RNA–Protein interactions for RNA: ENST00000489687.1

CNOT9-207, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 288 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-207ENST00000489687 TOMM20LQ6UXN7 152 aa4.82□□□□□ -1.64
CNOT9-207ENST00000489687 MEPCEQ7L2J0 689 aaKnown RBP4.82□□□□□ -1.64
CNOT9-207ENST00000489687 MTURNQ8N3F0 131 aa4.82□□□□□ -1.64
CNOT9-207ENST00000489687 PNKDQ8N490 385 aa4.82□□□□□ -1.64
CNOT9-207ENST00000489687 FAM71E2Q8N5Q1 922 aa4.82□□□□□ -1.64
CNOT9-207ENST00000489687 BOLLQ8N9W6 283 aaKnown RBP4.82□□□□□ -1.64
CNOT9-207ENST00000489687 OR5D18Q8NGL1 313 aa4.82□□□□□ -1.64
CNOT9-207ENST00000489687 OR10S1Q8NGN2 331 aa4.82□□□□□ -1.64
CNOT9-207ENST00000489687 OR4S2Q8NH73 311 aa4.82□□□□□ -1.64
CNOT9-207ENST00000489687 LGALS14Q8TCE9 139 aa4.82□□□□□ -1.64
CNOT9-207ENST00000489687 Q8WTZ3 238 aa4.82□□□□□ -1.64
CNOT9-207ENST00000489687 TMED6Q8WW62 240 aa4.82□□□□□ -1.64
CNOT9-207ENST00000489687 PTX4Q96A99 478 aa4.82□□□□□ -1.64
CNOT9-207ENST00000489687 SMIM19Q96E16 107 aa4.82□□□□□ -1.64
CNOT9-207ENST00000489687 C1orf147Q96MC9 270 aaPredicted RBP4.82□□□□□ -1.64
CNOT9-207ENST00000489687 TMEM56Q96MV1 263 aa4.82□□□□□ -1.64
CNOT9-207ENST00000489687 ZNF48Q96MX3 618 aaPredicted RBP4.82□□□□□ -1.64
CNOT9-207ENST00000489687 YPEL2Q96QA6 119 aa4.82□□□□□ -1.64
CNOT9-207ENST00000489687 RNF2Q99496 336 aa4.82□□□□□ -1.64
CNOT9-207ENST00000489687 NUDT16L1Q9BRJ7 211 aaKnown RBP4.82□□□□□ -1.64
CNOT9-207ENST00000489687 BEX1Q9HBH7 125 aa4.82□□□□□ -1.64
CNOT9-207ENST00000489687 GCM1Q9NP62 436 aa4.82□□□□□ -1.64
CNOT9-207ENST00000489687 RAB18Q9NP72 206 aa4.82□□□□□ -1.64
CNOT9-207ENST00000489687 PNRC2Q9NPJ4 139 aaKnown RBP4.82□□□□□ -1.64
CNOT9-207ENST00000489687 TNFRSF19Q9NS68 423 aa4.82□□□□□ -1.64
CNOT9-207ENST00000489687 MRPL22Q9NWU5 206 aaKnown RBP4.82□□□□□ -1.64
CNOT9-207ENST00000489687 KLK11Q9UBX7 282 aa4.82□□□□□ -1.64
CNOT9-207ENST00000489687 NAGKQ9UJ70 344 aa4.82□□□□□ -1.64
CNOT9-207ENST00000489687 SLC45A2Q9UMX9 530 aa4.82□□□□□ -1.64
CNOT9-207ENST00000489687 MRPS16Q9Y3D3 137 aaKnown RBP4.82□□□□□ -1.64
CNOT9-207ENST00000489687 TMEM56-RWDD3S4R434 201 aa4.82□□□□□ -1.64
CNOT9-207ENST00000489687 TRAV1-1A0A0B4J248 108 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 A0A1W2PPE2 198 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 DHRS7CA6NNS2 312 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 C22orf46C9J442 243 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 CLDN34H7C241 214 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 J3QLI3 93 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 M0R036 132 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 TXNDC12O95881 172 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 RENP00797 406 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 LCATP04180 440 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 CRYGCP07315 174 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 ZNF735P0CB33 412 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 PGAM2P15259 253 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 TNFRSF1AP19438 455 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 CA6P23280 308 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 DCTDP32321 178 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 MDH2P40926 338 aaKnown RBP4.81□□□□□ -1.64
CNOT9-207ENST00000489687 RAB7AP51149 207 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 PRRX1P54821 245 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 RPS11P62280 158 aaKnown RBP eCLIP4.81□□□□□ -1.64
CNOT9-207ENST00000489687 RAB11AP62491 216 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 PAFAH1B2P68402 229 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 HIST1H3AP68431 136 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 PRB3Q04118 309 aaPredicted RBP4.81□□□□□ -1.64
CNOT9-207ENST00000489687 ZNF154Q13106 437 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 OR5I1Q13606 314 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 CNN3Q15417 329 aaKnown RBP4.81□□□□□ -1.64
CNOT9-207ENST00000489687 TAF13Q15543 124 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 OCIAD2Q56VL3 154 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 RUSC1-AS1Q66K80 236 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 STEAP1BQ6NZ63 245 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 DUX4L9Q6RFH8 374 aaPredicted RBP4.81□□□□□ -1.64
CNOT9-207ENST00000489687 LYPD2Q6UXB3 125 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 UNQ6126/PRO20091Q6UXV3 157 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 DPPA3Q6W0C5 159 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 BRD3OSQ6XYD6 125 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 FAM220AQ7Z4H9 259 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 LYG1Q8N1E2 194 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 FGFRL1Q8N441 504 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 C11orf42Q8N5U0 333 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 IQCF1Q8N6M8 205 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 C3orf56Q8N813 242 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 ZNF738Q8NE65 137 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 OR52E2Q8NGJ4 325 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 OR52B4Q8NGK2 314 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 OR5B3Q8NH48 314 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 ZNF671Q8TAW3 534 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 GPR148Q8TDV2 347 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 TMEM170AQ8WVE7 144 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 SECTM1Q8WVN6 248 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 FRZBQ92765 325 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 ISOC2Q96AB3 205 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 APOBEC3DQ96AK3 386 aaPredicted RBP4.81□□□□□ -1.64
CNOT9-207ENST00000489687 RPUSD4Q96CM3 377 aaKnown RBP4.81□□□□□ -1.64
CNOT9-207ENST00000489687 TVP23CQ96ET8 276 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 TP53RKQ96S44 253 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 FAAP24Q9BTP7 215 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 HRH4Q9H3N8 390 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 ZNF430Q9H8G1 570 aaPredicted RBP4.81□□□□□ -1.64
CNOT9-207ENST00000489687 CNTD2Q9H8S5 307 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 MED20Q9H944 212 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 ELL3Q9HB65 397 aaPredicted RBP4.81□□□□□ -1.64
CNOT9-207ENST00000489687 PATZ1Q9HBE1 687 aaKnown RBP4.81□□□□□ -1.64
CNOT9-207ENST00000489687 H2AFY2Q9P0M6 372 aaPredicted RBP4.81□□□□□ -1.64
CNOT9-207ENST00000489687 OR5V1Q9UGF6 321 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 B9D1Q9UPM9 204 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 ST3GAL6Q9Y274 331 aa4.81□□□□□ -1.64
CNOT9-207ENST00000489687 SIRT4Q9Y6E7 314 aaPredicted RBP4.81□□□□□ -1.64
CNOT9-207ENST00000489687 V9GY05 133 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms