RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 SRPXP78539 464 aa11.51□□□□□ -0.57
PDZRN3-210ENST00000492909 BTNL3Q6UXE8 466 aa11.51□□□□□ -0.57
PDZRN3-210ENST00000492909 ZNF66Q6ZN08 573 aa11.51□□□□□ -0.57
PDZRN3-210ENST00000492909 LYG1Q8N1E2 194 aa11.51□□□□□ -0.57
PDZRN3-210ENST00000492909 ABHD12Q8N2K0 398 aa11.51□□□□□ -0.57
PDZRN3-210ENST00000492909 KIR3DL3Q8N743 410 aa11.51□□□□□ -0.57
PDZRN3-210ENST00000492909 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.51□□□□□ -0.57
PDZRN3-210ENST00000492909 OR9G1Q8NH87 305 aa11.51□□□□□ -0.57
PDZRN3-210ENST00000492909 HSD17B10Q99714 261 aaKnown RBP11.51□□□□□ -0.57
PDZRN3-210ENST00000492909 LIN7CQ9NUP9 197 aaKnown RBP11.51□□□□□ -0.57
PDZRN3-210ENST00000492909 IGHV2-70DA0A0C4DH43 119 aa11.5□□□□□ -0.57
PDZRN3-210ENST00000492909 J3QR06 171 aa11.5□□□□□ -0.57
PDZRN3-210ENST00000492909 TAAR5O14804 337 aa11.5□□□□□ -0.57
PDZRN3-210ENST00000492909 FAM157CP0CG43 387 aa11.5□□□□□ -0.57
PDZRN3-210ENST00000492909 ZNF16P17020 682 aaPredicted RBP11.5□□□□□ -0.57
PDZRN3-210ENST00000492909 EIF5AP63241 154 aaKnown RBP11.5□□□□□ -0.57
PDZRN3-210ENST00000492909 DEFA5Q01523 94 aa11.5□□□□□ -0.57
PDZRN3-210ENST00000492909 PAX2Q02962 417 aa11.5□□□□□ -0.57
PDZRN3-210ENST00000492909 CATR1Q13166 79 aa11.5□□□□□ -0.57
PDZRN3-210ENST00000492909 EIF4EBP1Q13541 118 aaPredicted RBP11.5□□□□□ -0.57
PDZRN3-210ENST00000492909 LIAT1Q6ZQX7 453 aa11.5□□□□□ -0.57
PDZRN3-210ENST00000492909 C1orf122Q6ZSJ8 110 aa11.5□□□□□ -0.57
PDZRN3-210ENST00000492909 LINC00311Q8N616 119 aa11.5□□□□□ -0.57
PDZRN3-210ENST00000492909 Q8N7P7 452 aa11.5□□□□□ -0.57
PDZRN3-210ENST00000492909 ZNF596Q8TC21 504 aa11.5□□□□□ -0.57
PDZRN3-210ENST00000492909 MSI2Q96DH6 328 aaKnown RBP11.5□□□□□ -0.57
PDZRN3-210ENST00000492909 POLR3KQ9Y2Y1 108 aaPredicted RBP11.5□□□□□ -0.57
PDZRN3-210ENST00000492909 VPS13CQ709C8 3753 aa11.5□□□□□ -0.57
PDZRN3-210ENST00000492909 CCDC168Q8NDH2 2452 aa11.49□□□□□ -0.57
PDZRN3-210ENST00000492909 SAA2-SAA4A0A096LPE2 208 aa11.49□□□□□ -0.57
PDZRN3-210ENST00000492909 IGHV2-26A0A0B4J1V2 119 aa11.49□□□□□ -0.57
PDZRN3-210ENST00000492909 TMEM218A2RU14 115 aa11.49□□□□□ -0.57
PDZRN3-210ENST00000492909 FAM157AC9JC47 383 aa11.49□□□□□ -0.57
PDZRN3-210ENST00000492909 PROP1O75360 226 aa11.49□□□□□ -0.57
PDZRN3-210ENST00000492909 SAA2P0DJI9 122 aaPredicted RBP11.49□□□□□ -0.57
PDZRN3-210ENST00000492909 USF1P22415 310 aaPredicted RBP11.49□□□□□ -0.57
PDZRN3-210ENST00000492909 UCP1P25874 307 aa11.49□□□□□ -0.57
PDZRN3-210ENST00000492909 RPL39P5Q59GN2 51 aa11.49□□□□□ -0.57
PDZRN3-210ENST00000492909 ODF3L1Q8IXM7 274 aa11.49□□□□□ -0.57
PDZRN3-210ENST00000492909 LGI3Q8N145 548 aa11.49□□□□□ -0.57
PDZRN3-210ENST00000492909 LRTM2Q8N967 370 aa11.49□□□□□ -0.57
PDZRN3-210ENST00000492909 TMED6Q8WW62 240 aa11.49□□□□□ -0.57
PDZRN3-210ENST00000492909 NKX6-2Q9C056 277 aaPredicted RBP11.49□□□□□ -0.57
PDZRN3-210ENST00000492909 MMP26Q9NRE1 261 aa11.49□□□□□ -0.57
PDZRN3-210ENST00000492909 GSKIPQ9P0R6 139 aa11.49□□□□□ -0.57
PDZRN3-210ENST00000492909 KPTNQ9Y664 436 aa11.49□□□□□ -0.57
PDZRN3-210ENST00000492909 MAP1AP78559 2803 aaPredicted RBP11.49□□□□□ -0.57
PDZRN3-210ENST00000492909 M0R1X1 148 aa11.49□□□□□ -0.57
PDZRN3-210ENST00000492909 TOR1AO14656 332 aa11.49□□□□□ -0.57
PDZRN3-210ENST00000492909 SERPINE2P07093 398 aa11.49□□□□□ -0.57
PDZRN3-210ENST00000492909 HKR1P10072 659 aa11.49□□□□□ -0.57
PDZRN3-210ENST00000492909 S100A10P60903 97 aa11.49□□□□□ -0.57
PDZRN3-210ENST00000492909 Q5PR19 223 aa11.49□□□□□ -0.57
PDZRN3-210ENST00000492909 TCTEX1D1Q8N7M0 179 aa11.49□□□□□ -0.57
PDZRN3-210ENST00000492909 OR10X1Q8NGY0 326 aa11.49□□□□□ -0.57
PDZRN3-210ENST00000492909 TCTEX1D2Q8WW35 142 aa11.49□□□□□ -0.57
PDZRN3-210ENST00000492909 TNFRSF14Q92956 283 aa11.49□□□□□ -0.57
PDZRN3-210ENST00000492909 NARS2Q96I59 477 aaKnown RBP11.49□□□□□ -0.57
PDZRN3-210ENST00000492909 S1PR3Q99500 378 aa11.49□□□□□ -0.57
PDZRN3-210ENST00000492909 CLEC7AQ9BXN2 247 aa11.49□□□□□ -0.57
PDZRN3-210ENST00000492909 ZNRD1Q9P1U0 126 aa11.49□□□□□ -0.57
PDZRN3-210ENST00000492909 ABCA2Q9BZC7 2435 aa11.48□□□□□ -0.57
PDZRN3-210ENST00000492909 PIGBOS1A0A0B4J2F0 54 aa11.48□□□□□ -0.57
PDZRN3-210ENST00000492909 ATG12O94817 140 aa11.48□□□□□ -0.57
PDZRN3-210ENST00000492909 CDS2O95674 445 aa11.48□□□□□ -0.57
PDZRN3-210ENST00000492909 IFNA21P01568 189 aa11.48□□□□□ -0.57
PDZRN3-210ENST00000492909 PRTN3P24158 256 aa11.48□□□□□ -0.57
PDZRN3-210ENST00000492909 DUTP33316 252 aaKnown RBP11.48□□□□□ -0.57
PDZRN3-210ENST00000492909 PRRX1P54821 245 aa11.48□□□□□ -0.57
PDZRN3-210ENST00000492909 DLX1P56177 255 aa11.48□□□□□ -0.57
PDZRN3-210ENST00000492909 RPL30P62888 115 aaKnown RBP11.48□□□□□ -0.57
PDZRN3-210ENST00000492909 IAH1Q2TAA2 248 aaPredicted RBP11.48□□□□□ -0.57
PDZRN3-210ENST00000492909 TMEM268Q5VZI3 342 aa11.48□□□□□ -0.57
PDZRN3-210ENST00000492909 FAM122CQ6P4D5 195 aa11.48□□□□□ -0.57
PDZRN3-210ENST00000492909 IL34Q6ZMJ4 242 aa11.48□□□□□ -0.57
PDZRN3-210ENST00000492909 OR13D1Q8NGV5 346 aa11.48□□□□□ -0.57
PDZRN3-210ENST00000492909 SAT2Q96F10 170 aaPredicted RBP11.48□□□□□ -0.57
PDZRN3-210ENST00000492909 TMEM56Q96MV1 263 aa11.48□□□□□ -0.57
PDZRN3-210ENST00000492909 ZNF251Q9BRH9 671 aa11.48□□□□□ -0.57
PDZRN3-210ENST00000492909 LPAR2Q9HBW0 351 aa11.48□□□□□ -0.57
PDZRN3-210ENST00000492909 SIRT7Q9NRC8 400 aa11.48□□□□□ -0.57
PDZRN3-210ENST00000492909 TMEM56-RWDD3S4R434 201 aa11.48□□□□□ -0.57
PDZRN3-210ENST00000492909 PRRC2AP48634 2157 aaKnown RBP11.47□□□□□ -0.57
PDZRN3-210ENST00000492909 LINC00473A8K010 186 aa11.47□□□□□ -0.57
PDZRN3-210ENST00000492909 NUPL2O15504 423 aaKnown RBP11.47□□□□□ -0.57
PDZRN3-210ENST00000492909 SMCO1Q147U7 214 aa11.47□□□□□ -0.57
PDZRN3-210ENST00000492909 C10orf91Q5T1B1 145 aa11.47□□□□□ -0.57
PDZRN3-210ENST00000492909 GGNBP1Q5YKI7 109 aa11.47□□□□□ -0.57
PDZRN3-210ENST00000492909 EIF5AL1Q6IS14 154 aaKnown RBP11.47□□□□□ -0.57
PDZRN3-210ENST00000492909 PRSS57Q6UWY2 283 aa11.47□□□□□ -0.57
PDZRN3-210ENST00000492909 ZNF695Q8IW36 515 aa11.47□□□□□ -0.57
PDZRN3-210ENST00000492909 IL22RA2Q969J5 263 aa11.47□□□□□ -0.57
PDZRN3-210ENST00000492909 UNKLQ9H9P5 680 aaKnown RBP11.47□□□□□ -0.57
PDZRN3-210ENST00000492909 ZC4H2Q9NQZ6 224 aa11.47□□□□□ -0.57
PDZRN3-210ENST00000492909 DEDDO75618 318 aa11.46□□□□□ -0.57
PDZRN3-210ENST00000492909 IGLV1-47P01700 117 aa11.46□□□□□ -0.57
PDZRN3-210ENST00000492909 CTRB1P17538 263 aa11.46□□□□□ -0.57
PDZRN3-210ENST00000492909 COX7A1P24310 79 aa11.46□□□□□ -0.57
PDZRN3-210ENST00000492909 IL3RAP26951 378 aa11.46□□□□□ -0.57
PDZRN3-210ENST00000492909 DVL1P1P54792 670 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms