RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 A0A1W2PPI3 338 aa17.79■□□□□ 0.44
PSPC1-204ENST00000492741 FAM25EA8MYX2 175 aa17.79■□□□□ 0.44
PSPC1-204ENST00000492741 TIMM23O14925 209 aa17.79■□□□□ 0.44
PSPC1-204ENST00000492741 S1PR2O95136 353 aa17.79■□□□□ 0.44
PSPC1-204ENST00000492741 HPRT1P00492 218 aa17.79■□□□□ 0.44
PSPC1-204ENST00000492741 RAB13P51153 203 aa17.79■□□□□ 0.44
PSPC1-204ENST00000492741 LYZL2Q7Z4W2 148 aa17.79■□□□□ 0.44
PSPC1-204ENST00000492741 DYNAPQ8N1N2 210 aa17.79■□□□□ 0.44
PSPC1-204ENST00000492741 SLC35G3Q8N808 338 aa17.79■□□□□ 0.44
PSPC1-204ENST00000492741 LRTM2Q8N967 370 aa17.79■□□□□ 0.44
PSPC1-204ENST00000492741 ZNF469Q96JG9 3925 aaPredicted RBP17.79■□□□□ 0.44
PSPC1-204ENST00000492741 HMX3A6NHT5 357 aa17.78■□□□□ 0.44
PSPC1-204ENST00000492741 RBFOX2O43251 390 aaKnown RBP eCLIP17.78■□□□□ 0.44
PSPC1-204ENST00000492741 ADAP1O75689 374 aa17.78■□□□□ 0.44
PSPC1-204ENST00000492741 IFNA21P01568 189 aa17.78■□□□□ 0.44
PSPC1-204ENST00000492741 AKR1C2P52895 323 aa17.78■□□□□ 0.44
PSPC1-204ENST00000492741 DHRS7BQ6IAN0 325 aaPredicted RBP17.78■□□□□ 0.44
PSPC1-204ENST00000492741 IL22RA2Q969J5 263 aa17.78■□□□□ 0.44
PSPC1-204ENST00000492741 RBMXL1Q96E39 390 aaKnown RBP17.78■□□□□ 0.44
PSPC1-204ENST00000492741 MS4A7Q9GZW8 240 aaPredicted RBP17.78■□□□□ 0.44
PSPC1-204ENST00000492741 NUP50Q9UKX7 468 aa17.78■□□□□ 0.44
PSPC1-204ENST00000492741 MYO9AB2RTY4 2548 aa17.78■□□□□ 0.44
PSPC1-204ENST00000492741 CCSO14618 274 aa17.78■□□□□ 0.44
PSPC1-204ENST00000492741 ATG12O94817 140 aa17.78■□□□□ 0.44
PSPC1-204ENST00000492741 KRASP01116 189 aa17.78■□□□□ 0.44
PSPC1-204ENST00000492741 IGKV1-16P04430 117 aa17.78■□□□□ 0.44
PSPC1-204ENST00000492741 BPIFB3P59826 476 aa17.78■□□□□ 0.44
PSPC1-204ENST00000492741 PDPNQ86YL7 162 aa17.78■□□□□ 0.44
PSPC1-204ENST00000492741 FLYWCH2Q96CP2 140 aaKnown RBP17.78■□□□□ 0.44
PSPC1-204ENST00000492741 RRNAD1Q96FB5 475 aaKnown RBP17.78■□□□□ 0.44
PSPC1-204ENST00000492741 PLEKHA2Q9HB19 425 aa17.78■□□□□ 0.44
PSPC1-204ENST00000492741 RAB18Q9NP72 206 aa17.78■□□□□ 0.44
PSPC1-204ENST00000492741 A0A0U1RQK1 487 aa17.77■□□□□ 0.44
PSPC1-204ENST00000492741 C13orf42A0A1B0GVH6 325 aa17.77■□□□□ 0.44
PSPC1-204ENST00000492741 C5orf51A6NDU8 294 aa17.77■□□□□ 0.44
PSPC1-204ENST00000492741 DBX1A6NMT0 343 aa17.77■□□□□ 0.44
PSPC1-204ENST00000492741 SHOXO15266 292 aa17.77■□□□□ 0.44
PSPC1-204ENST00000492741 IGKV1-39P01597 117 aa17.77■□□□□ 0.44
PSPC1-204ENST00000492741 IGKV1D-39P04432 117 aa17.77■□□□□ 0.44
PSPC1-204ENST00000492741 RPS16P62249 146 aaKnown RBP17.77■□□□□ 0.44
PSPC1-204ENST00000492741 C2orf68Q2NKX9 166 aa17.77■□□□□ 0.44
PSPC1-204ENST00000492741 SPNS3Q6ZMD2 512 aa17.77■□□□□ 0.44
PSPC1-204ENST00000492741 TEX29Q8N6K0 151 aa17.77■□□□□ 0.44
PSPC1-204ENST00000492741 AJUBAQ96IF1 538 aa17.77■□□□□ 0.44
PSPC1-204ENST00000492741 SVEP1Q4LDE5 3571 aa17.77■□□□□ 0.43
PSPC1-204ENST00000492741 SULT1A3P0DMM9 295 aa17.76■□□□□ 0.43
PSPC1-204ENST00000492741 SULT1A4P0DMN0 295 aa17.76■□□□□ 0.43
PSPC1-204ENST00000492741 G6PCP35575 357 aa17.76■□□□□ 0.43
PSPC1-204ENST00000492741 ERVK-16P61578 105 aa17.76■□□□□ 0.43
PSPC1-204ENST00000492741 KRTAP1-1Q07627 177 aa17.76■□□□□ 0.43
PSPC1-204ENST00000492741 DMBX1Q8NFW5 382 aa17.76■□□□□ 0.43
PSPC1-204ENST00000492741 OR11H7Q8NGC8 314 aa17.76■□□□□ 0.43
PSPC1-204ENST00000492741 OR4C13Q8NGP0 309 aa17.76■□□□□ 0.43
PSPC1-204ENST00000492741 ZANQ9Y493 2812 aa17.76■□□□□ 0.43
PSPC1-204ENST00000492741 SIX6O95475 246 aa17.75■□□□□ 0.43
PSPC1-204ENST00000492741 CXCL3P19876 107 aa17.75■□□□□ 0.43
PSPC1-204ENST00000492741 VDAC1P21796 283 aa17.75■□□□□ 0.43
PSPC1-204ENST00000492741 CD1BP29016 333 aa17.75■□□□□ 0.43
PSPC1-204ENST00000492741 BRS3P32247 399 aa17.75■□□□□ 0.43
PSPC1-204ENST00000492741 HES1Q14469 280 aa17.75■□□□□ 0.43
PSPC1-204ENST00000492741 GGNBP1Q5YKI7 109 aa17.75■□□□□ 0.43
PSPC1-204ENST00000492741 GSG1LQ6UXU4 331 aa17.75■□□□□ 0.43
PSPC1-204ENST00000492741 SSX9Q7RTT3 188 aa17.75■□□□□ 0.43
PSPC1-204ENST00000492741 R3HDM4Q96D70 268 aa17.75■□□□□ 0.43
PSPC1-204ENST00000492741 HARBI1Q96MB7 349 aa17.75■□□□□ 0.43
PSPC1-204ENST00000492741 PDCD10Q9BUL8 212 aa17.75■□□□□ 0.43
PSPC1-204ENST00000492741 COMMD9Q9P000 198 aa17.75■□□□□ 0.43
PSPC1-204ENST00000492741 TMED3Q9Y3Q3 217 aa17.75■□□□□ 0.43
PSPC1-204ENST00000492741 DUXBA0A1W2PPF3 345 aa17.75■□□□□ 0.43
PSPC1-204ENST00000492741 HRASP01112 189 aa17.75■□□□□ 0.43
PSPC1-204ENST00000492741 FBP1P09467 338 aa17.75■□□□□ 0.43
PSPC1-204ENST00000492741 CD99P14209 185 aa17.75■□□□□ 0.43
PSPC1-204ENST00000492741 NQO2P16083 231 aa17.75■□□□□ 0.43
PSPC1-204ENST00000492741 CD24P25063 80 aa17.75■□□□□ 0.43
PSPC1-204ENST00000492741 FLNAP21333 2647 aaKnown RBP17.75■□□□□ 0.43
PSPC1-204ENST00000492741 MARCH11A6NNE9 402 aa17.74■□□□□ 0.43
PSPC1-204ENST00000492741 VKORC1L1Q8N0U8 176 aa17.74■□□□□ 0.43
PSPC1-204ENST00000492741 OSR1Q8TAX0 266 aaPredicted RBP17.74■□□□□ 0.43
PSPC1-204ENST00000492741 C22orf15Q8WYQ4 148 aa17.74■□□□□ 0.43
PSPC1-204ENST00000492741 CFHR4Q92496 578 aa17.74■□□□□ 0.43
PSPC1-204ENST00000492741 SEC22AQ96IW7 307 aa17.74■□□□□ 0.43
PSPC1-204ENST00000492741 AIFM2Q9BRQ8 373 aa17.74■□□□□ 0.43
PSPC1-204ENST00000492741 CHIAQ9BZP6 476 aa17.74■□□□□ 0.43
PSPC1-204ENST00000492741 SOX21Q9Y651 276 aaPredicted RBP17.74■□□□□ 0.43
PSPC1-204ENST00000492741 CELSR1Q9NYQ6 3014 aa17.73■□□□□ 0.43
PSPC1-204ENST00000492741 IGKV1D-33P01593 117 aa17.73■□□□□ 0.43
PSPC1-204ENST00000492741 IGKV1-33P01594 117 aa17.73■□□□□ 0.43
PSPC1-204ENST00000492741 TRAPPC2P0DI81 140 aa17.73■□□□□ 0.43
PSPC1-204ENST00000492741 TRAPPC2BP0DI82 140 aa17.73■□□□□ 0.43
PSPC1-204ENST00000492741 CD83Q01151 205 aa17.73■□□□□ 0.43
PSPC1-204ENST00000492741 TMEM177Q53S58 311 aa17.73■□□□□ 0.43
PSPC1-204ENST00000492741 FAM120AOSQ5T036 256 aa17.73■□□□□ 0.43
PSPC1-204ENST00000492741 H2BFWTQ7Z2G1 175 aa17.73■□□□□ 0.43
PSPC1-204ENST00000492741 OR5M8Q8NGP6 311 aa17.73■□□□□ 0.43
PSPC1-204ENST00000492741 SMR3AQ99954 134 aa17.73■□□□□ 0.43
PSPC1-204ENST00000492741 TEX15Q9BXT5 2789 aa17.73■□□□□ 0.43
PSPC1-204ENST00000492741 MPTX1A8MV57 137 aa17.72■□□□□ 0.43
PSPC1-204ENST00000492741 VENTXO95231 258 aa17.72■□□□□ 0.43
PSPC1-204ENST00000492741 HLA-GP17693 338 aa17.72■□□□□ 0.43
PSPC1-204ENST00000492741 SRP14P37108 136 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms