RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 TRGV3P03979 118 aa6.39□□□□□ -1.39
LSM2-213ENST00000491421 LGALS7P47929 136 aa6.39□□□□□ -1.39
LSM2-213ENST00000491421 SLURP1P55000 103 aa6.39□□□□□ -1.39
LSM2-213ENST00000491421 TPPP2P59282 170 aa6.39□□□□□ -1.39
LSM2-213ENST00000491421 ARL6IP1Q15041 203 aa6.39□□□□□ -1.39
LSM2-213ENST00000491421 RTL8BQ17RB0 113 aa6.39□□□□□ -1.39
LSM2-213ENST00000491421 ZNF429Q86V71 674 aa6.39□□□□□ -1.39
LSM2-213ENST00000491421 SPARTQ8N0X7 666 aa6.39□□□□□ -1.39
LSM2-213ENST00000491421 FCGR1BQ92637 280 aa6.39□□□□□ -1.39
LSM2-213ENST00000491421 DLX4Q92988 240 aaPredicted RBP6.39□□□□□ -1.39
LSM2-213ENST00000491421 HARBI1Q96MB7 349 aa6.39□□□□□ -1.39
LSM2-213ENST00000491421 SLA2Q9H6Q3 261 aa6.39□□□□□ -1.39
LSM2-213ENST00000491421 ZNF355PQ9NSJ1 428 aa6.39□□□□□ -1.39
LSM2-213ENST00000491421 STUB1Q9UNE7 303 aa6.39□□□□□ -1.39
LSM2-213ENST00000491421 LSM4Q9Y4Z0 139 aaKnown RBP6.39□□□□□ -1.39
LSM2-213ENST00000491421 DNAH9Q9NYC9 4486 aa6.38□□□□□ -1.39
LSM2-213ENST00000491421 ARPC1BO15143 372 aaKnown RBP6.38□□□□□ -1.39
LSM2-213ENST00000491421 SHOXO15266 292 aa6.38□□□□□ -1.39
LSM2-213ENST00000491421 IGLV2-23P01705 113 aa6.38□□□□□ -1.39
LSM2-213ENST00000491421 HSPB1P04792 205 aaKnown RBP6.38□□□□□ -1.39
LSM2-213ENST00000491421 NHLRC4P0CG21 123 aaPredicted RBP6.38□□□□□ -1.39
LSM2-213ENST00000491421 RRASP10301 218 aa6.38□□□□□ -1.39
LSM2-213ENST00000491421 DTYMKP23919 212 aa6.38□□□□□ -1.39
LSM2-213ENST00000491421 FGF9P31371 208 aaPredicted RBP6.38□□□□□ -1.39
LSM2-213ENST00000491421 PJVKQ0ZLH3 352 aa6.38□□□□□ -1.39
LSM2-213ENST00000491421 SRSF7Q16629 238 aaKnown RBP eCLIP6.38□□□□□ -1.39
LSM2-213ENST00000491421 CDNFQ49AH0 187 aa6.38□□□□□ -1.39
LSM2-213ENST00000491421 TMEM177Q53S58 311 aa6.38□□□□□ -1.39
LSM2-213ENST00000491421 Q6ZS49 121 aa6.38□□□□□ -1.39
LSM2-213ENST00000491421 TPRA1Q86W33 373 aa6.38□□□□□ -1.39
LSM2-213ENST00000491421 H1FOOQ8IZA3 346 aaPredicted RBP6.38□□□□□ -1.39
LSM2-213ENST00000491421 POC5Q8NA72 575 aa6.38□□□□□ -1.39
LSM2-213ENST00000491421 BVESQ8NE79 360 aa6.38□□□□□ -1.39
LSM2-213ENST00000491421 C5orf30Q96GV9 206 aa6.38□□□□□ -1.39
LSM2-213ENST00000491421 ST6GALNAC5Q9BVH7 336 aa6.38□□□□□ -1.39
LSM2-213ENST00000491421 YTHDF1Q9BYJ9 559 aaKnown RBP6.38□□□□□ -1.39
LSM2-213ENST00000491421 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.38□□□□□ -1.39
LSM2-213ENST00000491421 TXNL4BQ9NX01 149 aaKnown RBP6.38□□□□□ -1.39
LSM2-213ENST00000491421 DAPK2Q9UIK4 370 aa6.38□□□□□ -1.39
LSM2-213ENST00000491421 ELF5Q9UKW6 265 aaPredicted RBP6.38□□□□□ -1.39
LSM2-213ENST00000491421 SSR3Q9UNL2 185 aa6.38□□□□□ -1.39
LSM2-213ENST00000491421 RABL2BQ9UNT1 228 aa6.38□□□□□ -1.39
LSM2-213ENST00000491421 KMT2CQ8NEZ4 4911 aaKnown RBP6.38□□□□□ -1.39
LSM2-213ENST00000491421 IGKV1D-8A0A087WSZ0 117 aa6.37□□□□□ -1.39
LSM2-213ENST00000491421 C13orf42A0A1B0GVH6 325 aa6.37□□□□□ -1.39
LSM2-213ENST00000491421 H3BUA1 57 aa6.37□□□□□ -1.39
LSM2-213ENST00000491421 SCGNO76038 276 aa6.37□□□□□ -1.39
LSM2-213ENST00000491421 CRYZL1O95825 349 aa6.37□□□□□ -1.39
LSM2-213ENST00000491421 CRYGBP07316 175 aa6.37□□□□□ -1.39
LSM2-213ENST00000491421 SSBP2P81877 361 aaPredicted RBP6.37□□□□□ -1.39
LSM2-213ENST00000491421 PITPNAQ00169 270 aa6.37□□□□□ -1.39
LSM2-213ENST00000491421 VMA21Q3ZAQ7 101 aa6.37□□□□□ -1.39
LSM2-213ENST00000491421 HACD4Q5VWC8 232 aa6.37□□□□□ -1.39
LSM2-213ENST00000491421 ZNF773Q6PK81 442 aa6.37□□□□□ -1.39
LSM2-213ENST00000491421 OR5T1Q8NG75 326 aa6.37□□□□□ -1.39
LSM2-213ENST00000491421 NUDCD2Q8WVJ2 157 aa6.37□□□□□ -1.39
LSM2-213ENST00000491421 ADTRPQ96IZ2 230 aa6.37□□□□□ -1.39
LSM2-213ENST00000491421 WWC2-AS2Q96NR7 200 aa6.37□□□□□ -1.39
LSM2-213ENST00000491421 RRP15Q9Y3B9 282 aaKnown RBP6.37□□□□□ -1.39
LSM2-213ENST00000491421 SMAD5-AS1Q9Y6J3 95 aa6.37□□□□□ -1.39
LSM2-213ENST00000491421 NBEAL2Q6ZNJ1 2754 aa6.37□□□□□ -1.39
LSM2-213ENST00000491421 A0A0G2JLM5 398 aa6.36□□□□□ -1.39
LSM2-213ENST00000491421 TMEM235A6NFC5 223 aa6.36□□□□□ -1.39
LSM2-213ENST00000491421 SRRM4A7MD48 611 aaKnown RBP6.36□□□□□ -1.39
LSM2-213ENST00000491421 LINC00473A8K010 186 aa6.36□□□□□ -1.39
LSM2-213ENST00000491421 J3QRK9 145 aa6.36□□□□□ -1.39
LSM2-213ENST00000491421 CTXN2P0C2S0 81 aa6.36□□□□□ -1.39
LSM2-213ENST00000491421 SPNP16150 400 aa6.36□□□□□ -1.39
LSM2-213ENST00000491421 DUTP33316 252 aaKnown RBP6.36□□□□□ -1.39
LSM2-213ENST00000491421 GNG2P59768 71 aa6.36□□□□□ -1.39
LSM2-213ENST00000491421 UBE2KP61086 200 aa6.36□□□□□ -1.39
LSM2-213ENST00000491421 MXD1Q05195 221 aa6.36□□□□□ -1.39
LSM2-213ENST00000491421 ACSM6Q6P461 480 aa6.36□□□□□ -1.39
LSM2-213ENST00000491421 SFXN4Q6P4A7 337 aa6.36□□□□□ -1.39
LSM2-213ENST00000491421 ZNF645Q8N7E2 425 aa6.36□□□□□ -1.39
LSM2-213ENST00000491421 TEX45Q8NA69 505 aa6.36□□□□□ -1.39
LSM2-213ENST00000491421 OR6Q1Q8NGQ2 317 aa6.36□□□□□ -1.39
LSM2-213ENST00000491421 OSR1Q8TAX0 266 aaPredicted RBP6.36□□□□□ -1.39
LSM2-213ENST00000491421 LGALS14Q8TCE9 139 aa6.36□□□□□ -1.39
LSM2-213ENST00000491421 DDB2Q92466 427 aa6.36□□□□□ -1.39
LSM2-213ENST00000491421 TMEM68Q96MH6 324 aa6.36□□□□□ -1.39
LSM2-213ENST00000491421 OR4C12Q96R67 309 aa6.36□□□□□ -1.39
LSM2-213ENST00000491421 PHB2Q99623 299 aa6.36□□□□□ -1.39
LSM2-213ENST00000491421 ASCL2Q99929 193 aa6.36□□□□□ -1.39
LSM2-213ENST00000491421 ELOVL1Q9BW60 279 aa6.36□□□□□ -1.39
LSM2-213ENST00000491421 WDR12Q9GZL7 423 aaKnown RBP6.36□□□□□ -1.39
LSM2-213ENST00000491421 OR51E2Q9H255 320 aa6.36□□□□□ -1.39
LSM2-213ENST00000491421 DCSTAMPQ9H295 470 aa6.36□□□□□ -1.39
LSM2-213ENST00000491421 RANGRFQ9HD47 186 aaPredicted RBP6.36□□□□□ -1.39
LSM2-213ENST00000491421 RHBDL2Q9NX52 303 aa6.36□□□□□ -1.39
LSM2-213ENST00000491421 COA4Q9NYJ1 87 aa6.36□□□□□ -1.39
LSM2-213ENST00000491421 OR2W1Q9Y3N9 320 aa6.36□□□□□ -1.39
LSM2-213ENST00000491421 U3KQK5 164 aa6.36□□□□□ -1.39
LSM2-213ENST00000491421 LOC100506127A0A0U1RQW1 187 aa6.35□□□□□ -1.39
LSM2-213ENST00000491421 ANKRD34BA5PLL1 514 aa6.35□□□□□ -1.39
LSM2-213ENST00000491421 MSGN1A6NI15 193 aa6.35□□□□□ -1.39
LSM2-213ENST00000491421 CREBL2O60519 120 aaPredicted RBP6.35□□□□□ -1.39
LSM2-213ENST00000491421 FCGR3BO75015 233 aa6.35□□□□□ -1.39
LSM2-213ENST00000491421 TUSC2O75896 110 aa6.35□□□□□ -1.39
LSM2-213ENST00000491421 SLC22A5O76082 557 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms