RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 OR10G7Q8NGN6 311 aa13.08□□□□□ -0.32
BRD9-208ENST00000489816 OR4F5Q8NH21 305 aa13.08□□□□□ -0.32
BRD9-208ENST00000489816 OR4F4Q96R69 305 aa13.08□□□□□ -0.32
BRD9-208ENST00000489816 PATZ1Q9HBE1 687 aaKnown RBP13.08□□□□□ -0.32
BRD9-208ENST00000489816 ZNF71Q9NQZ8 489 aaPredicted RBP13.08□□□□□ -0.32
BRD9-208ENST00000489816 DCAF16Q9NXF7 216 aa13.08□□□□□ -0.32
BRD9-208ENST00000489816 TMEM210A6NLX4 147 aa13.08□□□□□ -0.32
BRD9-208ENST00000489816 SLC31A2O15432 143 aa13.08□□□□□ -0.32
BRD9-208ENST00000489816 MYOD1P15172 320 aa13.08□□□□□ -0.32
BRD9-208ENST00000489816 TMEM41BQ5BJD5 291 aa13.08□□□□□ -0.32
BRD9-208ENST00000489816 ABHD12Q8N2K0 398 aa13.08□□□□□ -0.32
BRD9-208ENST00000489816 HSPB7Q9UBY9 170 aa13.08□□□□□ -0.32
BRD9-208ENST00000489816 ZNF318Q5VUA4 2279 aa13.07□□□□□ -0.32
BRD9-208ENST00000489816 SPINT2O43291 252 aa13.07□□□□□ -0.32
BRD9-208ENST00000489816 IFNA10P01566 189 aa13.07□□□□□ -0.32
BRD9-208ENST00000489816 IGHV2-5P01817 119 aa13.07□□□□□ -0.32
BRD9-208ENST00000489816 PAX6P26367 422 aa13.07□□□□□ -0.32
BRD9-208ENST00000489816 TMEM14EPQ6UXP3 125 aa13.07□□□□□ -0.32
BRD9-208ENST00000489816 BHLHA15Q7RTS1 189 aaPredicted RBP13.07□□□□□ -0.32
BRD9-208ENST00000489816 OR51G1Q8NGK1 321 aa13.07□□□□□ -0.32
BRD9-208ENST00000489816 R3HDM4Q96D70 268 aa13.07□□□□□ -0.32
BRD9-208ENST00000489816 AGMATQ9BSE5 352 aa13.07□□□□□ -0.32
BRD9-208ENST00000489816 RYDENQ9NUL5 291 aaKnown RBP13.07□□□□□ -0.32
BRD9-208ENST00000489816 C1orf229Q6ZS94 237 aaPredicted RBP13.07□□□□□ -0.32
BRD9-208ENST00000489816 YPEL4Q96NS1 127 aa13.07□□□□□ -0.32
BRD9-208ENST00000489816 ATRXP46100 2492 aa13.06□□□□□ -0.32
BRD9-208ENST00000489816 CD81P60033 236 aa13.06□□□□□ -0.32
BRD9-208ENST00000489816 RAB24Q969Q5 203 aa13.06□□□□□ -0.32
BRD9-208ENST00000489816 MIOXQ9UGB7 285 aa13.06□□□□□ -0.32
BRD9-208ENST00000489816 CUL9Q8IWT3 2517 aa13.06□□□□□ -0.32
BRD9-208ENST00000489816 PAGE4O60829 102 aa13.06□□□□□ -0.32
BRD9-208ENST00000489816 COX5AP20674 150 aa13.06□□□□□ -0.32
BRD9-208ENST00000489816 FAM27E3Q08E93 113 aa13.06□□□□□ -0.32
BRD9-208ENST00000489816 PRAMEF5Q5TYX0 476 aa13.06□□□□□ -0.32
BRD9-208ENST00000489816 GCSAMQ8N6F7 178 aa13.06□□□□□ -0.32
BRD9-208ENST00000489816 ASH1LQ9NR48 2969 aaKnown RBP13.06□□□□□ -0.32
BRD9-208ENST00000489816 GNG10P50151 68 aa13.06□□□□□ -0.32
BRD9-208ENST00000489816 ZNF474Q6S9Z5 364 aaPredicted RBP13.06□□□□□ -0.32
BRD9-208ENST00000489816 ITLN1Q8WWA0 313 aa13.06□□□□□ -0.32
BRD9-208ENST00000489816 GPR61Q9BZJ8 451 aa13.06□□□□□ -0.32
BRD9-208ENST00000489816 SVEP1Q4LDE5 3571 aa13.05□□□□□ -0.32
BRD9-208ENST00000489816 TET2Q6N021 2002 aaPredicted RBP13.05□□□□□ -0.32
BRD9-208ENST00000489816 BSNQ9UPA5 3926 aa13.05□□□□□ -0.32
BRD9-208ENST00000489816 GUSBP1Q15486 140 aa13.05□□□□□ -0.32
BRD9-208ENST00000489816 ZNF709Q8N972 641 aa13.05□□□□□ -0.32
BRD9-208ENST00000489816 FAM210BQ96KR6 192 aa13.05□□□□□ -0.32
BRD9-208ENST00000489816 SMDT1Q9H4I9 107 aa13.05□□□□□ -0.32
BRD9-208ENST00000489816 HEYLQ9NQ87 328 aaPredicted RBP13.05□□□□□ -0.32
BRD9-208ENST00000489816 METTL1Q9UBP6 276 aaKnown RBP13.05□□□□□ -0.32
BRD9-208ENST00000489816 VAX2Q9UIW0 290 aa13.05□□□□□ -0.32
BRD9-208ENST00000489816 IFITM10A6NMD0 228 aa13.05□□□□□ -0.32
BRD9-208ENST00000489816 AQP7O14520 342 aa13.05□□□□□ -0.32
BRD9-208ENST00000489816 HIST1H2BKO60814 126 aa13.05□□□□□ -0.32
BRD9-208ENST00000489816 HIST1H2BJP06899 126 aa13.05□□□□□ -0.32
BRD9-208ENST00000489816 HNF1AP20823 631 aa13.05□□□□□ -0.32
BRD9-208ENST00000489816 HIST1H2BOP23527 126 aa13.05□□□□□ -0.32
BRD9-208ENST00000489816 HIST1H2BBP33778 126 aa13.05□□□□□ -0.32
BRD9-208ENST00000489816 HIST1H2BDP58876 126 aa13.05□□□□□ -0.32
BRD9-208ENST00000489816 HIST1H2BCP62807 126 aa13.05□□□□□ -0.32
BRD9-208ENST00000489816 SERF2P84101 59 aa13.05□□□□□ -0.32
BRD9-208ENST00000489816 HIST2H2BEQ16778 126 aa13.05□□□□□ -0.32
BRD9-208ENST00000489816 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.05□□□□□ -0.32
BRD9-208ENST00000489816 FRZBQ92765 325 aa13.05□□□□□ -0.32
BRD9-208ENST00000489816 HIST1H2BHQ93079 126 aa13.05□□□□□ -0.32
BRD9-208ENST00000489816 HIST1H2BNQ99877 126 aa13.05□□□□□ -0.32
BRD9-208ENST00000489816 HIST1H2BMQ99879 126 aa13.05□□□□□ -0.32
BRD9-208ENST00000489816 ELOVL1Q9BW60 279 aa13.05□□□□□ -0.32
BRD9-208ENST00000489816 CISD1Q9NZ45 108 aaKnown RBP13.05□□□□□ -0.32
BRD9-208ENST00000489816 PGPEP1LA6NFU8 196 aa13.04□□□□□ -0.32
BRD9-208ENST00000489816 C1QTNF9BB2RNN3 333 aa13.04□□□□□ -0.32
BRD9-208ENST00000489816 RRHO14718 337 aa13.04□□□□□ -0.32
BRD9-208ENST00000489816 CLDN14O95500 239 aa13.04□□□□□ -0.32
BRD9-208ENST00000489816 FABP1P07148 127 aa13.04□□□□□ -0.32
BRD9-208ENST00000489816 CST9LP1Q5W188 147 aa13.04□□□□□ -0.32
BRD9-208ENST00000489816 Q8TCH9 128 aa13.04□□□□□ -0.32
BRD9-208ENST00000489816 GSN-AS1Q9NRJ2 163 aa13.04□□□□□ -0.32
BRD9-208ENST00000489816 PLSCR4Q9NRQ2 329 aa13.04□□□□□ -0.32
BRD9-208ENST00000489816 CYB5R3P00387 301 aaPredicted RBP13.04□□□□□ -0.32
BRD9-208ENST00000489816 SLC35E3Q7Z769 313 aa13.04□□□□□ -0.32
BRD9-208ENST00000489816 MRGPRGQ86SM5 289 aa13.04□□□□□ -0.32
BRD9-208ENST00000489816 SSMEM1Q8WWF3 244 aa13.04□□□□□ -0.32
BRD9-208ENST00000489816 MBD3L1Q8WWY6 194 aa13.04□□□□□ -0.32
BRD9-208ENST00000489816 NPCDR1Q9BY65 106 aa13.04□□□□□ -0.32
BRD9-208ENST00000489816 C15orf65H3BRN8 121 aa13.04□□□□□ -0.32
BRD9-208ENST00000489816 PPIHO43447 177 aaKnown RBP13.04□□□□□ -0.32
BRD9-208ENST00000489816 EIF2S3P41091 472 aaKnown RBP13.04□□□□□ -0.32
BRD9-208ENST00000489816 MEF2BQ02080 365 aaPredicted RBP13.04□□□□□ -0.32
BRD9-208ENST00000489816 SNIP1Q8TAD8 396 aaKnown RBP13.04□□□□□ -0.32
BRD9-208ENST00000489816 SNX22Q96L94 193 aa13.04□□□□□ -0.32
BRD9-208ENST00000489816 PSMG3Q9BT73 122 aaPredicted RBP13.04□□□□□ -0.32
BRD9-208ENST00000489816 SDF2L1Q9HCN8 221 aa13.04□□□□□ -0.32
BRD9-208ENST00000489816 TRAV20A0A0B4J274 112 aa13.03□□□□□ -0.32
BRD9-208ENST00000489816 PMS2P5A8MQ11 134 aa13.03□□□□□ -0.32
BRD9-208ENST00000489816 J3QW42 95 aa13.03□□□□□ -0.32
BRD9-208ENST00000489816 MORN2Q502X0 79 aa13.03□□□□□ -0.32
BRD9-208ENST00000489816 ABHD5Q8WTS1 349 aa13.03□□□□□ -0.32
BRD9-208ENST00000489816 TMEM147Q9BVK8 224 aa13.03□□□□□ -0.32
BRD9-208ENST00000489816 IGF2RP11717 2491 aa13.03□□□□□ -0.32
BRD9-208ENST00000489816 AKAP6Q13023 2319 aa13.03□□□□□ -0.32
BRD9-208ENST00000489816 ZZEF1O43149 2961 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms