RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 AP3S2P59780 193 aa11.91□□□□□ -0.5
CDC42SE1-205ENST00000491825 AADACL3Q5VUY0 350 aa11.91□□□□□ -0.5
CDC42SE1-205ENST00000491825 GLDNQ6ZMI3 551 aaPredicted RBP11.91□□□□□ -0.5
CDC42SE1-205ENST00000491825 ZNF66Q6ZN08 573 aa11.91□□□□□ -0.5
CDC42SE1-205ENST00000491825 Q6ZS46 218 aa11.91□□□□□ -0.5
CDC42SE1-205ENST00000491825 DRAXINQ8NBI3 349 aaPredicted RBP11.91□□□□□ -0.5
CDC42SE1-205ENST00000491825 BVESQ8NE79 360 aa11.91□□□□□ -0.5
CDC42SE1-205ENST00000491825 OR4D10Q8NGI6 311 aa11.91□□□□□ -0.5
CDC42SE1-205ENST00000491825 SLC5A7Q9GZV3 580 aa11.91□□□□□ -0.5
CDC42SE1-205ENST00000491825 SLC2A8Q9NY64 477 aa11.91□□□□□ -0.5
CDC42SE1-205ENST00000491825 LINC00473A8K010 186 aa11.9□□□□□ -0.5
CDC42SE1-205ENST00000491825 J3QRK9 145 aa11.9□□□□□ -0.5
CDC42SE1-205ENST00000491825 FBXO24O75426 580 aa11.9□□□□□ -0.5
CDC42SE1-205ENST00000491825 GNRHRP30968 328 aa11.9□□□□□ -0.5
CDC42SE1-205ENST00000491825 KLF9Q13886 244 aaPredicted RBP11.9□□□□□ -0.5
CDC42SE1-205ENST00000491825 LPCAT3Q6P1A2 487 aa11.9□□□□□ -0.5
CDC42SE1-205ENST00000491825 ZNF818PQ6ZRF7 136 aa11.9□□□□□ -0.5
CDC42SE1-205ENST00000491825 KCTD9Q7L273 389 aa11.9□□□□□ -0.5
CDC42SE1-205ENST00000491825 C5orf56Q8N8D9 126 aa11.9□□□□□ -0.5
CDC42SE1-205ENST00000491825 OR4C16Q8NGL9 310 aa11.9□□□□□ -0.5
CDC42SE1-205ENST00000491825 SDHCQ99643 169 aaPredicted RBP11.9□□□□□ -0.5
CDC42SE1-205ENST00000491825 RNF5Q99942 180 aa11.9□□□□□ -0.5
CDC42SE1-205ENST00000491825 CCL28Q9NRJ3 127 aa11.9□□□□□ -0.5
CDC42SE1-205ENST00000491825 PRB2P02812 416 aaPredicted RBP11.89□□□□□ -0.51
CDC42SE1-205ENST00000491825 IGKV1-16P04430 117 aa11.89□□□□□ -0.51
CDC42SE1-205ENST00000491825 AMY1AP04745 511 aa11.89□□□□□ -0.51
CDC42SE1-205ENST00000491825 AMY2AP04746 511 aa11.89□□□□□ -0.51
CDC42SE1-205ENST00000491825 ZNF735P0CB33 412 aa11.89□□□□□ -0.51
CDC42SE1-205ENST00000491825 RRASP10301 218 aa11.89□□□□□ -0.51
CDC42SE1-205ENST00000491825 FAUP35544 74 aaKnown RBP11.89□□□□□ -0.51
CDC42SE1-205ENST00000491825 ECI1P42126 302 aa11.89□□□□□ -0.51
CDC42SE1-205ENST00000491825 LINC00205P59089 165 aa11.89□□□□□ -0.51
CDC42SE1-205ENST00000491825 RTL8BQ17RB0 113 aa11.89□□□□□ -0.51
CDC42SE1-205ENST00000491825 NDUFA11Q86Y39 141 aa11.89□□□□□ -0.51
CDC42SE1-205ENST00000491825 SLC38A6Q8IZM9 456 aa11.89□□□□□ -0.51
CDC42SE1-205ENST00000491825 TOMM5Q8N4H5 51 aa11.89□□□□□ -0.51
CDC42SE1-205ENST00000491825 FAM71E2Q8N5Q1 922 aa11.89□□□□□ -0.51
CDC42SE1-205ENST00000491825 NPBQ8NG41 125 aa11.89□□□□□ -0.51
CDC42SE1-205ENST00000491825 S100ZQ8WXG8 99 aa11.89□□□□□ -0.51
CDC42SE1-205ENST00000491825 PRRT1Q99946 306 aa11.89□□□□□ -0.51
CDC42SE1-205ENST00000491825 CITED2Q99967 270 aaPredicted RBP11.89□□□□□ -0.51
CDC42SE1-205ENST00000491825 PLSCR3Q9NRY6 295 aa11.89□□□□□ -0.51
CDC42SE1-205ENST00000491825 SLC35D1Q9NTN3 355 aa11.89□□□□□ -0.51
CDC42SE1-205ENST00000491825 DISC1C4P0D8 188 aa11.88□□□□□ -0.51
CDC42SE1-205ENST00000491825 H7C2Y5 167 aa11.88□□□□□ -0.51
CDC42SE1-205ENST00000491825 GPR31O00270 319 aa11.88□□□□□ -0.51
CDC42SE1-205ENST00000491825 NDUFA3O95167 84 aa11.88□□□□□ -0.51
CDC42SE1-205ENST00000491825 SPDEFO95238 335 aa11.88□□□□□ -0.51
CDC42SE1-205ENST00000491825 RPL30P62888 115 aaKnown RBP11.88□□□□□ -0.51
CDC42SE1-205ENST00000491825 BLCAPP62952 87 aa11.88□□□□□ -0.51
CDC42SE1-205ENST00000491825 CBX3Q13185 183 aa11.88□□□□□ -0.51
CDC42SE1-205ENST00000491825 HNF4GQ14541 408 aa11.88□□□□□ -0.51
CDC42SE1-205ENST00000491825 MMDQ15546 238 aa11.88□□□□□ -0.51
CDC42SE1-205ENST00000491825 NSUN5P1Q3KNT7 163 aa11.88□□□□□ -0.51
CDC42SE1-205ENST00000491825 TMEM177Q53S58 311 aa11.88□□□□□ -0.51
CDC42SE1-205ENST00000491825 FAAP20Q6NZ36 180 aa11.88□□□□□ -0.51
CDC42SE1-205ENST00000491825 CMTM1Q8IZ96 169 aa11.88□□□□□ -0.51
CDC42SE1-205ENST00000491825 Q8N9W7 124 aa11.88□□□□□ -0.51
CDC42SE1-205ENST00000491825 TERB2Q8NHR7 220 aa11.88□□□□□ -0.51
CDC42SE1-205ENST00000491825 ZNF486Q96H40 463 aaPredicted RBP11.88□□□□□ -0.51
CDC42SE1-205ENST00000491825 RSRP1Q9BUV0 290 aa11.88□□□□□ -0.51
CDC42SE1-205ENST00000491825 CCDC32Q9BV29 185 aa11.88□□□□□ -0.51
CDC42SE1-205ENST00000491825 PRSS22Q9GZN4 317 aa11.88□□□□□ -0.51
CDC42SE1-205ENST00000491825 LIN7CQ9NUP9 197 aaKnown RBP11.88□□□□□ -0.51
CDC42SE1-205ENST00000491825 PRELID3BQ9Y3B1 194 aa11.88□□□□□ -0.51
CDC42SE1-205ENST00000491825 NBR2O15453 112 aa11.87□□□□□ -0.51
CDC42SE1-205ENST00000491825 KIR2DS2P43631 304 aa11.87□□□□□ -0.51
CDC42SE1-205ENST00000491825 CATR1Q13166 79 aa11.87□□□□□ -0.51
CDC42SE1-205ENST00000491825 SURF2Q15527 256 aaPredicted RBP11.87□□□□□ -0.51
CDC42SE1-205ENST00000491825 BAK1Q16611 211 aa11.87□□□□□ -0.51
CDC42SE1-205ENST00000491825 TMEM95Q3KNT9 176 aa11.87□□□□□ -0.51
CDC42SE1-205ENST00000491825 OXLD1Q5BKU9 147 aa11.87□□□□□ -0.51
CDC42SE1-205ENST00000491825 TRIQKQ629K1 86 aa11.87□□□□□ -0.51
CDC42SE1-205ENST00000491825 REC114Q7Z4M0 266 aa11.87□□□□□ -0.51
CDC42SE1-205ENST00000491825 MRGPRFQ96AM1 343 aa11.87□□□□□ -0.51
CDC42SE1-205ENST00000491825 FLYWCH2Q96CP2 140 aaKnown RBP11.87□□□□□ -0.51
CDC42SE1-205ENST00000491825 NOTCH3Q9UM47 2321 aa11.87□□□□□ -0.51
CDC42SE1-205ENST00000491825 NCBP2LA6PVI3 153 aaKnown RBP11.86□□□□□ -0.51
CDC42SE1-205ENST00000491825 RBFOX2O43251 390 aaKnown RBP eCLIP11.86□□□□□ -0.51
CDC42SE1-205ENST00000491825 TNFSF12O43508 249 aa11.86□□□□□ -0.51
CDC42SE1-205ENST00000491825 IL7P13232 177 aa11.86□□□□□ -0.51
CDC42SE1-205ENST00000491825 CD40LGP29965 261 aa11.86□□□□□ -0.51
CDC42SE1-205ENST00000491825 LGALS7P47929 136 aa11.86□□□□□ -0.51
CDC42SE1-205ENST00000491825 F2RL1P55085 397 aa11.86□□□□□ -0.51
CDC42SE1-205ENST00000491825 SCGB2B2Q4G0G5 96 aa11.86□□□□□ -0.51
CDC42SE1-205ENST00000491825 OR51S1Q8NGJ8 323 aa11.86□□□□□ -0.51
CDC42SE1-205ENST00000491825 OR4S2Q8NH73 311 aa11.86□□□□□ -0.51
CDC42SE1-205ENST00000491825 OSR1Q8TAX0 266 aaPredicted RBP11.86□□□□□ -0.51
CDC42SE1-205ENST00000491825 TCTEX1D2Q8WW35 142 aa11.86□□□□□ -0.51
CDC42SE1-205ENST00000491825 R3HDM4Q96D70 268 aa11.86□□□□□ -0.51
CDC42SE1-205ENST00000491825 RITA1Q96K30 269 aa11.86□□□□□ -0.51
CDC42SE1-205ENST00000491825 TSNAXQ99598 290 aaKnown RBP11.86□□□□□ -0.51
CDC42SE1-205ENST00000491825 WDR12Q9GZL7 423 aaKnown RBP11.86□□□□□ -0.51
CDC42SE1-205ENST00000491825 HRASLSQ9HDD0 168 aa11.86□□□□□ -0.51
CDC42SE1-205ENST00000491825 KIAA1456Q9P272 454 aa11.86□□□□□ -0.51
CDC42SE1-205ENST00000491825 SCP2D1Q9UJQ7 156 aa11.86□□□□□ -0.51
CDC42SE1-205ENST00000491825 PLXNB1O43157 2135 aa11.86□□□□□ -0.51
CDC42SE1-205ENST00000491825 PGLYRP1O75594 196 aaPredicted RBP11.85□□□□□ -0.51
CDC42SE1-205ENST00000491825 S100GP29377 79 aa11.85□□□□□ -0.51
CDC42SE1-205ENST00000491825 PPP5CP53041 499 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms