RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 AP1S3Q96PC3 154 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 PMCHL2Q9BQD1 86 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 ULBP2Q9BZM5 246 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 RTN4RQ9BZR6 473 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 GTSF1LQ9H1H1 148 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 PSENENQ9NZ42 101 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 RARRES3Q9UL19 164 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 LY96Q9Y6Y9 160 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 TTC28Q96AY4 2481 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 KIAA1549LQ6ZVL6 1849 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 DOCK11Q5JSL3 2073 aa4.03□□□□□ -1.77
SNRNP40-206ENST00000489853 PCNX3Q9H6A9 2034 aa4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 LRP5LA4QPB2 252 aa4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 PSMB11A5LHX3 300 aa4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 OR11H12B2RN74 326 aa4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 SYNGR2O43760 224 aa4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 SLC25A17O43808 307 aa4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 PSPNO60542 156 aa4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 CRYGCP07315 174 aa4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 CYC1P08574 325 aa4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 FCGR2AP12318 317 aa4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 COX5AP20674 150 aa4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 HNRNPA2B1P22626 353 aaKnown RBP4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 GATA2P23769 480 aaPredicted RBP4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 NPY1RP25929 384 aa4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 CLDN17P56750 224 aa4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 ARF3P61204 181 aaPredicted RBP4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 UBE2G1P62253 170 aa4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 ARF1P84077 181 aaKnown RBP4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 ARL16Q0P5N6 197 aa4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 MYBPHQ13203 477 aa4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 RAB31Q13636 194 aa4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 TRIP6Q15654 476 aaKnown RBP4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 TMEM211Q6ICI0 200 aa4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 SYT13Q7L8C5 426 aa4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 FAM19A2Q8N3H0 131 aa4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 ZNF114Q8NC26 417 aa4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 OR11H1Q8NG94 326 aa4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 OR2K2Q8NGT1 345 aa4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 OR11H2Q8NH07 326 aa4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 OR2AE1Q8NHA4 323 aa4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 OCC1Q8TAD7 63 aa4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 C10orf35Q96D05 121 aa4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 MRAP2Q96G30 205 aa4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 FER1L6-AS2Q96M78 137 aa4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 RCHY1Q96PM5 261 aa4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 OR2A5Q96R48 311 aa4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 DERL1Q9BUN8 251 aa4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 NPFFR1Q9GZQ6 430 aa4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 FNDC4Q9H6D8 234 aaPredicted RBP4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 TMEM74BQ9NUR3 256 aa4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 IL36GQ9NZH8 169 aa4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 JKAMPQ9P055 326 aa4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 NAT8BQ9UHF3 227 aa4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 PILRAQ9UKJ1 303 aa4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 HS3ST3A1Q9Y663 406 aa4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 LHFPL6Q9Y693 200 aa4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 ARID1BQ8NFD5 2236 aaPredicted RBP4.02□□□□□ -1.77
SNRNP40-206ENST00000489853 GAGE12HA6NDE8 117 aa4.01□□□□□ -1.77
SNRNP40-206ENST00000489853 MANSC4A6NHS7 340 aaPredicted RBP4.01□□□□□ -1.77
SNRNP40-206ENST00000489853 C2orf70A6NJV1 201 aa4.01□□□□□ -1.77
SNRNP40-206ENST00000489853 H0Y980 276 aa4.01□□□□□ -1.77
SNRNP40-206ENST00000489853 J3QR89 54 aa4.01□□□□□ -1.77
SNRNP40-206ENST00000489853 CRXO43186 299 aaPredicted RBP4.01□□□□□ -1.77
SNRNP40-206ENST00000489853 TNFSF14O43557 240 aa4.01□□□□□ -1.77
SNRNP40-206ENST00000489853 HLA-DQA1P01909 254 aa4.01□□□□□ -1.77
SNRNP40-206ENST00000489853 PRNPP04156 253 aa4.01□□□□□ -1.77
SNRNP40-206ENST00000489853 SERPINE2P07093 398 aa4.01□□□□□ -1.77
SNRNP40-206ENST00000489853 NTF3P20783 257 aa4.01□□□□□ -1.77
SNRNP40-206ENST00000489853 GPR183P32249 361 aa4.01□□□□□ -1.77
SNRNP40-206ENST00000489853 CEBPDP49716 269 aaPredicted RBP4.01□□□□□ -1.77
SNRNP40-206ENST00000489853 ZNF121P58317 390 aaPredicted RBP4.01□□□□□ -1.77
SNRNP40-206ENST00000489853 RPS18P62269 152 aaKnown RBP4.01□□□□□ -1.77
SNRNP40-206ENST00000489853 CX3CL1P78423 397 aa4.01□□□□□ -1.77
SNRNP40-206ENST00000489853 Q56UQ5 140 aa4.01□□□□□ -1.77
SNRNP40-206ENST00000489853 EBLN2Q6P2I7 272 aa4.01□□□□□ -1.77
SNRNP40-206ENST00000489853 ACSM6Q6P461 480 aa4.01□□□□□ -1.77
SNRNP40-206ENST00000489853 TMEM136Q6ZRR5 245 aa4.01□□□□□ -1.77
SNRNP40-206ENST00000489853 TMEM25Q86YD3 366 aa4.01□□□□□ -1.77
SNRNP40-206ENST00000489853 MMD2Q8IY49 270 aa4.01□□□□□ -1.77
SNRNP40-206ENST00000489853 CA13Q8N1Q1 262 aa4.01□□□□□ -1.77
SNRNP40-206ENST00000489853 ST6GALNAC3Q8NDV1 305 aa4.01□□□□□ -1.77
SNRNP40-206ENST00000489853 OR8B12Q8NGG6 310 aa4.01□□□□□ -1.77
SNRNP40-206ENST00000489853 VSTM2AQ8TAG5 236 aa4.01□□□□□ -1.77
SNRNP40-206ENST00000489853 C18orf32Q8TCD1 76 aa4.01□□□□□ -1.77
SNRNP40-206ENST00000489853 PP6455Q8WZ26 134 aa4.01□□□□□ -1.77
SNRNP40-206ENST00000489853 APOBEC3DQ96AK3 386 aaPredicted RBP4.01□□□□□ -1.77
SNRNP40-206ENST00000489853 TMEM204Q9BSN7 226 aa4.01□□□□□ -1.77
SNRNP40-206ENST00000489853 TMEM70Q9BUB7 260 aa4.01□□□□□ -1.77
SNRNP40-206ENST00000489853 MS4A6AQ9H2W1 248 aa4.01□□□□□ -1.77
SNRNP40-206ENST00000489853 SLC25A22Q9H936 323 aa4.01□□□□□ -1.77
SNRNP40-206ENST00000489853 SHANK1Q9Y566 2161 aa4.01□□□□□ -1.77
SNRNP40-206ENST00000489853 ATG2BQ96BY7 2078 aa4.01□□□□□ -1.77
SNRNP40-206ENST00000489853 A0A1W2PR80 420 aa4.01□□□□□ -1.77
SNRNP40-206ENST00000489853 A6NDN8 102 aa4.01□□□□□ -1.77
SNRNP40-206ENST00000489853 NPIPB13A6NJU9 1138 aa4.01□□□□□ -1.77
SNRNP40-206ENST00000489853 B9A039 149 aa4.01□□□□□ -1.77
SNRNP40-206ENST00000489853 NPIPB4C9JG80 1138 aa4.01□□□□□ -1.77
SNRNP40-206ENST00000489853 H3BP45 60 aa4.01□□□□□ -1.77
SNRNP40-206ENST00000489853 KLRC4-KLRK1H3BQV0 150 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms