RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 RAMP3O60896 148 aa14.2□□□□□ -0.14
PDLIM7-208ENST00000493815 CMTM1Q8IZ96 169 aa14.2□□□□□ -0.14
PDLIM7-208ENST00000493815 PRRT1Q99946 306 aa14.2□□□□□ -0.14
PDLIM7-208ENST00000493815 PRELID3BQ9Y3B1 194 aa14.2□□□□□ -0.14
PDLIM7-208ENST00000493815 SRRM4A7MD48 611 aaKnown RBP14.2□□□□□ -0.14
PDLIM7-208ENST00000493815 NBR2O15453 112 aa14.2□□□□□ -0.14
PDLIM7-208ENST00000493815 TSPAN9O75954 239 aa14.2□□□□□ -0.14
PDLIM7-208ENST00000493815 NDUFA7O95182 113 aa14.2□□□□□ -0.14
PDLIM7-208ENST00000493815 FAUP35544 74 aaKnown RBP14.2□□□□□ -0.14
PDLIM7-208ENST00000493815 LPCAT3Q6P1A2 487 aa14.2□□□□□ -0.14
PDLIM7-208ENST00000493815 FAM71E2Q8N5Q1 922 aa14.2□□□□□ -0.14
PDLIM7-208ENST00000493815 LINC01006Q8NI28 216 aa14.2□□□□□ -0.14
PDLIM7-208ENST00000493815 HARBI1Q96MB7 349 aa14.2□□□□□ -0.14
PDLIM7-208ENST00000493815 PRSS22Q9GZN4 317 aa14.2□□□□□ -0.14
PDLIM7-208ENST00000493815 FBXL15Q9H469 300 aa14.2□□□□□ -0.14
PDLIM7-208ENST00000493815 SLC2A9Q9NRM0 540 aa14.2□□□□□ -0.14
PDLIM7-208ENST00000493815 M0QZK8 103 aa14.19□□□□□ -0.14
PDLIM7-208ENST00000493815 SHOXO15266 292 aa14.19□□□□□ -0.14
PDLIM7-208ENST00000493815 SPAG16Q8N0X2 631 aa14.19□□□□□ -0.14
PDLIM7-208ENST00000493815 NPBQ8NG41 125 aa14.19□□□□□ -0.14
PDLIM7-208ENST00000493815 OR4F5Q8NH21 305 aa14.19□□□□□ -0.14
PDLIM7-208ENST00000493815 BORCS5Q969J3 196 aa14.19□□□□□ -0.14
PDLIM7-208ENST00000493815 SLC2A8Q9NY64 477 aa14.19□□□□□ -0.14
PDLIM7-208ENST00000493815 SCP2D1Q9UJQ7 156 aa14.19□□□□□ -0.14
PDLIM7-208ENST00000493815 TENM1Q9UKZ4 2725 aa14.18□□□□□ -0.14
PDLIM7-208ENST00000493815 TMEM89A2RUT3 159 aa14.18□□□□□ -0.14
PDLIM7-208ENST00000493815 FGF16O43320 207 aa14.18□□□□□ -0.14
PDLIM7-208ENST00000493815 SLC25A17O43808 307 aa14.18□□□□□ -0.14
PDLIM7-208ENST00000493815 IGLV2-23P01705 113 aa14.18□□□□□ -0.14
PDLIM7-208ENST00000493815 RRASP10301 218 aa14.18□□□□□ -0.14
PDLIM7-208ENST00000493815 TAGLNQ01995 201 aaKnown RBP14.18□□□□□ -0.14
PDLIM7-208ENST00000493815 CATR1Q13166 79 aa14.18□□□□□ -0.14
PDLIM7-208ENST00000493815 CBX3Q13185 183 aa14.18□□□□□ -0.14
PDLIM7-208ENST00000493815 ZNF846Q147U1 533 aa14.18□□□□□ -0.14
PDLIM7-208ENST00000493815 PSG5Q15238 335 aa14.18□□□□□ -0.14
PDLIM7-208ENST00000493815 TMEM177Q53S58 311 aa14.18□□□□□ -0.14
PDLIM7-208ENST00000493815 TBC1D26Q86UD7 250 aa14.18□□□□□ -0.14
PDLIM7-208ENST00000493815 VKORC1L1Q8N0U8 176 aa14.18□□□□□ -0.14
PDLIM7-208ENST00000493815 OR8H1Q8NGG4 311 aa14.18□□□□□ -0.14
PDLIM7-208ENST00000493815 RASL11BQ9BPW5 248 aa14.18□□□□□ -0.14
PDLIM7-208ENST00000493815 WDR12Q9GZL7 423 aaKnown RBP14.18□□□□□ -0.14
PDLIM7-208ENST00000493815 RANBP3Q9H6Z4 567 aaPredicted RBP14.18□□□□□ -0.14
PDLIM7-208ENST00000493815 TPSG1Q9NRR2 321 aa14.18□□□□□ -0.14
PDLIM7-208ENST00000493815 LINC01548A6NM66 108 aa14.17□□□□□ -0.14
PDLIM7-208ENST00000493815 RRHO14718 337 aa14.17□□□□□ -0.14
PDLIM7-208ENST00000493815 VSIG10L2P0DP72 767 aa14.17□□□□□ -0.14
PDLIM7-208ENST00000493815 PIGPP57054 158 aa14.17□□□□□ -0.14
PDLIM7-208ENST00000493815 AWAT1Q58HT5 328 aa14.17□□□□□ -0.14
PDLIM7-208ENST00000493815 ARSJQ5FYB0 599 aaPredicted RBP14.17□□□□□ -0.14
PDLIM7-208ENST00000493815 OR4S2Q8NH73 311 aa14.17□□□□□ -0.14
PDLIM7-208ENST00000493815 OR2T6Q8NHC8 308 aa14.17□□□□□ -0.14
PDLIM7-208ENST00000493815 CLCC1Q96S66 551 aa14.17□□□□□ -0.14
PDLIM7-208ENST00000493815 HSPB9Q9BQS6 159 aa14.17□□□□□ -0.14
PDLIM7-208ENST00000493815 CCDC32Q9BV29 185 aa14.17□□□□□ -0.14
PDLIM7-208ENST00000493815 KIAA1456Q9P272 454 aa14.17□□□□□ -0.14
PDLIM7-208ENST00000493815 METTL1Q9UBP6 276 aaKnown RBP14.17□□□□□ -0.14
PDLIM7-208ENST00000493815 HAX1O00165 279 aa14.17□□□□□ -0.14
PDLIM7-208ENST00000493815 FCN1O00602 326 aa14.17□□□□□ -0.14
PDLIM7-208ENST00000493815 NDUFA3O95167 84 aa14.17□□□□□ -0.14
PDLIM7-208ENST00000493815 CD40LGP29965 261 aa14.17□□□□□ -0.14
PDLIM7-208ENST00000493815 CCR6P51684 374 aa14.17□□□□□ -0.14
PDLIM7-208ENST00000493815 FOXL1Q12952 345 aa14.17□□□□□ -0.14
PDLIM7-208ENST00000493815 PLGLAQ15195 96 aa14.17□□□□□ -0.14
PDLIM7-208ENST00000493815 C5orf64Q2M2E5 130 aa14.17□□□□□ -0.14
PDLIM7-208ENST00000493815 Q8N2B8 174 aa14.17□□□□□ -0.14
PDLIM7-208ENST00000493815 ZFAND1Q8TCF1 268 aa14.17□□□□□ -0.14
PDLIM7-208ENST00000493815 TSNAXQ99598 290 aaKnown RBP14.17□□□□□ -0.14
PDLIM7-208ENST00000493815 RNF5Q99942 180 aa14.17□□□□□ -0.14
PDLIM7-208ENST00000493815 RTBDNQ9BSG5 229 aaPredicted RBP14.17□□□□□ -0.14
PDLIM7-208ENST00000493815 C5orf66Q9H5L9 145 aa14.17□□□□□ -0.14
PDLIM7-208ENST00000493815 C16orf95Q9H693 158 aa14.17□□□□□ -0.14
PDLIM7-208ENST00000493815 BEX1Q9HBH7 125 aa14.17□□□□□ -0.14
PDLIM7-208ENST00000493815 LIN7CQ9NUP9 197 aaKnown RBP14.17□□□□□ -0.14
PDLIM7-208ENST00000493815 VSIG4Q9Y279 399 aa14.17□□□□□ -0.14
PDLIM7-208ENST00000493815 MPPED1O15442 326 aa14.16□□□□□ -0.14
PDLIM7-208ENST00000493815 PLA2G10O15496 165 aa14.16□□□□□ -0.14
PDLIM7-208ENST00000493815 F2RP25116 425 aa14.16□□□□□ -0.14
PDLIM7-208ENST00000493815 SERTAD4Q9NUC0 356 aa14.16□□□□□ -0.14
PDLIM7-208ENST00000493815 LINC00527Q9UJ94 153 aa14.16□□□□□ -0.14
PDLIM7-208ENST00000493815 GPR132Q9UNW8 380 aa14.16□□□□□ -0.14
PDLIM7-208ENST00000493815 RNF114Q9Y508 228 aa14.16□□□□□ -0.14
PDLIM7-208ENST00000493815 CLPSL1A2RUU4 121 aa14.15□□□□□ -0.14
PDLIM7-208ENST00000493815 CTSDP07339 412 aaPredicted RBP14.15□□□□□ -0.14
PDLIM7-208ENST00000493815 S100GP29377 79 aa14.15□□□□□ -0.14
PDLIM7-208ENST00000493815 KIR2DS2P43631 304 aa14.15□□□□□ -0.14
PDLIM7-208ENST00000493815 LGALS7P47929 136 aa14.15□□□□□ -0.14
PDLIM7-208ENST00000493815 PJVKQ0ZLH3 352 aa14.15□□□□□ -0.14
PDLIM7-208ENST00000493815 KRTAP21-3Q3LHN1 58 aa14.15□□□□□ -0.14
PDLIM7-208ENST00000493815 LIN54Q6MZP7 749 aa14.15□□□□□ -0.14
PDLIM7-208ENST00000493815 POC5Q8NA72 575 aa14.15□□□□□ -0.14
PDLIM7-208ENST00000493815 ADAD2Q8NCV1 583 aaKnown RBP14.15□□□□□ -0.14
PDLIM7-208ENST00000493815 OSR1Q8TAX0 266 aaPredicted RBP14.15□□□□□ -0.14
PDLIM7-208ENST00000493815 DEDD2Q8WXF8 326 aa14.15□□□□□ -0.14
PDLIM7-208ENST00000493815 ZNF486Q96H40 463 aaPredicted RBP14.15□□□□□ -0.14
PDLIM7-208ENST00000493815 COPZ2Q9P299 210 aa14.15□□□□□ -0.14
PDLIM7-208ENST00000493815 C14orf166Q9Y224 244 aaKnown RBP14.15□□□□□ -0.14
PDLIM7-208ENST00000493815 S1PR2O95136 353 aa14.14□□□□□ -0.15
PDLIM7-208ENST00000493815 RPA2P15927 270 aa14.14□□□□□ -0.15
PDLIM7-208ENST00000493815 BTCP35070 178 aa14.14□□□□□ -0.15
PDLIM7-208ENST00000493815 ECI1P42126 302 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms