495071	NUBP1	P53384	320 aa		11.24	□□□□□ -0.61
SUPT20H-222	ENST00000495071	ATP1A1-AS1	Q5TC04	95 aa		11.24	□□□□□ -0.61
SUPT20H-222	ENST00000495071	SLC35E4	Q6ICL7	350 aa		11.24	□□□□□ -0.61
SUPT20H-222	ENST00000495071	CENPV	Q7Z7K6	275 aa	Predicted RBP	11.24	□□□□□ -0.61
SUPT20H-222	ENST00000495071	QTRT1	Q9BXR0	403 aa	Known RBP	11.24	□□□□□ -0.61
SUPT20H-222	ENST00000495071	TNRC6B	Q9UPQ9	1833 aa	Known RBP	11.23	□□□□□ -0.61
SUPT20H-222	ENST00000495071	ATP5G3	P48201	142 aa		11.23	□□□□□ -0.61
SUPT20H-222	ENST00000495071	OR13A1	Q8NGR1	328 aa		11.23	□□□□□ -0.61
SUPT20H-222	ENST00000495071	TMEM170A	Q8WVE7	144 aa		11.23	□□□□□ -0.61
SUPT20H-222	ENST00000495071	ACY3	Q96HD9	319 aa		11.23	□□□□□ -0.61
SUPT20H-222	ENST00000495071	CDX2	Q99626	313 aa	Predicted RBP	11.23	□□□□□ -0.61
SUPT20H-222	ENST00000495071	TMEM204	Q9BSN7	226 aa		11.23	□□□□□ -0.61
SUPT20H-222	ENST00000495071	DCTN5	Q9BTE1	182 aa		11.23	□□□□□ -0.61
SUPT20H-222	ENST00000495071	SPRR3	Q9UBC9	169 aa		11.23	□□□□□ -0.61
SUPT20H-222	ENST00000495071	PRR14L	Q5THK1	2151 aa		11.23	□□□□□ -0.61
SUPT20H-222	ENST00000495071	TMEM265	A0A087WTH1	108 aa		11.23	□□□□□ -0.61
SUPT20H-222	ENST00000495071	LINC00473	A8K010	186 aa		11.23	□□□□□ -0.61
SUPT20H-222	ENST00000495071	IQCF6	A8MYZ5	107 aa		11.23	□□□□□ -0.61
SUPT20H-222	ENST00000495071	TDGF1	P13385	188 aa		11.23	□□□□□ -0.61
SUPT20H-222	ENST00000495071	IGHV1-2	P23083	117 aa		11.23	□□□□□ -0.61
SUPT20H-222	ENST00000495071	ZNF766	Q5HY98	468 aa		11.23	□□□□□ -0.61
SUPT20H-222	ENST00000495071	DNLZ	Q5SXM8	178 aa		11.23	□□□□□ -0.61
SUPT20H-222	ENST00000495071	COQ2	Q96H96	371 aa		11.23	□□□□□ -0.61
SUPT20H-222	ENST00000495071	PYGO2	Q9BRQ0	406 aa		11.23	□□□□□ -0.61
SUPT20H-222	ENST00000495071		J3QW42	95 aa		11.23	□□□□□ -0.61
SUPT20H-222	ENST00000495071	SRP14	P37108	136 aa	Known RBP	11.23	□□□□□ -0.61
SUPT20H-222	ENST00000495071	TRIB1	Q96RU8	372 aa		11.23	□□□□□ -0.61
SUPT20H-222	ENST00000495071	HSD17B10	Q99714	261 aa	Known RBP	11.23	□□□□□ -0.61
SUPT20H-222	ENST00000495071	TRAPPC1	Q9Y5R8	145 aa		11.23	□□□□□ -0.61
SUPT20H-222	ENST00000495071	DMD	P11532	3685 aa		11.22	□□□□□ -0.61
SUPT20H-222	ENST00000495071	SOX15	O60248	233 aa		11.22	□□□□□ -0.61
SUPT20H-222	ENST00000495071	SCGB1D1	O95968	90 aa		11.22	□□□□□ -0.61
SUPT20H-222	ENST00000495071	ERVK-16	P61578	105 aa		11.22	□□□□□ -0.61
SUPT20H-222	ENST00000495071	SMIM21	Q3B7S5	101 aa		11.22	□□□□□ -0.61
SUPT20H-222	ENST00000495071	OR6C3	Q9NZP0	311 aa		11.22	□□□□□ -0.61
SUPT20H-222	ENST00000495071	METRN	Q9UJH8	293 aa		11.22	□□□□□ -0.61
SUPT20H-222	ENST00000495071	MDFIC2	A0A1B0GVS7	189 aa		11.22	□□□□□ -0.61
SUPT20H-222	ENST00000495071	PGPEP1L	A6NFU8	196 aa		11.22	□□□□□ -0.61
SUPT20H-222	ENST00000495071	VENTX	O95231	258 aa		11.22	□□□□□ -0.61
SUPT20H-222	ENST00000495071	GCH1	P30793	250 aa		11.22	□□□□□ -0.61
SUPT20H-222	ENST00000495071	ACP7	Q6ZNF0	438 aa		11.22	□□□□□ -0.61
SUPT20H-222	ENST00000495071	CISD2	Q8N5K1	135 aa	Known RBP	11.22	□□□□□ -0.61
SUPT20H-222	ENST00000495071	GMPPA	Q96IJ6	420 aa	Predicted RBP	11.22	□□□□□ -0.61
SUPT20H-222	ENST00000495071	CXXC4	Q9H2H0	198 aa		11.22	□□□□□ -0.61
SUPT20H-222	ENST00000495071	PCSK5	Q92824	1860 aa		11.22	□□□□□ -0.61
SUPT20H-222	ENST00000495071	PMS2P5	A8MQ11	134 aa		11.22	□□□□□ -0.61
SUPT20H-222	ENST00000495071	PDE6D	O43924	150 aa		11.22	□□□□□ -0.61
SUPT20H-222	ENST00000495071	TNFSF15	O95150	251 aa		11.22	□□□□□ -0.61
SUPT20H-222	ENST00000495071	RPP30	P78346	268 aa	Known RBP	11.22	□□□□□ -0.61
SUPT20H-222	ENST00000495071	RNFT1	Q5M7Z0	435 aa		11.22	□□□□□ -0.61
SUPT20H-222	ENST00000495071	VKORC1L1	Q8N0U8	176 aa		11.22	□□□□□ -0.61
SUPT20H-222	ENST00000495071	DERL1	Q9BUN8	251 aa		11.22	□□□□□ -0.61
SUPT20H-222	ENST00000495071		M0R1X1	148 aa		11.21	□□□□□ -0.61
SUPT20H-222	ENST00000495071	MLNR	O43193	412 aa		11.21	□□□□□ -0.61
SUPT20H-222	ENST00000495071	CNN1	P51911	297 aa	Known RBP	11.21	□□□□□ -0.61
SUPT20H-222	ENST00000495071	SVIL	O95425	2214 aa		11.21	□□□□□ -0.61
SUPT20H-222	ENST00000495071		F6UZH7	168 aa		11.21	□□□□□ -0.61
SUPT20H-222	ENST00000495071	GALR2	O43603	387 aa	Predicted RBP	11.21	□□□□□ -0.61
SUPT20H-222	ENST00000495071	BRWD1-AS2	P59051	145 aa		11.21	□□□□□ -0.61
SUPT20H-222	ENST00000495071	PRSS8	Q16651	343 aa		11.21	□□□□□ -0.61
SUPT20H-222	ENST00000495071	DHRS13	Q6UX07	377 aa		11.21	□□□□□ -0.61
SUPT20H-222	ENST00000495071	TMEM178A	Q8NBL3	297 aa		11.21	□□□□□ -0.61
SUPT20H-222	ENST00000495071	MRPL37	Q9BZE1	423 aa	Known RBP	11.21	□□□□□ -0.61
SUPT20H-222	ENST00000495071	GCG	P01275	180 aa		11.21	□□□□□ -0.62
SUPT20H-222	ENST00000495071	OR9G9	P0C7N8	305 aa		11.21	□□□□□ -0.62
SUPT20H-222	ENST00000495071	C1QTNF9	P0C862	333 aa		11.21	□□□□□ -0.62
SUPT20H-222	ENST00000495071	IL3RA	P26951	378 aa		11.21	□□□□□ -0.62
SUPT20H-222	ENST00000495071	SSX2	Q16385	188 aa		11.21	□□□□□ -0.62
SUPT20H-222	ENST00000495071		Q6ZR03	302 aa		11.21	□□□□□ -0.62
SUPT20H-222	ENST00000495071	DMRTC2	Q8IXT2	367 aa	Predicted RBP	11.21	□□□□□ -0.62
SUPT20H-222	ENST00000495071	ZNF664	Q8N3J9	261 aa		11.21	□□□□□ -0.62
SUPT20H-222	ENST00000495071	MDS2	Q8NDY4	140 aa		11.21	□□□□□ -0.62
SUPT20H-222	ENST00000495071	SGMS2	Q8NHU3	365 aa		11.21	□□□□□ -0.62
SUPT20H-222	ENST00000495071	SPRY4	Q9C004	299 aa		11.21	□□□□□ -0.62
SUPT20H-222	ENST00000495071	C15orf62	A8K5M9	175 aa		11.2	□□□□□ -0.62
SUPT20H-222	ENST00000495071	GGCT	O75223	188 aa	Known RBP	11.2	□□□□□ -0.62
SUPT20H-222	ENST00000495071		P0C879	139 aa		11.2	□□□□□ -0.62
SUPT20H-222	ENST00000495071	KITLG	P21583	273 aa		11.2	□□□□□ -0.62
SUPT20H-222	ENST00000495071	NPPC	P23582	126 aa		11.2	□□□□□ -0.62
SUPT20H-222	ENST00000495071	GNB1	P62873	340 aa		11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms