RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 DEFB136Q30KP8 78 aa11.83□□□□□ -0.52
COL27A1-206ENST00000490831 UBE2NLQ5JXB2 153 aa11.83□□□□□ -0.52
COL27A1-206ENST00000490831 PYHIN1Q6K0P9 492 aa11.83□□□□□ -0.52
COL27A1-206ENST00000490831 OVCH2Q7RTZ1 564 aa11.83□□□□□ -0.52
COL27A1-206ENST00000490831 GVQW1Q8N7I0 195 aa11.83□□□□□ -0.52
COL27A1-206ENST00000490831 OR5M8Q8NGP6 311 aa11.83□□□□□ -0.52
COL27A1-206ENST00000490831 S100A16Q96FQ6 103 aaKnown RBP11.83□□□□□ -0.52
COL27A1-206ENST00000490831 HARBI1Q96MB7 349 aa11.83□□□□□ -0.52
COL27A1-206ENST00000490831 DUX3Q96PT4 197 aa11.83□□□□□ -0.52
COL27A1-206ENST00000490831 CLCC1Q96S66 551 aa11.83□□□□□ -0.52
COL27A1-206ENST00000490831 VSIG4Q9Y279 399 aa11.83□□□□□ -0.52
COL27A1-206ENST00000490831 RBMX2Q9Y388 322 aaKnown RBP11.83□□□□□ -0.52
COL27A1-206ENST00000490831 A0A1W2PN81 502 aa11.82□□□□□ -0.52
COL27A1-206ENST00000490831 CHRNA7P36544 502 aa11.82□□□□□ -0.52
COL27A1-206ENST00000490831 CBX5P45973 191 aa11.82□□□□□ -0.52
COL27A1-206ENST00000490831 EIF4EBP1Q13541 118 aaPredicted RBP11.82□□□□□ -0.52
COL27A1-206ENST00000490831 FXYD3Q14802 87 aa11.82□□□□□ -0.52
COL27A1-206ENST00000490831 MSMO1Q15800 293 aa11.82□□□□□ -0.52
COL27A1-206ENST00000490831 MRGPRG-AS1Q2M3A8 158 aa11.82□□□□□ -0.52
COL27A1-206ENST00000490831 OSR1Q8TAX0 266 aaPredicted RBP11.82□□□□□ -0.52
COL27A1-206ENST00000490831 ARPC1AQ92747 370 aa11.82□□□□□ -0.52
COL27A1-206ENST00000490831 FAM103A1Q9BTL3 118 aaKnown RBP11.82□□□□□ -0.52
COL27A1-206ENST00000490831 GNB4Q9HAV0 340 aa11.82□□□□□ -0.52
COL27A1-206ENST00000490831 SHOXO15266 292 aa11.81□□□□□ -0.52
COL27A1-206ENST00000490831 KRTAP10-11P60412 298 aa11.81□□□□□ -0.52
COL27A1-206ENST00000490831 UBE2KP61086 200 aa11.81□□□□□ -0.52
COL27A1-206ENST00000490831 NCS1P62166 190 aa11.81□□□□□ -0.52
COL27A1-206ENST00000490831 PJVKQ0ZLH3 352 aa11.81□□□□□ -0.52
COL27A1-206ENST00000490831 ACTBL2Q562R1 376 aa11.81□□□□□ -0.52
COL27A1-206ENST00000490831 UNQ5815/PRO19632Q6UWF5 114 aa11.81□□□□□ -0.52
COL27A1-206ENST00000490831 SAMD12Q8N8I0 201 aa11.81□□□□□ -0.52
COL27A1-206ENST00000490831 TEX45Q8NA69 505 aa11.81□□□□□ -0.52
COL27A1-206ENST00000490831 LFNGQ8NES3 379 aa11.81□□□□□ -0.52
COL27A1-206ENST00000490831 SNAPC3Q92966 411 aa11.81□□□□□ -0.52
COL27A1-206ENST00000490831 CMTM3Q96MX0 182 aa11.81□□□□□ -0.52
COL27A1-206ENST00000490831 ANAPC10Q9UM13 185 aa11.81□□□□□ -0.52
COL27A1-206ENST00000490831 A3GALT2U3KPV4 340 aa11.81□□□□□ -0.52
COL27A1-206ENST00000490831 BRI3O95415 125 aa11.8□□□□□ -0.52
COL27A1-206ENST00000490831 CRYZL1O95825 349 aa11.8□□□□□ -0.52
COL27A1-206ENST00000490831 PTHLHP12272 177 aa11.8□□□□□ -0.52
COL27A1-206ENST00000490831 ARPC4P59998 168 aa11.8□□□□□ -0.52
COL27A1-206ENST00000490831 VBP1P61758 197 aa11.8□□□□□ -0.52
COL27A1-206ENST00000490831 RPL30P62888 115 aaKnown RBP11.8□□□□□ -0.52
COL27A1-206ENST00000490831 ASPHD1Q5U4P2 390 aa11.8□□□□□ -0.52
COL27A1-206ENST00000490831 ANKRD13BQ86YJ7 626 aa11.8□□□□□ -0.52
COL27A1-206ENST00000490831 OR11H1Q8NG94 326 aa11.8□□□□□ -0.52
COL27A1-206ENST00000490831 ABHD5Q8WTS1 349 aa11.8□□□□□ -0.52
COL27A1-206ENST00000490831 TMEM68Q96MH6 324 aa11.8□□□□□ -0.52
COL27A1-206ENST00000490831 HSD17B10Q99714 261 aaKnown RBP11.8□□□□□ -0.52
COL27A1-206ENST00000490831 PRELID3BQ9Y3B1 194 aa11.8□□□□□ -0.52
COL27A1-206ENST00000490831 TNCP24821 2201 aa11.8□□□□□ -0.52
COL27A1-206ENST00000490831 H3BUA1 57 aa11.79□□□□□ -0.52
COL27A1-206ENST00000490831 J3QRK9 145 aa11.79□□□□□ -0.52
COL27A1-206ENST00000490831 GABARAPO95166 117 aa11.79□□□□□ -0.52
COL27A1-206ENST00000490831 OR8U8P0C7N1 319 aa11.79□□□□□ -0.52
COL27A1-206ENST00000490831 TAS2R20P59543 309 aa11.79□□□□□ -0.52
COL27A1-206ENST00000490831 GNB1P62873 340 aa11.79□□□□□ -0.52
COL27A1-206ENST00000490831 ZNF616Q08AN1 781 aa11.79□□□□□ -0.52
COL27A1-206ENST00000490831 CTF1Q16619 201 aa11.79□□□□□ -0.52
COL27A1-206ENST00000490831 VMA21Q3ZAQ7 101 aa11.79□□□□□ -0.52
COL27A1-206ENST00000490831 TMEM69Q5SWH9 247 aa11.79□□□□□ -0.52
COL27A1-206ENST00000490831 ZNF66Q6ZN08 573 aa11.79□□□□□ -0.52
COL27A1-206ENST00000490831 KCTD9Q7L273 389 aa11.79□□□□□ -0.52
COL27A1-206ENST00000490831 OR5AP2Q8NGF4 316 aa11.79□□□□□ -0.52
COL27A1-206ENST00000490831 OR1N2Q8NGR9 330 aa11.79□□□□□ -0.52
COL27A1-206ENST00000490831 GRPEL2Q8TAA5 225 aa11.79□□□□□ -0.52
COL27A1-206ENST00000490831 MRAPQ8TCY5 172 aa11.79□□□□□ -0.52
COL27A1-206ENST00000490831 GIMAP1Q8WWP7 306 aa11.79□□□□□ -0.52
COL27A1-206ENST00000490831 SLA2Q9H6Q3 261 aa11.79□□□□□ -0.52
COL27A1-206ENST00000490831 CNIH1O95406 144 aa11.78□□□□□ -0.52
COL27A1-206ENST00000490831 PPYP01298 95 aa11.78□□□□□ -0.52
COL27A1-206ENST00000490831 LGALS1P09382 135 aaKnown RBP11.78□□□□□ -0.52
COL27A1-206ENST00000490831 NAT1P18440 290 aa11.78□□□□□ -0.52
COL27A1-206ENST00000490831 AADACP22760 399 aa11.78□□□□□ -0.52
COL27A1-206ENST00000490831 HOXD3P31249 432 aaPredicted RBP11.78□□□□□ -0.52
COL27A1-206ENST00000490831 FCGR2CP31995 323 aa11.78□□□□□ -0.52
COL27A1-206ENST00000490831 BRWD1-AS2P59051 145 aa11.78□□□□□ -0.52
COL27A1-206ENST00000490831 PRSS8Q16651 343 aa11.78□□□□□ -0.52
COL27A1-206ENST00000490831 MFSD4AQ8N468 514 aa11.78□□□□□ -0.52
COL27A1-206ENST00000490831 ZBTB34Q8NCN2 500 aa11.78□□□□□ -0.52
COL27A1-206ENST00000490831 ACOT12Q8WYK0 555 aa11.78□□□□□ -0.52
COL27A1-206ENST00000490831 DPF1Q92782 380 aa11.78□□□□□ -0.52
COL27A1-206ENST00000490831 RHOVQ96L33 236 aa11.78□□□□□ -0.52
COL27A1-206ENST00000490831 MRPS7Q9Y2R9 242 aaKnown RBP11.78□□□□□ -0.52
COL27A1-206ENST00000490831 K7EIL1 84 aa11.77□□□□□ -0.53
COL27A1-206ENST00000490831 FCGR3BO75015 233 aa11.77□□□□□ -0.53
COL27A1-206ENST00000490831 APOA1P02647 267 aa11.77□□□□□ -0.53
COL27A1-206ENST00000490831 EIF4EP06730 217 aaKnown RBP11.77□□□□□ -0.53
COL27A1-206ENST00000490831 SAA1P0DJI8 122 aaPredicted RBP11.77□□□□□ -0.53
COL27A1-206ENST00000490831 CD40LGP29965 261 aa11.77□□□□□ -0.53
COL27A1-206ENST00000490831 RAB25P57735 213 aa11.77□□□□□ -0.53
COL27A1-206ENST00000490831 CDK10Q15131 360 aa11.77□□□□□ -0.53
COL27A1-206ENST00000490831 POC5Q8NA72 575 aa11.77□□□□□ -0.53
COL27A1-206ENST00000490831 CASTOR1Q8WTX7 329 aa11.77□□□□□ -0.53
COL27A1-206ENST00000490831 NAA50Q9GZZ1 169 aaKnown RBP11.77□□□□□ -0.53
COL27A1-206ENST00000490831 ZMAT5Q9UDW3 170 aaKnown RBP11.77□□□□□ -0.53
COL27A1-206ENST00000490831 MEIS3P1A6NDR6 274 aa11.76□□□□□ -0.53
COL27A1-206ENST00000490831 ALDH3B2P48448 385 aa11.76□□□□□ -0.53
COL27A1-206ENST00000490831 RORCP51449 518 aa11.76□□□□□ -0.53
COL27A1-206ENST00000490831 C9orf66Q5T8R8 295 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms