RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 SSBP2P81877 361 aaPredicted RBP6.88□□□□□ -1.31
ITGB1-217ENST00000494395 NDPQ00604 133 aa6.88□□□□□ -1.31
ITGB1-217ENST00000494395 CDK10Q15131 360 aa6.88□□□□□ -1.31
ITGB1-217ENST00000494395 PSG5Q15238 335 aa6.88□□□□□ -1.31
ITGB1-217ENST00000494395 C19orf54Q5BKX5 351 aa6.88□□□□□ -1.31
ITGB1-217ENST00000494395 ZNF660Q6AZW8 331 aaPredicted RBP6.88□□□□□ -1.31
ITGB1-217ENST00000494395 CENPVQ7Z7K6 275 aaPredicted RBP6.88□□□□□ -1.31
ITGB1-217ENST00000494395 ZNF645Q8N7E2 425 aa6.88□□□□□ -1.31
ITGB1-217ENST00000494395 ISOC1Q96CN7 298 aa6.88□□□□□ -1.31
ITGB1-217ENST00000494395 RBM38Q9H0Z9 239 aaKnown RBP6.88□□□□□ -1.31
ITGB1-217ENST00000494395 MMP27Q9H306 513 aa6.88□□□□□ -1.31
ITGB1-217ENST00000494395 FBXL15Q9H469 300 aa6.88□□□□□ -1.31
ITGB1-217ENST00000494395 SLC35D1Q9NTN3 355 aa6.88□□□□□ -1.31
ITGB1-217ENST00000494395 CCDC59Q9P031 241 aaKnown RBP6.88□□□□□ -1.31
ITGB1-217ENST00000494395 RBMX2Q9Y388 322 aaKnown RBP6.88□□□□□ -1.31
ITGB1-217ENST00000494395 CEPT1Q9Y6K0 416 aa6.88□□□□□ -1.31
ITGB1-217ENST00000494395 MGAM2Q2M2H8 2515 aa6.88□□□□□ -1.31
ITGB1-217ENST00000494395 TNCP24821 2201 aa6.87□□□□□ -1.31
ITGB1-217ENST00000494395 H7C2Y5 167 aa6.87□□□□□ -1.31
ITGB1-217ENST00000494395 FCN1O00602 326 aa6.87□□□□□ -1.31
ITGB1-217ENST00000494395 ATP6V0E1O15342 81 aa6.87□□□□□ -1.31
ITGB1-217ENST00000494395 SLC22A5O76082 557 aa6.87□□□□□ -1.31
ITGB1-217ENST00000494395 TPPPO94811 219 aa6.87□□□□□ -1.31
ITGB1-217ENST00000494395 SPDEFO95238 335 aa6.87□□□□□ -1.31
ITGB1-217ENST00000494395 PPYP01298 95 aa6.87□□□□□ -1.31
ITGB1-217ENST00000494395 APOA2P02652 100 aa6.87□□□□□ -1.31
ITGB1-217ENST00000494395 FCER2P06734 321 aa6.87□□□□□ -1.31
ITGB1-217ENST00000494395 CRYGBP07316 175 aa6.87□□□□□ -1.31
ITGB1-217ENST00000494395 OR5H8P0DN80 308 aa6.87□□□□□ -1.31
ITGB1-217ENST00000494395 EGR2P11161 476 aaPredicted RBP6.87□□□□□ -1.31
ITGB1-217ENST00000494395 AADACP22760 399 aa6.87□□□□□ -1.31
ITGB1-217ENST00000494395 PPIFP30405 207 aaKnown RBP6.87□□□□□ -1.31
ITGB1-217ENST00000494395 PRSS3P35030 304 aa6.87□□□□□ -1.31
ITGB1-217ENST00000494395 THBS3P49746 956 aa6.87□□□□□ -1.31
ITGB1-217ENST00000494395 BRWD1-AS2P59051 145 aa6.87□□□□□ -1.31
ITGB1-217ENST00000494395 ARPC4P59998 168 aa6.87□□□□□ -1.31
ITGB1-217ENST00000494395 RPL30P62888 115 aaKnown RBP6.87□□□□□ -1.31
ITGB1-217ENST00000494395 MSMO1Q15800 293 aa6.87□□□□□ -1.31
ITGB1-217ENST00000494395 MRGPRG-AS1Q2M3A8 158 aa6.87□□□□□ -1.31
ITGB1-217ENST00000494395 MZT2AQ6P582 158 aa6.87□□□□□ -1.31
ITGB1-217ENST00000494395 OVCH2Q7RTZ1 564 aa6.87□□□□□ -1.31
ITGB1-217ENST00000494395 ZNF329Q86UD4 541 aa6.87□□□□□ -1.31
ITGB1-217ENST00000494395 LYSMD2Q8IV50 215 aa6.87□□□□□ -1.31
ITGB1-217ENST00000494395 FOXRED2Q8IWF2 684 aa6.87□□□□□ -1.31
ITGB1-217ENST00000494395 RNF152Q8N8N0 203 aa6.87□□□□□ -1.31
ITGB1-217ENST00000494395 OR4X2Q8NGF9 303 aa6.87□□□□□ -1.31
ITGB1-217ENST00000494395 GIMAP1Q8WWP7 306 aa6.87□□□□□ -1.31
ITGB1-217ENST00000494395 AP3S1Q92572 193 aa6.87□□□□□ -1.31
ITGB1-217ENST00000494395 ADTRPQ96IZ2 230 aa6.87□□□□□ -1.31
ITGB1-217ENST00000494395 SLIRPQ9GZT3 109 aaKnown RBP6.87□□□□□ -1.31
ITGB1-217ENST00000494395 OR51J1Q9H342 316 aa6.87□□□□□ -1.31
ITGB1-217ENST00000494395 SCPEP1Q9HB40 452 aa6.87□□□□□ -1.31
ITGB1-217ENST00000494395 IFT46Q9NQC8 304 aa6.87□□□□□ -1.31
ITGB1-217ENST00000494395 NECAP2Q9NVZ3 263 aa6.87□□□□□ -1.31
ITGB1-217ENST00000494395 KIAA1456Q9P272 454 aa6.87□□□□□ -1.31
ITGB1-217ENST00000494395 FBXO7Q9Y3I1 522 aa6.87□□□□□ -1.31
ITGB1-217ENST00000494395 RBM7Q9Y580 266 aaKnown RBP6.87□□□□□ -1.31
ITGB1-217ENST00000494395 TSSC4Q9Y5U2 329 aaPredicted RBP6.87□□□□□ -1.31
ITGB1-217ENST00000494395 NBEAL1Q6ZS30 2694 aa6.86□□□□□ -1.31
ITGB1-217ENST00000494395 SRRM4A7MD48 611 aaKnown RBP6.86□□□□□ -1.31
ITGB1-217ENST00000494395 J3QRK9 145 aa6.86□□□□□ -1.31
ITGB1-217ENST00000494395 SULT1C2O00338 296 aa6.86□□□□□ -1.31
ITGB1-217ENST00000494395 CTDSP2O14595 271 aa6.86□□□□□ -1.31
ITGB1-217ENST00000494395 IGHG4P01861 327 aa6.86□□□□□ -1.31
ITGB1-217ENST00000494395 OPN1MWP04001 364 aa6.86□□□□□ -1.31
ITGB1-217ENST00000494395 OPN1MW2P0DN77 364 aa6.86□□□□□ -1.31
ITGB1-217ENST00000494395 OPN1MW3P0DN78 364 aa6.86□□□□□ -1.31
ITGB1-217ENST00000494395 RRASP10301 218 aa6.86□□□□□ -1.31
ITGB1-217ENST00000494395 FCGR2CP31995 323 aa6.86□□□□□ -1.31
ITGB1-217ENST00000494395 LGALS7P47929 136 aa6.86□□□□□ -1.31
ITGB1-217ENST00000494395 RFX2P48378 723 aa6.86□□□□□ -1.31
ITGB1-217ENST00000494395 RPS16P62249 146 aaKnown RBP6.86□□□□□ -1.31
ITGB1-217ENST00000494395 CX3CL1P78423 397 aa6.86□□□□□ -1.31
ITGB1-217ENST00000494395 SRSF3P84103 164 aaKnown RBP6.86□□□□□ -1.31
ITGB1-217ENST00000494395 DYRK1AQ13627 763 aa6.86□□□□□ -1.31
ITGB1-217ENST00000494395 NSUN5P1Q3KNT7 163 aa6.86□□□□□ -1.31
ITGB1-217ENST00000494395 LIN54Q6MZP7 749 aa6.86□□□□□ -1.31
ITGB1-217ENST00000494395 DHRS11Q6UWP2 260 aa6.86□□□□□ -1.31
ITGB1-217ENST00000494395 SNX29P2Q8IUI4 249 aa6.86□□□□□ -1.31
ITGB1-217ENST00000494395 LAX1Q8IWV1 398 aa6.86□□□□□ -1.31
ITGB1-217ENST00000494395 COMMD1Q8N668 190 aa6.86□□□□□ -1.31
ITGB1-217ENST00000494395 MYOZ3Q8TDC0 251 aa6.86□□□□□ -1.31
ITGB1-217ENST00000494395 FLYWCH2Q96CP2 140 aaKnown RBP6.86□□□□□ -1.31
ITGB1-217ENST00000494395 ABHD1Q96SE0 405 aa6.86□□□□□ -1.31
ITGB1-217ENST00000494395 TSNAXQ99598 290 aaKnown RBP6.86□□□□□ -1.31
ITGB1-217ENST00000494395 SCOCQ9UIL1 159 aa6.86□□□□□ -1.31
ITGB1-217ENST00000494395 NUBP2Q9Y5Y2 271 aa6.86□□□□□ -1.31
ITGB1-217ENST00000494395 SMIM31A0A1B0GVY4 71 aa6.85□□□□□ -1.31
ITGB1-217ENST00000494395 TCRBV4S1A1TA0A5B7 111 aa6.85□□□□□ -1.31
ITGB1-217ENST00000494395 FAM25AB3EWG3 89 aa6.85□□□□□ -1.31
ITGB1-217ENST00000494395 FAM25CB3EWG5 89 aa6.85□□□□□ -1.31
ITGB1-217ENST00000494395 FAM25GB3EWG6 89 aa6.85□□□□□ -1.31
ITGB1-217ENST00000494395 G3V318 75 aa6.85□□□□□ -1.31
ITGB1-217ENST00000494395 ARPC1BO15143 372 aaKnown RBP6.85□□□□□ -1.31
ITGB1-217ENST00000494395 SLC25A17O43808 307 aa6.85□□□□□ -1.31
ITGB1-217ENST00000494395 ELANEP08246 267 aa6.85□□□□□ -1.31
ITGB1-217ENST00000494395 PSMB8P28062 276 aa6.85□□□□□ -1.31
ITGB1-217ENST00000494395 RCVRNP35243 200 aa6.85□□□□□ -1.31
ITGB1-217ENST00000494395 HRH1P35367 487 aa6.85□□□□□ -1.31
ITGB1-217ENST00000494395 TAS2R46P59540 309 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms