RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 PITPNAQ00169 270 aa8.15□□□□□ -1.1
TTC28-207ENST00000490475 KIR2DS1Q14954 304 aa8.15□□□□□ -1.1
TTC28-207ENST00000490475 TATDN3Q17R31 274 aa8.15□□□□□ -1.1
TTC28-207ENST00000490475 LY6G6FQ5SQ64 297 aa8.15□□□□□ -1.1
TTC28-207ENST00000490475 C9orf66Q5T8R8 295 aa8.15□□□□□ -1.1
TTC28-207ENST00000490475 PYHIN1Q6K0P9 492 aa8.15□□□□□ -1.1
TTC28-207ENST00000490475 CNIH2Q6PI25 160 aa8.15□□□□□ -1.1
TTC28-207ENST00000490475 ETV3LQ6ZN32 361 aa8.15□□□□□ -1.1
TTC28-207ENST00000490475 C8orf86Q6ZUL3 223 aa8.15□□□□□ -1.1
TTC28-207ENST00000490475 ODF3L1Q8IXM7 274 aa8.15□□□□□ -1.1
TTC28-207ENST00000490475 SLC7A5P1Q8MH63 180 aa8.15□□□□□ -1.1
TTC28-207ENST00000490475 Q8N6K4 173 aa8.15□□□□□ -1.1
TTC28-207ENST00000490475 RNF152Q8N8N0 203 aa8.15□□□□□ -1.1
TTC28-207ENST00000490475 Q8N9W7 124 aa8.15□□□□□ -1.1
TTC28-207ENST00000490475 OR2AK2Q8NG84 335 aa8.15□□□□□ -1.1
TTC28-207ENST00000490475 NUDCD2Q8WVJ2 157 aa8.15□□□□□ -1.1
TTC28-207ENST00000490475 DEDD2Q8WXF8 326 aa8.15□□□□□ -1.1
TTC28-207ENST00000490475 ABHD14AQ9BUJ0 271 aa8.15□□□□□ -1.1
TTC28-207ENST00000490475 MGAT4AQ9UM21 535 aa8.15□□□□□ -1.1
TTC28-207ENST00000490475 WI2-2373I1.2A0A1W2PRP0 233 aa8.14□□□□□ -1.11
TTC28-207ENST00000490475 C7orf66A4D0T2 115 aa8.14□□□□□ -1.11
TTC28-207ENST00000490475 FABP7O15540 132 aa8.14□□□□□ -1.11
TTC28-207ENST00000490475 LANCL1O43813 399 aa8.14□□□□□ -1.11
TTC28-207ENST00000490475 SSX5O60225 188 aa8.14□□□□□ -1.11
TTC28-207ENST00000490475 DHFRP00374 187 aa8.14□□□□□ -1.11
TTC28-207ENST00000490475 IGF1P05019 195 aa8.14□□□□□ -1.11
TTC28-207ENST00000490475 GSTP1P09211 210 aaKnown RBP8.14□□□□□ -1.11
TTC28-207ENST00000490475 PTHLHP12272 177 aa8.14□□□□□ -1.11
TTC28-207ENST00000490475 HOXD3P31249 432 aaPredicted RBP8.14□□□□□ -1.11
TTC28-207ENST00000490475 INSL3P51460 131 aa8.14□□□□□ -1.11
TTC28-207ENST00000490475 ARPC4P59998 168 aa8.14□□□□□ -1.11
TTC28-207ENST00000490475 KRTAP10-11P60412 298 aa8.14□□□□□ -1.11
TTC28-207ENST00000490475 ARL6IP1Q15041 203 aa8.14□□□□□ -1.11
TTC28-207ENST00000490475 SAMD12Q8N8I0 201 aa8.14□□□□□ -1.11
TTC28-207ENST00000490475 OR4A4PQ8NGN8 299 aa8.14□□□□□ -1.11
TTC28-207ENST00000490475 C15orf40Q8WUR7 153 aa8.14□□□□□ -1.11
TTC28-207ENST00000490475 S100A16Q96FQ6 103 aaKnown RBP8.14□□□□□ -1.11
TTC28-207ENST00000490475 ABHD14BQ96IU4 210 aa8.14□□□□□ -1.11
TTC28-207ENST00000490475 WWC2-AS2Q96NR7 200 aa8.14□□□□□ -1.11
TTC28-207ENST00000490475 S1PR3Q99500 378 aa8.14□□□□□ -1.11
TTC28-207ENST00000490475 AGMATQ9BSE5 352 aa8.14□□□□□ -1.11
TTC28-207ENST00000490475 COMMD3Q9UBI1 195 aa8.14□□□□□ -1.11
TTC28-207ENST00000490475 SAA2-SAA4A0A096LPE2 208 aa8.13□□□□□ -1.11
TTC28-207ENST00000490475 TRBV6-7A0A0A0MS04 114 aa8.13□□□□□ -1.11
TTC28-207ENST00000490475 CTDSPLO15194 276 aa8.13□□□□□ -1.11
TTC28-207ENST00000490475 SCGNO76038 276 aa8.13□□□□□ -1.11
TTC28-207ENST00000490475 IGHG4P01861 327 aa8.13□□□□□ -1.11
TTC28-207ENST00000490475 SAA2P0DJI9 122 aaPredicted RBP8.13□□□□□ -1.11
TTC28-207ENST00000490475 M6PRP20645 277 aa8.13□□□□□ -1.11
TTC28-207ENST00000490475 NKX2-5P52952 324 aaPredicted RBP8.13□□□□□ -1.11
TTC28-207ENST00000490475 IL18Q14116 193 aa8.13□□□□□ -1.11
TTC28-207ENST00000490475 SRSF7Q16629 238 aaKnown RBP eCLIP8.13□□□□□ -1.11
TTC28-207ENST00000490475 RPL39P5Q59GN2 51 aa8.13□□□□□ -1.11
TTC28-207ENST00000490475 TMEM65Q6PI78 240 aa8.13□□□□□ -1.11
TTC28-207ENST00000490475 FAM71E2Q8N5Q1 922 aa8.13□□□□□ -1.11
TTC28-207ENST00000490475 C4orf3Q8WVX3 66 aa8.13□□□□□ -1.11
TTC28-207ENST00000490475 IFI27L2Q9H2X8 130 aa8.13□□□□□ -1.11
TTC28-207ENST00000490475 GHITMQ9H3K2 345 aa8.13□□□□□ -1.11
TTC28-207ENST00000490475 AUNIPQ9H7T9 357 aa8.13□□□□□ -1.11
TTC28-207ENST00000490475 RDH8Q9NYR8 311 aa8.13□□□□□ -1.11
TTC28-207ENST00000490475 RBMX2Q9Y388 322 aaKnown RBP8.13□□□□□ -1.11
TTC28-207ENST00000490475 TENM3Q9P273 2699 aa8.13□□□□□ -1.11
TTC28-207ENST00000490475 COL7A1Q02388 2944 aa8.12□□□□□ -1.11
TTC28-207ENST00000490475 A0A0A6YYH2 397 aa8.12□□□□□ -1.11
TTC28-207ENST00000490475 A6NJ64 397 aa8.12□□□□□ -1.11
TTC28-207ENST00000490475 INMT-MINDY4F8WBC2 141 aa8.12□□□□□ -1.11
TTC28-207ENST00000490475 RAB29O14966 203 aa8.12□□□□□ -1.11
TTC28-207ENST00000490475 XRCC3O43542 346 aa8.12□□□□□ -1.11
TTC28-207ENST00000490475 PROP1O75360 226 aa8.12□□□□□ -1.11
TTC28-207ENST00000490475 EIF4EP06730 217 aaKnown RBP8.12□□□□□ -1.11
TTC28-207ENST00000490475 FCER2P06734 321 aa8.12□□□□□ -1.11
TTC28-207ENST00000490475 OR8U8P0C7N1 319 aa8.12□□□□□ -1.11
TTC28-207ENST00000490475 CT45A6P0DMU7 189 aa8.12□□□□□ -1.11
TTC28-207ENST00000490475 CT45A5P0DMU8 189 aa8.12□□□□□ -1.11
TTC28-207ENST00000490475 CT45A7P0DMV0 189 aa8.12□□□□□ -1.11
TTC28-207ENST00000490475 C4BPBP20851 252 aa8.12□□□□□ -1.11
TTC28-207ENST00000490475 DTYMKP23919 212 aa8.12□□□□□ -1.11
TTC28-207ENST00000490475 F2RL1P55085 397 aa8.12□□□□□ -1.11
TTC28-207ENST00000490475 LINC00205P59089 165 aa8.12□□□□□ -1.11
TTC28-207ENST00000490475 MMDQ15546 238 aa8.12□□□□□ -1.11
TTC28-207ENST00000490475 UBE2NLQ5JXB2 153 aa8.12□□□□□ -1.11
TTC28-207ENST00000490475 FAM71F2Q6NXP2 309 aa8.12□□□□□ -1.11
TTC28-207ENST00000490475 Q6ZS49 121 aa8.12□□□□□ -1.11
TTC28-207ENST00000490475 LCNL1Q6ZST4 164 aa8.12□□□□□ -1.11
TTC28-207ENST00000490475 ZNF833PQ6ZTB9 187 aa8.12□□□□□ -1.11
TTC28-207ENST00000490475 GVQW1Q8N7I0 195 aa8.12□□□□□ -1.11
TTC28-207ENST00000490475 OR10J5Q8NHC4 309 aa8.12□□□□□ -1.11
TTC28-207ENST00000490475 RAX2Q96IS3 184 aa8.12□□□□□ -1.11
TTC28-207ENST00000490475 RITA1Q96K30 269 aa8.12□□□□□ -1.11
TTC28-207ENST00000490475 NABP2Q9BQ15 211 aa8.12□□□□□ -1.11
TTC28-207ENST00000490475 ZNF251Q9BRH9 671 aa8.12□□□□□ -1.11
TTC28-207ENST00000490475 MRPL20Q9BYC9 149 aaKnown RBP8.12□□□□□ -1.11
TTC28-207ENST00000490475 RANGRFQ9HD47 186 aaPredicted RBP8.12□□□□□ -1.11
TTC28-207ENST00000490475 PLSCR3Q9NRY6 295 aa8.12□□□□□ -1.11
TTC28-207ENST00000490475 ZNF107Q9UII5 783 aaPredicted RBP8.12□□□□□ -1.11
TTC28-207ENST00000490475 LINC00527Q9UJ94 153 aa8.12□□□□□ -1.11
TTC28-207ENST00000490475 NUBP2Q9Y5Y2 271 aa8.12□□□□□ -1.11
TTC28-207ENST00000490475 SORL1Q92673 2214 aa8.12□□□□□ -1.11
TTC28-207ENST00000490475 NAP1L6A6NFF2 107 aa8.11□□□□□ -1.11
TTC28-207ENST00000490475 ITGB1BP1O14713 200 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms