RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	CROCCP3	Q8IVE0	287 aa		11.81	□□□□□ -0.52
MRPL55-231	ENST00000492170	GRPEL2	Q8TAA5	225 aa		11.81	□□□□□ -0.52
MRPL55-231	ENST00000492170	RHOV	Q96L33	236 aa		11.81	□□□□□ -0.52
MRPL55-231	ENST00000492170	CMSS1	Q9BQ75	279 aa	Known RBP	11.81	□□□□□ -0.52
MRPL55-231	ENST00000492170	ELOVL1	Q9BW60	279 aa		11.81	□□□□□ -0.52
MRPL55-231	ENST00000492170	ZMAT4	Q9H898	229 aa		11.81	□□□□□ -0.52
MRPL55-231	ENST00000492170	ETV7	Q9Y603	341 aa		11.81	□□□□□ -0.52
MRPL55-231	ENST00000492170	FXYD3	Q14802	87 aa		11.8	□□□□□ -0.52
MRPL55-231	ENST00000492170	IDNK	Q5T6J7	187 aa		11.8	□□□□□ -0.52
MRPL55-231	ENST00000492170	ZNF383	Q8NA42	475 aa		11.8	□□□□□ -0.52
MRPL55-231	ENST00000492170	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	11.8	□□□□□ -0.52
MRPL55-231	ENST00000492170	OR5H6	Q8NGV6	325 aa		11.8	□□□□□ -0.52
MRPL55-231	ENST00000492170	SLC25A38	Q96DW6	304 aa		11.8	□□□□□ -0.52
MRPL55-231	ENST00000492170	ATG5	Q9H1Y0	275 aa		11.8	□□□□□ -0.52
MRPL55-231	ENST00000492170	ZNF355P	Q9NSJ1	428 aa		11.8	□□□□□ -0.52
MRPL55-231	ENST00000492170	C13orf42	A0A1B0GVH6	325 aa		11.79	□□□□□ -0.52
MRPL55-231	ENST00000492170	TRDC	B7Z8K6	153 aa		11.79	□□□□□ -0.52
MRPL55-231	ENST00000492170		H3BUA1	57 aa		11.79	□□□□□ -0.52
MRPL55-231	ENST00000492170		M0R1X1	148 aa		11.79	□□□□□ -0.52
MRPL55-231	ENST00000492170	SLC25A17	O43808	307 aa		11.79	□□□□□ -0.52
MRPL55-231	ENST00000492170	PROP1	O75360	226 aa		11.79	□□□□□ -0.52
MRPL55-231	ENST00000492170	SCGN	O76038	276 aa		11.79	□□□□□ -0.52
MRPL55-231	ENST00000492170	GNB3	P16520	340 aa		11.79	□□□□□ -0.52
MRPL55-231	ENST00000492170	ZP3	P21754	424 aa		11.79	□□□□□ -0.52
MRPL55-231	ENST00000492170	SERPINB10	P48595	397 aa		11.79	□□□□□ -0.52
MRPL55-231	ENST00000492170	NCS1	P62166	190 aa		11.79	□□□□□ -0.52
MRPL55-231	ENST00000492170	MRPS15	P82914	257 aa	Known RBP	11.79	□□□□□ -0.52
MRPL55-231	ENST00000492170	ARL6IP1	Q15041	203 aa		11.79	□□□□□ -0.52
MRPL55-231	ENST00000492170	CTF1	Q16619	201 aa		11.79	□□□□□ -0.52
MRPL55-231	ENST00000492170	SRSF7	Q16629	238 aa	Known RBP eCLIP	11.79	□□□□□ -0.52
MRPL55-231	ENST00000492170	POC5	Q8NA72	575 aa		11.79	□□□□□ -0.52
MRPL55-231	ENST00000492170	SLC25A46	Q96AG3	418 aa		11.79	□□□□□ -0.52
MRPL55-231	ENST00000492170	RSRP1	Q9BUV0	290 aa		11.79	□□□□□ -0.52
MRPL55-231	ENST00000492170	NAA50	Q9GZZ1	169 aa	Known RBP	11.79	□□□□□ -0.52
MRPL55-231	ENST00000492170	RANGRF	Q9HD47	186 aa	Predicted RBP	11.79	□□□□□ -0.52
MRPL55-231	ENST00000492170	SLC35D1	Q9NTN3	355 aa		11.79	□□□□□ -0.52
MRPL55-231	ENST00000492170	RHBDL2	Q9NX52	303 aa		11.79	□□□□□ -0.52
MRPL55-231	ENST00000492170	RDH8	Q9NYR8	311 aa		11.79	□□□□□ -0.52
MRPL55-231	ENST00000492170	SPATA2	Q9UM82	520 aa		11.79	□□□□□ -0.52
MRPL55-231	ENST00000492170	DYNC2H1	Q8NCM8	4307 aa	Known RBP	11.78	□□□□□ -0.52
MRPL55-231	ENST00000492170	IGKV1-6	A0A0C4DH72	117 aa		11.78	□□□□□ -0.52
MRPL55-231	ENST00000492170		A0A0G2JLM5	398 aa		11.78	□□□□□ -0.52
MRPL55-231	ENST00000492170	CNIH1	O95406	144 aa		11.78	□□□□□ -0.52
MRPL55-231	ENST00000492170	FCGR3A	P08637	254 aa		11.78	□□□□□ -0.52
MRPL55-231	ENST00000492170	LINC00205	P59089	165 aa		11.78	□□□□□ -0.52
MRPL55-231	ENST00000492170	VBP1	P61758	197 aa		11.78	□□□□□ -0.52
MRPL55-231	ENST00000492170	CASC10	Q5T4H9	136 aa		11.78	□□□□□ -0.52
MRPL55-231	ENST00000492170	OR4A4P	Q8NGN8	299 aa		11.78	□□□□□ -0.52
MRPL55-231	ENST00000492170	RYR2	Q92736	4967 aa		11.77	□□□□□ -0.52
MRPL55-231	ENST00000492170		A0A0A6YYH2	397 aa		11.77	□□□□□ -0.53
MRPL55-231	ENST00000492170		A6NJ64	397 aa		11.77	□□□□□ -0.53
MRPL55-231	ENST00000492170	CD3G	P09693	182 aa		11.77	□□□□□ -0.53
MRPL55-231	ENST00000492170	CBX3	Q13185	183 aa		11.77	□□□□□ -0.53
MRPL55-231	ENST00000492170	GPR141	Q7Z602	305 aa		11.77	□□□□□ -0.53
MRPL55-231	ENST00000492170	HAPLN4	Q86UW8	402 aa		11.77	□□□□□ -0.53
MRPL55-231	ENST00000492170	HARBI1	Q96MB7	349 aa		11.77	□□□□□ -0.53
MRPL55-231	ENST00000492170	TMEM68	Q96MH6	324 aa		11.77	□□□□□ -0.53
MRPL55-231	ENST00000492170	OR2D2	Q9H210	308 aa		11.77	□□□□□ -0.53
MRPL55-231	ENST00000492170	BET1	O15155	118 aa		11.76	□□□□□ -0.53
MRPL55-231	ENST00000492170	FABP7	O15540	132 aa		11.76	□□□□□ -0.53
MRPL55-231	ENST00000492170	IGLV1-51	P01701	117 aa		11.76	□□□□□ -0.53
MRPL55-231	ENST00000492170	IGHV4-30-4	P0DP06	118 aa		11.76	□□□□□ -0.53
MRPL55-231	ENST00000492170	LYL1	P12980	280 aa		11.76	□□□□□ -0.53
MRPL55-231	ENST00000492170	LGALS7	P47929	136 aa		11.76	□□□□□ -0.53
MRPL55-231	ENST00000492170	GPR107	Q5VW38	600 aa		11.76	□□□□□ -0.53
MRPL55-231	ENST00000492170		Q6ZS49	121 aa		11.76	□□□□□ -0.53
MRPL55-231	ENST00000492170	SGPP2	Q8IWX5	399 aa		11.76	□□□□□ -0.53
MRPL55-231	ENST00000492170	OR5T1	Q8NG75	326 aa		11.76	□□□□□ -0.53
MRPL55-231	ENST00000492170	KCTD12	Q96CX2	325 aa	Known RBP	11.76	□□□□□ -0.53
MRPL55-231	ENST00000492170	CABLES2	Q9BTV7	478 aa		11.76	□□□□□ -0.53
MRPL55-231	ENST00000492170	PALMD	Q9NP74	551 aa		11.76	□□□□□ -0.53
MRPL55-231	ENST00000492170	ELF5	Q9UKW6	265 aa	Predicted RBP	11.76	□□□□□ -0.53
MRPL55-231	ENST00000492170		A0A075B6Q4	140 aa		11.75	□□□□□ -0.53
MRPL55-231	ENST00000492170	ANKRD34B	A5PLL1	514 aa		11.75	□□□□□ -0.53
MRPL55-231	ENST00000492170	DIRAS3	O95661	229 aa		11.75	□□□□□ -0.53
MRPL55-231	ENST00000492170	IGLV2-23	P01705	113 aa		11.75	□□□□□ -0.53
MRPL55-231	ENST00000492170	DTYMK	P23919	212 aa		11.75	□□□□□ -0.53
MRPL55-231	ENST00000492170	TAGLN	Q01995	201 aa	Known RBP	11.75	□□□□□ -0.53
MRPL55-231	ENST00000492170	RTL8B	Q17RB0	113 aa		11.75	□□□□□ -0.53
MRPL55-231	ENST00000492170	CDNF	Q49AH0	187 aa		11.75	□□□□□ -0.53
MRPL55-231	ENST00000492170	HACD4	Q5VWC8	232 aa		11.75	□□□□□ -0.53
MRPL55-231	ENST00000492170	OR10J5	Q8NHC4	309 aa		11.75	□□□□□ -0.53
MRPL55-231	ENST00000492170	SDHAF2	Q9NX18	166 aa		11.75	□□□□□ -0.53
MRPL55-231	ENST00000492170	SACS	Q9NZJ4	4579 aa		11.75	□□□□□ -0.53
MRPL55-231	ENST00000492170	SHOX	O15266	292 aa		11.74	□□□□□ -0.53
MRPL55-231	ENST00000492170	AADAC	P22760	399 aa		11.74	□□□□□ -0.53
MRPL55-231	ENST00000492170	RPL5	P46777	297 aa	Known RBP	11.74	□□□□□ -0.53
MRPL55-231	ENST00000492170	SSBP2	P81877	361 aa	Predicted RBP	11.74	□□□□□ -0.53
MRPL55-231	ENST00000492170	PJVK	Q0ZLH3	352 aa		11.74	□□□□□ -0.53
MRPL55-231	ENST00000492170	ARFRP1	Q13795	201 aa		11.74	□□□□□ -0.53
MRPL55-231	ENST00000492170	CITED4	Q96RK1	184 aa		11.74	□□□□□ -0.53
MRPL55-231	ENST00000492170	TM2D3	Q9BRN9	247 aa		11.74	□□□□□ -0.53
MRPL55-231	ENST00000492170	RBM7	Q9Y580	266 aa	Known RBP	11.74	□□□□□ -0.53
MRPL55-231	ENST00000492170	TRBV6-7	A0A0A0MS04	114 aa		11.73	□□□□□ -0.53
MRPL55-231	ENST00000492170	TMEM235	A6NFC5	223 aa		11.73	□□□□□ -0.53
MRPL55-231	ENST00000492170		A8MZ25	164 aa		11.73	□□□□□ -0.53
MRPL55-231	ENST00000492170		H0Y980	276 aa		11.73	□□□□□ -0.53
MRPL55-231	ENST00000492170	BRI3	O95415	125 aa		11.73	□□□□□ -0.53
MRPL55-231	ENST00000492170	CRYGB	P07316	175 aa		11.73	□□□□□ -0.53
MRPL55-231	ENST00000492170	RRAS	P10301	218 aa		11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms