RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, human

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNX17-209	ENST00000494893	PIPOX	Q9P0Z9	390 aa		13.59	□□□□□ -0.23
SNX17-209	ENST00000494893	PKD1L1	Q8TDX9	2849 aa		13.59	□□□□□ -0.23
SNX17-209	ENST00000494893	VWF	P04275	2813 aa		13.58	□□□□□ -0.24
SNX17-209	ENST00000494893	OR5H14	A6NHG9	310 aa		13.58	□□□□□ -0.24
SNX17-209	ENST00000494893	RAB29	O14966	203 aa		13.58	□□□□□ -0.24
SNX17-209	ENST00000494893	FGF16	O43320	207 aa		13.58	□□□□□ -0.24
SNX17-209	ENST00000494893	MOS	P00540	346 aa		13.58	□□□□□ -0.24
SNX17-209	ENST00000494893	VSIG10L2	P0DP72	767 aa		13.58	□□□□□ -0.24
SNX17-209	ENST00000494893	AADAC	P22760	399 aa		13.58	□□□□□ -0.24
SNX17-209	ENST00000494893	F2RL1	P55085	397 aa		13.58	□□□□□ -0.24
SNX17-209	ENST00000494893	LINC00205	P59089	165 aa		13.58	□□□□□ -0.24
SNX17-209	ENST00000494893	FAM71F2	Q6NXP2	309 aa		13.58	□□□□□ -0.24
SNX17-209	ENST00000494893		Q6ZNX1	250 aa		13.58	□□□□□ -0.24
SNX17-209	ENST00000494893		Q8N9W7	124 aa		13.58	□□□□□ -0.24
SNX17-209	ENST00000494893	MARVELD1	Q9BSK0	173 aa		13.58	□□□□□ -0.24
SNX17-209	ENST00000494893		M0QZK8	103 aa		13.57	□□□□□ -0.24
SNX17-209	ENST00000494893	PPY	P01298	95 aa		13.57	□□□□□ -0.24
SNX17-209	ENST00000494893	H2AFB2	P0C5Z0	115 aa		13.57	□□□□□ -0.24
SNX17-209	ENST00000494893	ECI1	P42126	302 aa		13.57	□□□□□ -0.24
SNX17-209	ENST00000494893	VDAC2	P45880	294 aa	Predicted RBP	13.57	□□□□□ -0.24
SNX17-209	ENST00000494893	SURF2	Q15527	256 aa	Predicted RBP	13.57	□□□□□ -0.24
SNX17-209	ENST00000494893	GLDN	Q6ZMI3	551 aa	Predicted RBP	13.57	□□□□□ -0.24
SNX17-209	ENST00000494893	MOB3A	Q96BX8	217 aa		13.57	□□□□□ -0.24
SNX17-209	ENST00000494893	C20orf85	Q9H1P6	137 aa		13.57	□□□□□ -0.24
SNX17-209	ENST00000494893	NUDT15	Q9NV35	164 aa		13.57	□□□□□ -0.24
SNX17-209	ENST00000494893	OR2W1	Q9Y3N9	320 aa		13.57	□□□□□ -0.24
SNX17-209	ENST00000494893	TRAV6	A0A075B6T7	132 aa		13.56	□□□□□ -0.24
SNX17-209	ENST00000494893	OR8U9	P0C7N5	309 aa		13.56	□□□□□ -0.24
SNX17-209	ENST00000494893	CNTFR	P26992	372 aa		13.56	□□□□□ -0.24
SNX17-209	ENST00000494893	UCP3	P55916	312 aa		13.56	□□□□□ -0.24
SNX17-209	ENST00000494893	HERV-K104	P61576	105 aa		13.56	□□□□□ -0.24
SNX17-209	ENST00000494893	C9orf152	Q5JTZ5	239 aa		13.56	□□□□□ -0.24
SNX17-209	ENST00000494893	FAM71E2	Q8N5Q1	922 aa		13.56	□□□□□ -0.24
SNX17-209	ENST00000494893	C11orf44	Q8N8P7	122 aa		13.56	□□□□□ -0.24
SNX17-209	ENST00000494893	OR8U1	Q8NH10	309 aa		13.56	□□□□□ -0.24
SNX17-209	ENST00000494893	MARCH1	Q8TCQ1	289 aa		13.56	□□□□□ -0.24
SNX17-209	ENST00000494893	SCGB3A2	Q96PL1	93 aa		13.56	□□□□□ -0.24
SNX17-209	ENST00000494893	S1PR3	Q99500	378 aa		13.56	□□□□□ -0.24
SNX17-209	ENST00000494893	GPR132	Q9UNW8	380 aa		13.56	□□□□□ -0.24
SNX17-209	ENST00000494893	FLVCR2	Q9UPI3	526 aa		13.56	□□□□□ -0.24
SNX17-209	ENST00000494893	CMYA5	Q8N3K9	4069 aa		13.56	□□□□□ -0.24
SNX17-209	ENST00000494893	LINC01548	A6NM66	108 aa		13.55	□□□□□ -0.24
SNX17-209	ENST00000494893	INMT-MINDY4	F8WBC2	141 aa		13.55	□□□□□ -0.24
SNX17-209	ENST00000494893		H0YJW9	148 aa		13.55	□□□□□ -0.24
SNX17-209	ENST00000494893	ARPC1B	O15143	372 aa	Known RBP	13.55	□□□□□ -0.24
SNX17-209	ENST00000494893	FXYD4	P59646	89 aa		13.55	□□□□□ -0.24
SNX17-209	ENST00000494893	C10orf99	Q6UWK7	81 aa		13.55	□□□□□ -0.24
SNX17-209	ENST00000494893	DRAXIN	Q8NBI3	349 aa	Predicted RBP	13.55	□□□□□ -0.24
SNX17-209	ENST00000494893	SGMS2	Q8NHU3	365 aa		13.55	□□□□□ -0.24
SNX17-209	ENST00000494893	FXYD6	Q9H0Q3	95 aa		13.55	□□□□□ -0.24
SNX17-209	ENST00000494893	GHITM	Q9H3K2	345 aa		13.55	□□□□□ -0.24
SNX17-209	ENST00000494893	VSIG4	Q9Y279	399 aa		13.55	□□□□□ -0.24
SNX17-209	ENST00000494893	NCBP2L	A6PVI3	153 aa	Known RBP	13.54	□□□□□ -0.24
SNX17-209	ENST00000494893	IGHG2	P01859	326 aa		13.54	□□□□□ -0.24
SNX17-209	ENST00000494893	RLN1	P04808	185 aa		13.54	□□□□□ -0.24
SNX17-209	ENST00000494893	CD28	P10747	220 aa		13.54	□□□□□ -0.24
SNX17-209	ENST00000494893	PGAM2	P15259	253 aa		13.54	□□□□□ -0.24
SNX17-209	ENST00000494893	GPR12	P47775	334 aa		13.54	□□□□□ -0.24
SNX17-209	ENST00000494893	MECP2	P51608	486 aa	Known RBP	13.54	□□□□□ -0.24
SNX17-209	ENST00000494893	PRR31	Q5SQ13	230 aa		13.54	□□□□□ -0.24
SNX17-209	ENST00000494893	ZNF383	Q8NA42	475 aa		13.54	□□□□□ -0.24
SNX17-209	ENST00000494893	OR5AN1	Q8NGI8	311 aa		13.54	□□□□□ -0.24
SNX17-209	ENST00000494893	ZFAND1	Q8TCF1	268 aa		13.54	□□□□□ -0.24
SNX17-209	ENST00000494893	OR2D2	Q9H210	308 aa		13.54	□□□□□ -0.24
SNX17-209	ENST00000494893	SDHAF2	Q9NX18	166 aa		13.54	□□□□□ -0.24
SNX17-209	ENST00000494893	ZNF221	Q9UK13	617 aa		13.54	□□□□□ -0.24
SNX17-209	ENST00000494893	GAB2	Q9UQC2	676 aa		13.54	□□□□□ -0.24
SNX17-209	ENST00000494893	NBEAL1	Q6ZS30	2694 aa		13.54	□□□□□ -0.24
SNX17-209	ENST00000494893	IGKV1D-13	A0A0B4J2D9	117 aa		13.53	□□□□□ -0.24
SNX17-209	ENST00000494893	PEX14	O75381	377 aa		13.53	□□□□□ -0.24
SNX17-209	ENST00000494893	IGKV1-13	P0DP09	117 aa		13.53	□□□□□ -0.24
SNX17-209	ENST00000494893	LUM	P51884	338 aa	Predicted RBP	13.53	□□□□□ -0.24
SNX17-209	ENST00000494893	ARSJ	Q5FYB0	599 aa	Predicted RBP	13.53	□□□□□ -0.24
SNX17-209	ENST00000494893	TCTEX1D4	Q5JR98	221 aa		13.53	□□□□□ -0.24
SNX17-209	ENST00000494893	LPCAT3	Q6P1A2	487 aa		13.53	□□□□□ -0.24
SNX17-209	ENST00000494893	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	13.53	□□□□□ -0.24
SNX17-209	ENST00000494893	OR8H1	Q8NGG4	311 aa		13.53	□□□□□ -0.24
SNX17-209	ENST00000494893	RSRP1	Q9BUV0	290 aa		13.53	□□□□□ -0.24
SNX17-209	ENST00000494893	SLC5A7	Q9GZV3	580 aa		13.53	□□□□□ -0.24
SNX17-209	ENST00000494893	C5orf66	Q9H5L9	145 aa		13.53	□□□□□ -0.24
SNX17-209	ENST00000494893	LIN7C	Q9NUP9	197 aa	Known RBP	13.53	□□□□□ -0.24
SNX17-209	ENST00000494893	ADARB2-AS1	A8MUL3	147 aa		13.52	□□□□□ -0.25
SNX17-209	ENST00000494893		M0R1X1	148 aa		13.52	□□□□□ -0.25
SNX17-209	ENST00000494893	DHFR	P00374	187 aa		13.52	□□□□□ -0.25
SNX17-209	ENST00000494893	CTSD	P07339	412 aa	Predicted RBP	13.52	□□□□□ -0.25
SNX17-209	ENST00000494893	RAB25	P57735	213 aa		13.52	□□□□□ -0.25
SNX17-209	ENST00000494893	MMD	Q15546	238 aa		13.52	□□□□□ -0.25
SNX17-209	ENST00000494893	SLC38A6	Q8IZM9	456 aa		13.52	□□□□□ -0.25
SNX17-209	ENST00000494893	SECTM1	Q8WVN6	248 aa		13.52	□□□□□ -0.25
SNX17-209	ENST00000494893	NOL4L	Q96MY1	436 aa	Predicted RBP	13.52	□□□□□ -0.25
SNX17-209	ENST00000494893	HSPB9	Q9BQS6	159 aa		13.52	□□□□□ -0.25
SNX17-209	ENST00000494893	RTBDN	Q9BSG5	229 aa	Predicted RBP	13.52	□□□□□ -0.25
SNX17-209	ENST00000494893	ALX4	Q9H161	411 aa	Predicted RBP	13.52	□□□□□ -0.25
SNX17-209	ENST00000494893	LINC00527	Q9UJ94	153 aa		13.52	□□□□□ -0.25
SNX17-209	ENST00000494893	C14orf166	Q9Y224	244 aa	Known RBP	13.52	□□□□□ -0.25
SNX17-209	ENST00000494893	FBXO24	O75426	580 aa		13.51	□□□□□ -0.25
SNX17-209	ENST00000494893	NDUFA3	O95167	84 aa		13.51	□□□□□ -0.25
SNX17-209	ENST00000494893	TSPAN15	O95858	294 aa		13.51	□□□□□ -0.25
SNX17-209	ENST00000494893	IGLV2-14	P01704	120 aa		13.51	□□□□□ -0.25
SNX17-209	ENST00000494893	ANXA7	P20073	488 aa	Known RBP	13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms