RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 MCRIP1C9JLW8 97 aa7.15□□□□□ -1.26
HDAC3-212ENST00000492407 C3orf84H3BNL1 204 aa7.15□□□□□ -1.26
HDAC3-212ENST00000492407 K7EP13 123 aa7.15□□□□□ -1.26
HDAC3-212ENST00000492407 AIPO00170 330 aa7.15□□□□□ -1.26
HDAC3-212ENST00000492407 GEMIN2O14893 280 aaKnown RBP7.15□□□□□ -1.26
HDAC3-212ENST00000492407 OGG1O15527 345 aa7.15□□□□□ -1.26
HDAC3-212ENST00000492407 LANCL1O43813 399 aa7.15□□□□□ -1.26
HDAC3-212ENST00000492407 EIF3GO75821 320 aaKnown RBP eCLIP7.15□□□□□ -1.26
HDAC3-212ENST00000492407 SCO1O75880 301 aa7.15□□□□□ -1.26
HDAC3-212ENST00000492407 CDRT1O95170 752 aa7.15□□□□□ -1.26
HDAC3-212ENST00000492407 IGHV3-7P01780 117 aa7.15□□□□□ -1.26
HDAC3-212ENST00000492407 RPLP1P05386 114 aaKnown RBP7.15□□□□□ -1.26
HDAC3-212ENST00000492407 IL7P13232 177 aa7.15□□□□□ -1.26
HDAC3-212ENST00000492407 IGFBP3P17936 291 aaPredicted RBP7.15□□□□□ -1.26
HDAC3-212ENST00000492407 PSMB8P28062 276 aa7.15□□□□□ -1.26
HDAC3-212ENST00000492407 SERPINB10P48595 397 aa7.15□□□□□ -1.26
HDAC3-212ENST00000492407 RUNX1Q01196 453 aa7.15□□□□□ -1.26
HDAC3-212ENST00000492407 BTN1A1Q13410 526 aa7.15□□□□□ -1.26
HDAC3-212ENST00000492407 PSG3Q16557 428 aa7.15□□□□□ -1.26
HDAC3-212ENST00000492407 LTC4SQ16873 150 aa7.15□□□□□ -1.26
HDAC3-212ENST00000492407 ATAD3CQ5T2N8 411 aa7.15□□□□□ -1.26
HDAC3-212ENST00000492407 C18orf65Q6ZTR6 163 aa7.15□□□□□ -1.26
HDAC3-212ENST00000492407 ZNF439Q8NDP4 499 aa7.15□□□□□ -1.26
HDAC3-212ENST00000492407 OR10K1Q8NGX5 313 aa7.15□□□□□ -1.26
HDAC3-212ENST00000492407 MYOZ3Q8TDC0 251 aa7.15□□□□□ -1.26
HDAC3-212ENST00000492407 RGP1Q92546 391 aaPredicted RBP7.15□□□□□ -1.26
HDAC3-212ENST00000492407 SMIM19Q96E16 107 aa7.15□□□□□ -1.26
HDAC3-212ENST00000492407 UBE2E2Q96LR5 201 aa7.15□□□□□ -1.26
HDAC3-212ENST00000492407 RDH12Q96NR8 316 aa7.15□□□□□ -1.26
HDAC3-212ENST00000492407 CKLFQ9UBR5 152 aa7.15□□□□□ -1.26
HDAC3-212ENST00000492407 SMPXQ9UHP9 88 aa7.15□□□□□ -1.26
HDAC3-212ENST00000492407 LINC00527Q9UJ94 153 aa7.15□□□□□ -1.26
HDAC3-212ENST00000492407 TRAV39A0A0B4J263 110 aa7.14□□□□□ -1.27
HDAC3-212ENST00000492407 TRBV5-5A0A0J9YX44 114 aa7.14□□□□□ -1.27
HDAC3-212ENST00000492407 A0A1W2PPE3 182 aa7.14□□□□□ -1.27
HDAC3-212ENST00000492407 F8WDY8 70 aa7.14□□□□□ -1.27
HDAC3-212ENST00000492407 RGS10O43665 173 aa7.14□□□□□ -1.27
HDAC3-212ENST00000492407 SC5DO75845 299 aa7.14□□□□□ -1.27
HDAC3-212ENST00000492407 TUSC2O75896 110 aa7.14□□□□□ -1.27
HDAC3-212ENST00000492407 OR8U8P0C7N1 319 aa7.14□□□□□ -1.27
HDAC3-212ENST00000492407 METTL15P1P0C7V9 234 aa7.14□□□□□ -1.27
HDAC3-212ENST00000492407 VSIG8P0DPA2 414 aa7.14□□□□□ -1.27
HDAC3-212ENST00000492407 RRASP10301 218 aa7.14□□□□□ -1.27
HDAC3-212ENST00000492407 FSTP19883 344 aa7.14□□□□□ -1.27
HDAC3-212ENST00000492407 CHATP28329 748 aa7.14□□□□□ -1.27
HDAC3-212ENST00000492407 SOX2P48431 317 aa7.14□□□□□ -1.27
HDAC3-212ENST00000492407 TMBIM6P55061 237 aa7.14□□□□□ -1.27
HDAC3-212ENST00000492407 P2RY14Q15391 338 aa7.14□□□□□ -1.27
HDAC3-212ENST00000492407 LCNL1Q6ZST4 164 aa7.14□□□□□ -1.27
HDAC3-212ENST00000492407 TFAP2CQ92754 450 aa7.14□□□□□ -1.27
HDAC3-212ENST00000492407 CSTL1Q9H114 145 aa7.14□□□□□ -1.27
HDAC3-212ENST00000492407 AMBNQ9NP70 447 aa7.14□□□□□ -1.27
HDAC3-212ENST00000492407 TRAPPC2LQ9UL33 140 aa7.14□□□□□ -1.27
HDAC3-212ENST00000492407 IGHV3-72A0A0B4J1Y9 119 aa7.13□□□□□ -1.27
HDAC3-212ENST00000492407 A0A1W2PPV4 95 aa7.13□□□□□ -1.27
HDAC3-212ENST00000492407 METTL21EPA6NDL7 271 aa7.13□□□□□ -1.27
HDAC3-212ENST00000492407 SEC14L6B5MCN3 397 aa7.13□□□□□ -1.27
HDAC3-212ENST00000492407 C12orf77C9JDV5 145 aa7.13□□□□□ -1.27
HDAC3-212ENST00000492407 PTGES3LE9PB15 166 aa7.13□□□□□ -1.27
HDAC3-212ENST00000492407 ARPC5O15511 151 aa7.13□□□□□ -1.27
HDAC3-212ENST00000492407 SNAPC5O75971 98 aa7.13□□□□□ -1.27
HDAC3-212ENST00000492407 DFFBO76075 338 aa7.13□□□□□ -1.27
HDAC3-212ENST00000492407 CD1AP06126 327 aa7.13□□□□□ -1.27
HDAC3-212ENST00000492407 SCGB1A1P11684 91 aa7.13□□□□□ -1.27
HDAC3-212ENST00000492407 SERPINA2P20848 420 aa7.13□□□□□ -1.27
HDAC3-212ENST00000492407 PPIFP30405 207 aaKnown RBP7.13□□□□□ -1.27
HDAC3-212ENST00000492407 REG1BP48304 166 aa7.13□□□□□ -1.27
HDAC3-212ENST00000492407 ZNF134P52741 427 aa7.13□□□□□ -1.27
HDAC3-212ENST00000492407 RAB25P57735 213 aa7.13□□□□□ -1.27
HDAC3-212ENST00000492407 HAGHQ16775 308 aa7.13□□□□□ -1.27
HDAC3-212ENST00000492407 Q499Y3 187 aa7.13□□□□□ -1.27
HDAC3-212ENST00000492407 CT45A1Q5HYN5 189 aa7.13□□□□□ -1.27
HDAC3-212ENST00000492407 SYT6Q5T7P8 510 aaPredicted RBP7.13□□□□□ -1.27
HDAC3-212ENST00000492407 ZNF429Q86V71 674 aa7.13□□□□□ -1.27
HDAC3-212ENST00000492407 ARRDC1Q8N5I2 433 aa7.13□□□□□ -1.27
HDAC3-212ENST00000492407 C12orf45Q8N5I9 185 aaPredicted RBP7.13□□□□□ -1.27
HDAC3-212ENST00000492407 ZNF555Q8NEP9 628 aa7.13□□□□□ -1.27
HDAC3-212ENST00000492407 TSPAN14Q8NG11 270 aa7.13□□□□□ -1.27
HDAC3-212ENST00000492407 CT45A3Q8NHU0 189 aa7.13□□□□□ -1.27
HDAC3-212ENST00000492407 APH1BQ8WW43 257 aa7.13□□□□□ -1.27
HDAC3-212ENST00000492407 RBPMSQ93062 196 aaKnown RBP7.13□□□□□ -1.27
HDAC3-212ENST00000492407 KCTD7Q96MP8 289 aa7.13□□□□□ -1.27
HDAC3-212ENST00000492407 MBNL3Q9NUK0 354 aaKnown RBP7.13□□□□□ -1.27
HDAC3-212ENST00000492407 GNG12Q9UBI6 72 aa7.13□□□□□ -1.27
HDAC3-212ENST00000492407 GHRLQ9UBU3 117 aa7.13□□□□□ -1.27
HDAC3-212ENST00000492407 ZNF107Q9UII5 783 aaPredicted RBP7.13□□□□□ -1.27
HDAC3-212ENST00000492407 SCP2D1Q9UJQ7 156 aa7.13□□□□□ -1.27
HDAC3-212ENST00000492407 VSIG4Q9Y279 399 aa7.13□□□□□ -1.27
HDAC3-212ENST00000492407 ZNF256Q9Y2P7 627 aaPredicted RBP7.13□□□□□ -1.27
HDAC3-212ENST00000492407 EXOSC1Q9Y3B2 195 aaKnown RBP7.13□□□□□ -1.27
HDAC3-212ENST00000492407 KIAA2026Q5HYC2 2103 aa7.12□□□□□ -1.27
HDAC3-212ENST00000492407 A0A087WXM4 84 aa7.12□□□□□ -1.27
HDAC3-212ENST00000492407 ARPC1BO15143 372 aaKnown RBP7.12□□□□□ -1.27
HDAC3-212ENST00000492407 RGS11O94810 467 aa7.12□□□□□ -1.27
HDAC3-212ENST00000492407 IGLV1-40P01703 118 aa7.12□□□□□ -1.27
HDAC3-212ENST00000492407 HLA-DRB1P01911 266 aa7.12□□□□□ -1.27
HDAC3-212ENST00000492407 HBZP02008 142 aa7.12□□□□□ -1.27
HDAC3-212ENST00000492407 MYL12AP19105 171 aa7.12□□□□□ -1.27
HDAC3-212ENST00000492407 FUT3P21217 361 aa7.12□□□□□ -1.27
HDAC3-212ENST00000492407 ECI1P42126 302 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms