RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 CCDC90BQ9GZT6 254 aa6.41□□□□□ -1.38
SMARCB1-207ENST00000491967 OR2D2Q9H210 308 aa6.41□□□□□ -1.38
SMARCB1-207ENST00000491967 DCSTAMPQ9H295 470 aa6.41□□□□□ -1.38
SMARCB1-207ENST00000491967 VCX3BQ9H321 246 aa6.41□□□□□ -1.38
SMARCB1-207ENST00000491967 RANGRFQ9HD47 186 aaPredicted RBP6.41□□□□□ -1.38
SMARCB1-207ENST00000491967 C19orf73Q9NVV2 129 aa6.41□□□□□ -1.38
SMARCB1-207ENST00000491967 SIGLEC8Q9NYZ4 499 aa6.41□□□□□ -1.38
SMARCB1-207ENST00000491967 ZNF230Q9UIE0 474 aaPredicted RBP6.41□□□□□ -1.38
SMARCB1-207ENST00000491967 KLK9Q9UKQ9 250 aa6.41□□□□□ -1.38
SMARCB1-207ENST00000491967 BLOC1S6Q9UL45 172 aa6.41□□□□□ -1.38
SMARCB1-207ENST00000491967 RAB26Q9ULW5 256 aa6.41□□□□□ -1.38
SMARCB1-207ENST00000491967 A3GALT2U3KPV4 340 aa6.41□□□□□ -1.38
SMARCB1-207ENST00000491967 TRBV9A0A0B4J1U6 114 aa6.4□□□□□ -1.38
SMARCB1-207ENST00000491967 A0A0B4J203 849 aa6.4□□□□□ -1.38
SMARCB1-207ENST00000491967 METTL21EPA6NDL7 271 aa6.4□□□□□ -1.38
SMARCB1-207ENST00000491967 LINC00473A8K010 186 aa6.4□□□□□ -1.38
SMARCB1-207ENST00000491967 BET1O15155 118 aa6.4□□□□□ -1.38
SMARCB1-207ENST00000491967 RBMXL2O75526 392 aaKnown RBP6.4□□□□□ -1.38
SMARCB1-207ENST00000491967 IGHV3-11P01762 117 aa6.4□□□□□ -1.38
SMARCB1-207ENST00000491967 TRGV3P03979 118 aa6.4□□□□□ -1.38
SMARCB1-207ENST00000491967 FRMD6-AS1P0C7T7 363 aa6.4□□□□□ -1.38
SMARCB1-207ENST00000491967 RAB3BP20337 219 aa6.4□□□□□ -1.38
SMARCB1-207ENST00000491967 GADD45AP24522 165 aa6.4□□□□□ -1.38
SMARCB1-207ENST00000491967 GABARAPL2P60520 117 aa6.4□□□□□ -1.38
SMARCB1-207ENST00000491967 DYRK1AQ13627 763 aa6.4□□□□□ -1.38
SMARCB1-207ENST00000491967 PRSS8Q16651 343 aa6.4□□□□□ -1.38
SMARCB1-207ENST00000491967 HACD4Q5VWC8 232 aa6.4□□□□□ -1.38
SMARCB1-207ENST00000491967 OVCH2Q7RTZ1 564 aa6.4□□□□□ -1.38
SMARCB1-207ENST00000491967 TPRA1Q86W33 373 aa6.4□□□□□ -1.38
SMARCB1-207ENST00000491967 SPARTQ8N0X7 666 aa6.4□□□□□ -1.38
SMARCB1-207ENST00000491967 ADAD2Q8NCV1 583 aaKnown RBP6.4□□□□□ -1.38
SMARCB1-207ENST00000491967 BVESQ8NE79 360 aa6.4□□□□□ -1.38
SMARCB1-207ENST00000491967 OR5T1Q8NG75 326 aa6.4□□□□□ -1.38
SMARCB1-207ENST00000491967 GRPEL2Q8TAA5 225 aa6.4□□□□□ -1.38
SMARCB1-207ENST00000491967 OSR1Q8TAX0 266 aaPredicted RBP6.4□□□□□ -1.38
SMARCB1-207ENST00000491967 OR4C12Q96R67 309 aa6.4□□□□□ -1.38
SMARCB1-207ENST00000491967 ASCL2Q99929 193 aa6.4□□□□□ -1.38
SMARCB1-207ENST00000491967 TM2D3Q9BRN9 247 aa6.4□□□□□ -1.38
SMARCB1-207ENST00000491967 ELF5Q9UKW6 265 aaPredicted RBP6.4□□□□□ -1.38
SMARCB1-207ENST00000491967 TENM2Q9NT68 2774 aa6.4□□□□□ -1.39
SMARCB1-207ENST00000491967 MSGN1A6NI15 193 aa6.39□□□□□ -1.39
SMARCB1-207ENST00000491967 TRIM64CA6NLI5 447 aa6.39□□□□□ -1.39
SMARCB1-207ENST00000491967 NOTOA8MTQ0 251 aa6.39□□□□□ -1.39
SMARCB1-207ENST00000491967 SHOXO15266 292 aa6.39□□□□□ -1.39
SMARCB1-207ENST00000491967 TUSC2O75896 110 aa6.39□□□□□ -1.39
SMARCB1-207ENST00000491967 CNIH1O95406 144 aa6.39□□□□□ -1.39
SMARCB1-207ENST00000491967 HLA-DQB1P01920 261 aa6.39□□□□□ -1.39
SMARCB1-207ENST00000491967 CTXN2P0C2S0 81 aa6.39□□□□□ -1.39
SMARCB1-207ENST00000491967 AADACP22760 399 aa6.39□□□□□ -1.39
SMARCB1-207ENST00000491967 MYL9P24844 172 aa6.39□□□□□ -1.39
SMARCB1-207ENST00000491967 BRWD1-AS2P59051 145 aa6.39□□□□□ -1.39
SMARCB1-207ENST00000491967 MRPS15P82914 257 aaKnown RBP6.39□□□□□ -1.39
SMARCB1-207ENST00000491967 PITPNAQ00169 270 aa6.39□□□□□ -1.39
SMARCB1-207ENST00000491967 RTL8BQ17RB0 113 aa6.39□□□□□ -1.39
SMARCB1-207ENST00000491967 CDNFQ49AH0 187 aa6.39□□□□□ -1.39
SMARCB1-207ENST00000491967 C22orf42Q6IC83 251 aa6.39□□□□□ -1.39
SMARCB1-207ENST00000491967 ABHD5Q8WTS1 349 aa6.39□□□□□ -1.39
SMARCB1-207ENST00000491967 CNBD2Q96M20 576 aa6.39□□□□□ -1.39
SMARCB1-207ENST00000491967 HARBI1Q96MB7 349 aa6.39□□□□□ -1.39
SMARCB1-207ENST00000491967 ELOVL1Q9BW60 279 aa6.39□□□□□ -1.39
SMARCB1-207ENST00000491967 YTHDF1Q9BYJ9 559 aaKnown RBP6.39□□□□□ -1.39
SMARCB1-207ENST00000491967 TXNL4BQ9NX01 149 aaKnown RBP6.39□□□□□ -1.39
SMARCB1-207ENST00000491967 STUB1Q9UNE7 303 aa6.39□□□□□ -1.39
SMARCB1-207ENST00000491967 OR2W1Q9Y3N9 320 aa6.39□□□□□ -1.39
SMARCB1-207ENST00000491967 DMRT1Q9Y5R6 373 aa6.39□□□□□ -1.39
SMARCB1-207ENST00000491967 C13orf42A0A1B0GVH6 325 aa6.38□□□□□ -1.39
SMARCB1-207ENST00000491967 SSX5O60225 188 aa6.38□□□□□ -1.39
SMARCB1-207ENST00000491967 SLC22A5O76082 557 aa6.38□□□□□ -1.39
SMARCB1-207ENST00000491967 TRBV12-3P01733 135 aa6.38□□□□□ -1.39
SMARCB1-207ENST00000491967 CSN3P07498 182 aa6.38□□□□□ -1.39
SMARCB1-207ENST00000491967 OR9G9P0C7N8 305 aa6.38□□□□□ -1.39
SMARCB1-207ENST00000491967 IGHV4-30-4P0DP06 118 aa6.38□□□□□ -1.39
SMARCB1-207ENST00000491967 SCAND1P57086 179 aa6.38□□□□□ -1.39
SMARCB1-207ENST00000491967 ZNF45Q02386 682 aa6.38□□□□□ -1.39
SMARCB1-207ENST00000491967 MSMO1Q15800 293 aa6.38□□□□□ -1.39
SMARCB1-207ENST00000491967 VMA21Q3ZAQ7 101 aa6.38□□□□□ -1.39
SMARCB1-207ENST00000491967 CASC10Q5T4H9 136 aa6.38□□□□□ -1.39
SMARCB1-207ENST00000491967 CNIH2Q6PI25 160 aa6.38□□□□□ -1.39
SMARCB1-207ENST00000491967 TTC9CQ8N5M4 171 aa6.38□□□□□ -1.39
SMARCB1-207ENST00000491967 ZNF645Q8N7E2 425 aa6.38□□□□□ -1.39
SMARCB1-207ENST00000491967 OR9G4Q8NGQ1 327 aa6.38□□□□□ -1.39
SMARCB1-207ENST00000491967 MUC7Q8TAX7 377 aa6.38□□□□□ -1.39
SMARCB1-207ENST00000491967 SRSF12Q8WXF0 261 aaKnown RBP6.38□□□□□ -1.39
SMARCB1-207ENST00000491967 MAFIPQ8WZ33 124 aa6.38□□□□□ -1.39
SMARCB1-207ENST00000491967 FCGR1BQ92637 280 aa6.38□□□□□ -1.39
SMARCB1-207ENST00000491967 RCHY1Q96PM5 261 aa6.38□□□□□ -1.39
SMARCB1-207ENST00000491967 CITED4Q96RK1 184 aa6.38□□□□□ -1.39
SMARCB1-207ENST00000491967 GINS4Q9BRT9 223 aa6.38□□□□□ -1.39
SMARCB1-207ENST00000491967 KRTAP17-1Q9BYP8 105 aa6.38□□□□□ -1.39
SMARCB1-207ENST00000491967 PEF1Q9UBV8 284 aaKnown RBP6.38□□□□□ -1.39
SMARCB1-207ENST00000491967 DNAH7Q8WXX0 4024 aa6.37□□□□□ -1.39
SMARCB1-207ENST00000491967 IGKV1D-13A0A0B4J2D9 117 aa6.37□□□□□ -1.39
SMARCB1-207ENST00000491967 FAM223BA6NKX1 122 aa6.37□□□□□ -1.39
SMARCB1-207ENST00000491967 SCGNO76038 276 aa6.37□□□□□ -1.39
SMARCB1-207ENST00000491967 OR2A4O95047 310 aa6.37□□□□□ -1.39
SMARCB1-207ENST00000491967 LY86O95711 162 aa6.37□□□□□ -1.39
SMARCB1-207ENST00000491967 CRYZL1O95825 349 aa6.37□□□□□ -1.39
SMARCB1-207ENST00000491967 SAA1P0DJI8 122 aaPredicted RBP6.37□□□□□ -1.39
SMARCB1-207ENST00000491967 IGKV1-13P0DP09 117 aa6.37□□□□□ -1.39
SMARCB1-207ENST00000491967 TALDO1P37837 337 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms