RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 RRASP10301 218 aa12.84□□□□□ -0.35
CLIC4-203ENST00000489758 F2RP25116 425 aa12.84□□□□□ -0.35
CLIC4-203ENST00000489758 F2RL1P55085 397 aa12.84□□□□□ -0.35
CLIC4-203ENST00000489758 CATR1Q13166 79 aa12.84□□□□□ -0.35
CLIC4-203ENST00000489758 RTL8BQ17RB0 113 aa12.84□□□□□ -0.35
CLIC4-203ENST00000489758 TMEM177Q53S58 311 aa12.84□□□□□ -0.35
CLIC4-203ENST00000489758 C16orf87Q6PH81 154 aa12.84□□□□□ -0.35
CLIC4-203ENST00000489758 ADAD2Q8NCV1 583 aaKnown RBP12.84□□□□□ -0.35
CLIC4-203ENST00000489758 C14orf166Q9Y224 244 aaKnown RBP12.84□□□□□ -0.35
CLIC4-203ENST00000489758 RBFOX2O43251 390 aaKnown RBP eCLIP12.83□□□□□ -0.36
CLIC4-203ENST00000489758 AMY1AP04745 511 aa12.83□□□□□ -0.36
CLIC4-203ENST00000489758 VSIG10L2P0DP72 767 aa12.83□□□□□ -0.36
CLIC4-203ENST00000489758 CNTFRP26992 372 aa12.83□□□□□ -0.36
CLIC4-203ENST00000489758 S100GP29377 79 aa12.83□□□□□ -0.36
CLIC4-203ENST00000489758 KIR2DS2P43631 304 aa12.83□□□□□ -0.36
CLIC4-203ENST00000489758 DHRS7BQ6IAN0 325 aaPredicted RBP12.83□□□□□ -0.36
CLIC4-203ENST00000489758 MZT2BQ6NZ67 158 aa12.83□□□□□ -0.36
CLIC4-203ENST00000489758 C16orf82Q7Z2V1 217 aa12.83□□□□□ -0.36
CLIC4-203ENST00000489758 SPAG16Q8N0X2 631 aa12.83□□□□□ -0.36
CLIC4-203ENST00000489758 OR4C13Q8NGP0 309 aa12.83□□□□□ -0.36
CLIC4-203ENST00000489758 FLYWCH2Q96CP2 140 aaKnown RBP12.83□□□□□ -0.36
CLIC4-203ENST00000489758 RNF5Q99942 180 aa12.83□□□□□ -0.36
CLIC4-203ENST00000489758 SLC25A33Q9BSK2 321 aa12.83□□□□□ -0.36
CLIC4-203ENST00000489758 PALMDQ9NP74 551 aa12.83□□□□□ -0.36
CLIC4-203ENST00000489758 COPZ2Q9P299 210 aa12.83□□□□□ -0.36
CLIC4-203ENST00000489758 CRYM-AS1A6NIL9 109 aa12.82□□□□□ -0.36
CLIC4-203ENST00000489758 SRRM4A7MD48 611 aaKnown RBP12.82□□□□□ -0.36
CLIC4-203ENST00000489758 CRYZL1O95825 349 aa12.82□□□□□ -0.36
CLIC4-203ENST00000489758 IGLV2-23P01705 113 aa12.82□□□□□ -0.36
CLIC4-203ENST00000489758 ZNF585BQ52M93 769 aa12.82□□□□□ -0.36
CLIC4-203ENST00000489758 CCDC71LQ8N9Z2 235 aa12.82□□□□□ -0.36
CLIC4-203ENST00000489758 NPBQ8NG41 125 aa12.82□□□□□ -0.36
CLIC4-203ENST00000489758 OR8H1Q8NGG4 311 aa12.82□□□□□ -0.36
CLIC4-203ENST00000489758 OR4S2Q8NH73 311 aa12.82□□□□□ -0.36
CLIC4-203ENST00000489758 CD300LFQ8TDQ1 290 aa12.82□□□□□ -0.36
CLIC4-203ENST00000489758 TP53RKQ96S44 253 aa12.82□□□□□ -0.36
CLIC4-203ENST00000489758 LIN7CQ9NUP9 197 aaKnown RBP12.82□□□□□ -0.36
CLIC4-203ENST00000489758 FLVCR2Q9UPI3 526 aa12.82□□□□□ -0.36
CLIC4-203ENST00000489758 MOB4Q9Y3A3 225 aa12.82□□□□□ -0.36
CLIC4-203ENST00000489758 C3orf85A0A1B0GTC6 90 aa12.81□□□□□ -0.36
CLIC4-203ENST00000489758 FAM181BA6NEQ2 426 aa12.81□□□□□ -0.36
CLIC4-203ENST00000489758 H0Y980 276 aa12.81□□□□□ -0.36
CLIC4-203ENST00000489758 PEX14O75381 377 aa12.81□□□□□ -0.36
CLIC4-203ENST00000489758 NDUFA3O95167 84 aa12.81□□□□□ -0.36
CLIC4-203ENST00000489758 TCRBP04435 133 aa12.81□□□□□ -0.36
CLIC4-203ENST00000489758 DEFA1P59665 94 aa12.81□□□□□ -0.36
CLIC4-203ENST00000489758 DEFA3P59666 94 aa12.81□□□□□ -0.36
CLIC4-203ENST00000489758 SUPT4H1P63272 117 aaKnown RBP12.81□□□□□ -0.36
CLIC4-203ENST00000489758 CBX3Q13185 183 aa12.81□□□□□ -0.36
CLIC4-203ENST00000489758 TMED4Q7Z7H5 227 aa12.81□□□□□ -0.36
CLIC4-203ENST00000489758 FAM71E2Q8N5Q1 922 aa12.81□□□□□ -0.36
CLIC4-203ENST00000489758 TCTEX1D1Q8N7M0 179 aa12.81□□□□□ -0.36
CLIC4-203ENST00000489758 C5orf56Q8N8D9 126 aa12.81□□□□□ -0.36
CLIC4-203ENST00000489758 Q8N9W7 124 aa12.81□□□□□ -0.36
CLIC4-203ENST00000489758 POC5Q8NA72 575 aa12.81□□□□□ -0.36
CLIC4-203ENST00000489758 OSR1Q8TAX0 266 aaPredicted RBP12.81□□□□□ -0.36
CLIC4-203ENST00000489758 C20orf85Q9H1P6 137 aa12.81□□□□□ -0.36
CLIC4-203ENST00000489758 NAA60Q9H7X0 242 aa12.81□□□□□ -0.36
CLIC4-203ENST00000489758 RAB18Q9NP72 206 aa12.81□□□□□ -0.36
CLIC4-203ENST00000489758 FAM212BQ9NTI7 297 aaPredicted RBP12.81□□□□□ -0.36
CLIC4-203ENST00000489758 FAM240BA0A1B0GVZ2 78 aa12.8□□□□□ -0.36
CLIC4-203ENST00000489758 TRIM77I1YAP6 450 aa12.8□□□□□ -0.36
CLIC4-203ENST00000489758 ARPC1BO15143 372 aaKnown RBP12.8□□□□□ -0.36
CLIC4-203ENST00000489758 NBR2O15453 112 aa12.8□□□□□ -0.36
CLIC4-203ENST00000489758 FGF16O43320 207 aa12.8□□□□□ -0.36
CLIC4-203ENST00000489758 AKR1C4P17516 323 aa12.8□□□□□ -0.36
CLIC4-203ENST00000489758 RPL15P61313 204 aaKnown RBP12.8□□□□□ -0.36
CLIC4-203ENST00000489758 RPS16P62249 146 aaKnown RBP12.8□□□□□ -0.36
CLIC4-203ENST00000489758 PSG5Q15238 335 aa12.8□□□□□ -0.36
CLIC4-203ENST00000489758 MMDQ15546 238 aa12.8□□□□□ -0.36
CLIC4-203ENST00000489758 SP6Q3SY56 376 aa12.8□□□□□ -0.36
CLIC4-203ENST00000489758 C11orf88Q6PI97 169 aa12.8□□□□□ -0.36
CLIC4-203ENST00000489758 NRARPQ7Z6K4 114 aa12.8□□□□□ -0.36
CLIC4-203ENST00000489758 SLC25A42Q86VD7 318 aa12.8□□□□□ -0.36
CLIC4-203ENST00000489758 CENPSQ8N2Z9 138 aa12.8□□□□□ -0.36
CLIC4-203ENST00000489758 HARBI1Q96MB7 349 aa12.8□□□□□ -0.36
CLIC4-203ENST00000489758 PLEKHA2Q9HB19 425 aa12.8□□□□□ -0.36
CLIC4-203ENST00000489758 TEX13DA0A0J9YY54 714 aaPredicted RBP12.79□□□□□ -0.36
CLIC4-203ENST00000489758 NCBP2LA6PVI3 153 aaKnown RBP12.79□□□□□ -0.36
CLIC4-203ENST00000489758 RRHO14718 337 aa12.79□□□□□ -0.36
CLIC4-203ENST00000489758 SHOXO15266 292 aa12.79□□□□□ -0.36
CLIC4-203ENST00000489758 S1PR2O95136 353 aa12.79□□□□□ -0.36
CLIC4-203ENST00000489758 SPDEFO95238 335 aa12.79□□□□□ -0.36
CLIC4-203ENST00000489758 HPRT1P00492 218 aa12.79□□□□□ -0.36
CLIC4-203ENST00000489758 IGKV1-39P01597 117 aa12.79□□□□□ -0.36
CLIC4-203ENST00000489758 IGKV1D-39P04432 117 aa12.79□□□□□ -0.36
CLIC4-203ENST00000489758 CRYGBP07316 175 aa12.79□□□□□ -0.36
CLIC4-203ENST00000489758 LPAR6P43657 344 aa12.79□□□□□ -0.36
CLIC4-203ENST00000489758 LGALS7P47929 136 aa12.79□□□□□ -0.36
CLIC4-203ENST00000489758 BLCAPP62952 87 aa12.79□□□□□ -0.36
CLIC4-203ENST00000489758 RELBQ01201 579 aa12.79□□□□□ -0.36
CLIC4-203ENST00000489758 DHODHQ02127 395 aa12.79□□□□□ -0.36
CLIC4-203ENST00000489758 DCTN2Q13561 401 aaKnown RBP12.79□□□□□ -0.36
CLIC4-203ENST00000489758 TMEM128Q5BJH2 165 aa12.79□□□□□ -0.36
CLIC4-203ENST00000489758 DUSP18Q8NEJ0 188 aa12.79□□□□□ -0.36
CLIC4-203ENST00000489758 ZFAND2BQ8WV99 257 aa12.79□□□□□ -0.36
CLIC4-203ENST00000489758 TAF15Q92804 592 aaKnown RBP eCLIP12.79□□□□□ -0.36
CLIC4-203ENST00000489758 GALNT14Q96FL9 552 aa12.79□□□□□ -0.36
CLIC4-203ENST00000489758 TSNAXQ99598 290 aaKnown RBP12.79□□□□□ -0.36
CLIC4-203ENST00000489758 NUDT15Q9NV35 164 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms