RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 POLR3KQ9Y2Y1 108 aaPredicted RBP16.77■□□□□ 0.28
KPNA1-210ENST00000494339 RNF222A6NCQ9 220 aa16.76■□□□□ 0.27
KPNA1-210ENST00000494339 NUP62P37198 522 aaPredicted RBP16.76■□□□□ 0.27
KPNA1-210ENST00000494339 NMSQ5H8A3 153 aa16.76■□□□□ 0.27
KPNA1-210ENST00000494339 TNFRSF14Q92956 283 aa16.76■□□□□ 0.27
KPNA1-210ENST00000494339 SIRPDQ9H106 197 aa16.76■□□□□ 0.27
KPNA1-210ENST00000494339 CT45A6P0DMU7 189 aa16.76■□□□□ 0.27
KPNA1-210ENST00000494339 CT45A5P0DMU8 189 aa16.76■□□□□ 0.27
KPNA1-210ENST00000494339 CT45A7P0DMV0 189 aa16.76■□□□□ 0.27
KPNA1-210ENST00000494339 AP2S1P53680 142 aaPredicted RBP16.76■□□□□ 0.27
KPNA1-210ENST00000494339 DVL1P1P54792 670 aaPredicted RBP16.76■□□□□ 0.27
KPNA1-210ENST00000494339 FAM219AQ8IW50 185 aa16.76■□□□□ 0.27
KPNA1-210ENST00000494339 ZNF383Q8NA42 475 aa16.76■□□□□ 0.27
KPNA1-210ENST00000494339 DDB2Q92466 427 aa16.76■□□□□ 0.27
KPNA1-210ENST00000494339 TMEM186Q96B77 213 aa16.76■□□□□ 0.27
KPNA1-210ENST00000494339 RBMXL1Q96E39 390 aaKnown RBP16.76■□□□□ 0.27
KPNA1-210ENST00000494339 PRELID3BQ9Y3B1 194 aa16.76■□□□□ 0.27
KPNA1-210ENST00000494339 DEDDO75618 318 aa16.75■□□□□ 0.27
KPNA1-210ENST00000494339 TOX4O94842 621 aa16.75■□□□□ 0.27
KPNA1-210ENST00000494339 S1PR2O95136 353 aa16.75■□□□□ 0.27
KPNA1-210ENST00000494339 SLC25A6P12236 298 aa16.75■□□□□ 0.27
KPNA1-210ENST00000494339 THBS3P49746 956 aa16.75■□□□□ 0.27
KPNA1-210ENST00000494339 THOC7Q6I9Y2 204 aaKnown RBP16.75■□□□□ 0.27
KPNA1-210ENST00000494339 HCP5Q6MZN7 132 aa16.75■□□□□ 0.27
KPNA1-210ENST00000494339 BEND2Q8NDZ0 799 aa16.75■□□□□ 0.27
KPNA1-210ENST00000494339 OR4D5Q8NGN0 318 aa16.75■□□□□ 0.27
KPNA1-210ENST00000494339 LSM10Q969L4 123 aaKnown RBP16.75■□□□□ 0.27
KPNA1-210ENST00000494339 ST6GALNAC6Q969X2 333 aa16.75■□□□□ 0.27
KPNA1-210ENST00000494339 MRPL20Q9BYC9 149 aaKnown RBP16.75■□□□□ 0.27
KPNA1-210ENST00000494339 OR5AC2Q9NZP5 309 aa16.75■□□□□ 0.27
KPNA1-210ENST00000494339 SETXQ7Z333 2677 aaKnown RBP16.75■□□□□ 0.27
KPNA1-210ENST00000494339 IFNA7P01567 189 aa16.74■□□□□ 0.27
KPNA1-210ENST00000494339 ARG1P05089 322 aa16.74■□□□□ 0.27
KPNA1-210ENST00000494339 NDUFA5Q16718 116 aa16.74■□□□□ 0.27
KPNA1-210ENST00000494339 OR4P4Q8NGL7 312 aa16.74■□□□□ 0.27
KPNA1-210ENST00000494339 OR1S1Q8NH92 325 aa16.74■□□□□ 0.27
KPNA1-210ENST00000494339 RNASE11Q8TAA1 199 aaKnown RBP16.74■□□□□ 0.27
KPNA1-210ENST00000494339 INSIG2Q9Y5U4 225 aa16.74■□□□□ 0.27
KPNA1-210ENST00000494339 PDZD2O15018 2839 aa16.74■□□□□ 0.27
KPNA1-210ENST00000494339 A0A096LNT2 108 aa16.74■□□□□ 0.27
KPNA1-210ENST00000494339 A0A1W2PRD5 423 aa16.74■□□□□ 0.27
KPNA1-210ENST00000494339 A0A1W2PRF3 423 aa16.74■□□□□ 0.27
KPNA1-210ENST00000494339 A0A1W2PRM7 423 aa16.74■□□□□ 0.27
KPNA1-210ENST00000494339 BUB1B-PAK6H3BSN5 160 aa16.74■□□□□ 0.27
KPNA1-210ENST00000494339 MBPP02686 304 aaPredicted RBP16.74■□□□□ 0.27
KPNA1-210ENST00000494339 MMP9P14780 707 aa16.74■□□□□ 0.27
KPNA1-210ENST00000494339 IL3RAP26951 378 aa16.74■□□□□ 0.27
KPNA1-210ENST00000494339 ZNF137PP52743 207 aa16.74■□□□□ 0.27
KPNA1-210ENST00000494339 AKR1C2P52895 323 aa16.74■□□□□ 0.27
KPNA1-210ENST00000494339 MAPK1IP1LQ8NDC0 245 aa16.74■□□□□ 0.27
KPNA1-210ENST00000494339 ZNF680Q8NEM1 530 aa16.74■□□□□ 0.27
KPNA1-210ENST00000494339 OR11H6Q8NGC7 330 aa16.74■□□□□ 0.27
KPNA1-210ENST00000494339 CD300LFQ8TDQ1 290 aa16.74■□□□□ 0.27
KPNA1-210ENST00000494339 ADTRPQ96IZ2 230 aa16.74■□□□□ 0.27
KPNA1-210ENST00000494339 UNKLQ9H9P5 680 aaKnown RBP16.74■□□□□ 0.27
KPNA1-210ENST00000494339 A0A0G2JRQ6 117 aa16.73■□□□□ 0.27
KPNA1-210ENST00000494339 KANTRA0A1W2PQU2 76 aa16.73■□□□□ 0.27
KPNA1-210ENST00000494339 RNF223E7ERA6 249 aa16.73■□□□□ 0.27
KPNA1-210ENST00000494339 ST8SIA3O43173 380 aa16.73■□□□□ 0.27
KPNA1-210ENST00000494339 SCGB1D2O95969 90 aa16.73■□□□□ 0.27
KPNA1-210ENST00000494339 KRASP01116 189 aa16.73■□□□□ 0.27
KPNA1-210ENST00000494339 IZUMO4Q1ZYL8 232 aa16.73■□□□□ 0.27
KPNA1-210ENST00000494339 SLC51BQ86UW2 128 aa16.73■□□□□ 0.27
KPNA1-210ENST00000494339 AQP10Q96PS8 301 aa16.73■□□□□ 0.27
KPNA1-210ENST00000494339 ITGB1BP2Q9UKP3 347 aa16.73■□□□□ 0.27
KPNA1-210ENST00000494339 A0A1B0GU03 582 aa16.72■□□□□ 0.27
KPNA1-210ENST00000494339 RNASEK-C17orf49H0YIS7 233 aa16.72■□□□□ 0.27
KPNA1-210ENST00000494339 ATG12O94817 140 aa16.72■□□□□ 0.27
KPNA1-210ENST00000494339 IGKV1-5P01602 117 aa16.72■□□□□ 0.27
KPNA1-210ENST00000494339 HOXB4P17483 251 aaPredicted RBP16.72■□□□□ 0.27
KPNA1-210ENST00000494339 EPHA1P21709 976 aa16.72■□□□□ 0.27
KPNA1-210ENST00000494339 G6PCP35575 357 aa16.72■□□□□ 0.27
KPNA1-210ENST00000494339 FAM71F2Q6NXP2 309 aa16.72■□□□□ 0.27
KPNA1-210ENST00000494339 TGIF2LXQ8IUE1 241 aa16.72■□□□□ 0.27
KPNA1-210ENST00000494339 KRTAP1-3Q8IUG1 177 aa16.72■□□□□ 0.27
KPNA1-210ENST00000494339 FOXRED2Q8IWF2 684 aa16.72■□□□□ 0.27
KPNA1-210ENST00000494339 Q96MF0 132 aa16.72■□□□□ 0.27
KPNA1-210ENST00000494339 TBX15Q96SF7 602 aa16.72■□□□□ 0.27
KPNA1-210ENST00000494339 LSM5Q9Y4Y9 91 aaKnown RBP16.72■□□□□ 0.27
KPNA1-210ENST00000494339 E5RGE8 158 aa16.72■□□□□ 0.27
KPNA1-210ENST00000494339 K7EPK0 472 aa16.72■□□□□ 0.27
KPNA1-210ENST00000494339 BCL2L11O43521 198 aa16.72■□□□□ 0.27
KPNA1-210ENST00000494339 MSMBP08118 114 aa16.72■□□□□ 0.27
KPNA1-210ENST00000494339 FAM71E2Q8N5Q1 922 aa16.72■□□□□ 0.27
KPNA1-210ENST00000494339 RRNAD1Q96FB5 475 aaKnown RBP16.72■□□□□ 0.27
KPNA1-210ENST00000494339 NSG2Q9Y328 171 aa16.72■□□□□ 0.27
KPNA1-210ENST00000494339 AMMECR1Q9Y4X0 333 aaPredicted RBP16.72■□□□□ 0.27
KPNA1-210ENST00000494339 POMT1Q9Y6A1 747 aa16.72■□□□□ 0.27
KPNA1-210ENST00000494339 PRRC2AP48634 2157 aaKnown RBP16.71■□□□□ 0.27
KPNA1-210ENST00000494339 CRYZL1O95825 349 aa16.71■□□□□ 0.27
KPNA1-210ENST00000494339 KIR2DS2P43631 304 aa16.71■□□□□ 0.27
KPNA1-210ENST00000494339 NKX2-1P43699 371 aaPredicted RBP16.71■□□□□ 0.27
KPNA1-210ENST00000494339 OR4S2Q8NH73 311 aa16.71■□□□□ 0.27
KPNA1-210ENST00000494339 GPR146Q96CH1 333 aa16.71■□□□□ 0.27
KPNA1-210ENST00000494339 PLEKHA2Q9HB19 425 aa16.71■□□□□ 0.27
KPNA1-210ENST00000494339 B4DSR2 109 aa16.7■□□□□ 0.26
KPNA1-210ENST00000494339 RBFOX2O43251 390 aaKnown RBP eCLIP16.7■□□□□ 0.26
KPNA1-210ENST00000494339 HPRT1P00492 218 aa16.7■□□□□ 0.26
KPNA1-210ENST00000494339 PAX8Q06710 450 aa16.7■□□□□ 0.26
KPNA1-210ENST00000494339 LDLRAD2Q5SZI1 272 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms