RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 PRSS8Q16651 343 aa10.71□□□□□ -0.69
UFD1-209ENST00000489406 FDX2Q6P4F2 183 aa10.71□□□□□ -0.69
UFD1-209ENST00000489406 Q6ZSN1 163 aa10.71□□□□□ -0.69
UFD1-209ENST00000489406 EEF1AKMT3Q96AZ1 226 aa10.71□□□□□ -0.69
UFD1-209ENST00000489406 JAM3Q9BX67 310 aa10.71□□□□□ -0.69
UFD1-209ENST00000489406 ABRACLQ9P1F3 81 aa10.71□□□□□ -0.69
UFD1-209ENST00000489406 TMED3Q9Y3Q3 217 aa10.71□□□□□ -0.69
UFD1-209ENST00000489406 LRRC42Q9Y546 428 aa10.71□□□□□ -0.69
UFD1-209ENST00000489406 BAG2O95816 211 aa10.7□□□□□ -0.7
UFD1-209ENST00000489406 GSTT2P0CG29 244 aa10.7□□□□□ -0.7
UFD1-209ENST00000489406 GSTT2BP0CG30 244 aa10.7□□□□□ -0.7
UFD1-209ENST00000489406 ATP6V1E1P36543 226 aa10.7□□□□□ -0.7
UFD1-209ENST00000489406 IDO2Q6ZQW0 420 aa10.7□□□□□ -0.7
UFD1-209ENST00000489406 GID4Q8IVV7 300 aa10.7□□□□□ -0.7
UFD1-209ENST00000489406 TMEM163Q8TC26 289 aa10.7□□□□□ -0.7
UFD1-209ENST00000489406 FAM210BQ96KR6 192 aa10.7□□□□□ -0.7
UFD1-209ENST00000489406 IL4I1Q96RQ9 567 aa10.7□□□□□ -0.7
UFD1-209ENST00000489406 SPIN2AQ99865 258 aa10.7□□□□□ -0.7
UFD1-209ENST00000489406 SPIN2BQ9BPZ2 258 aa10.7□□□□□ -0.7
UFD1-209ENST00000489406 C11orf54Q9H0W9 315 aaPredicted RBP10.7□□□□□ -0.7
UFD1-209ENST00000489406 MAGIXQ9H6Y5 334 aa10.7□□□□□ -0.7
UFD1-209ENST00000489406 ISG20L2Q9H9L3 353 aaKnown RBP10.7□□□□□ -0.7
UFD1-209ENST00000489406 ARL8BQ9NVJ2 186 aa10.7□□□□□ -0.7
UFD1-209ENST00000489406 PAK1IP1Q9NWT1 392 aaPredicted RBP10.7□□□□□ -0.7
UFD1-209ENST00000489406 RAB21Q9UL25 225 aa10.7□□□□□ -0.7
UFD1-209ENST00000489406 GMPPBQ9Y5P6 360 aa10.7□□□□□ -0.7
UFD1-209ENST00000489406 A0A1B0GW64 132 aa10.69□□□□□ -0.7
UFD1-209ENST00000489406 TGOLN2O43493 480 aa10.69□□□□□ -0.7
UFD1-209ENST00000489406 ZNF780AO75290 641 aaPredicted RBP10.69□□□□□ -0.7
UFD1-209ENST00000489406 GIG44P09565 113 aaPredicted RBP10.69□□□□□ -0.7
UFD1-209ENST00000489406 FAM3BP58499 235 aaPredicted RBP10.69□□□□□ -0.7
UFD1-209ENST00000489406 RPS27AP62979 156 aaKnown RBP10.69□□□□□ -0.7
UFD1-209ENST00000489406 PTGES3Q15185 160 aaKnown RBP10.69□□□□□ -0.7
UFD1-209ENST00000489406 HMGN3Q15651 99 aa10.69□□□□□ -0.7
UFD1-209ENST00000489406 C10orf55Q5SWW7 151 aa10.69□□□□□ -0.7
UFD1-209ENST00000489406 ATP6V1G3Q96LB4 118 aa10.69□□□□□ -0.7
UFD1-209ENST00000489406 TAS2R4Q9NYW5 299 aa10.69□□□□□ -0.7
UFD1-209ENST00000489406 WARS2Q9UGM6 360 aaKnown RBP10.69□□□□□ -0.7
UFD1-209ENST00000489406 ZNF257Q9Y2Q1 563 aa10.69□□□□□ -0.7
UFD1-209ENST00000489406 IGKV3-7A0A075B6H7 116 aa10.68□□□□□ -0.7
UFD1-209ENST00000489406 TCRBV5S2A0A599 114 aa10.68□□□□□ -0.7
UFD1-209ENST00000489406 HMX3A6NHT5 357 aa10.68□□□□□ -0.7
UFD1-209ENST00000489406 M0R1X1 148 aa10.68□□□□□ -0.7
UFD1-209ENST00000489406 CST1P01037 141 aa10.68□□□□□ -0.7
UFD1-209ENST00000489406 GPR183P32249 361 aa10.68□□□□□ -0.7
UFD1-209ENST00000489406 FUSP35637 526 aaKnown RBP eCLIP10.68□□□□□ -0.7
UFD1-209ENST00000489406 CAPGP40121 348 aa10.68□□□□□ -0.7
UFD1-209ENST00000489406 EFNB1P98172 346 aa10.68□□□□□ -0.7
UFD1-209ENST00000489406 LIPKQ5VXJ0 399 aa10.68□□□□□ -0.7
UFD1-209ENST00000489406 CEACAM19Q7Z692 300 aa10.68□□□□□ -0.7
UFD1-209ENST00000489406 SLC25A42Q86VD7 318 aa10.68□□□□□ -0.7
UFD1-209ENST00000489406 FANCD2OSQ96PS1 177 aa10.68□□□□□ -0.7
UFD1-209ENST00000489406 FGFR1OP2Q9NVK5 253 aa10.68□□□□□ -0.7
UFD1-209ENST00000489406 ITGB1BP1O14713 200 aa10.67□□□□□ -0.7
UFD1-209ENST00000489406 PSMB6P28072 239 aa10.67□□□□□ -0.7
UFD1-209ENST00000489406 ZNF93P35789 620 aaPredicted RBP10.67□□□□□ -0.7
UFD1-209ENST00000489406 SOX2P48431 317 aa10.67□□□□□ -0.7
UFD1-209ENST00000489406 LEMD1Q68G75 181 aa10.67□□□□□ -0.7
UFD1-209ENST00000489406 PLET1Q6UQ28 207 aa10.67□□□□□ -0.7
UFD1-209ENST00000489406 TMEM190Q8WZ59 177 aa10.67□□□□□ -0.7
UFD1-209ENST00000489406 OR14A2Q96R54 314 aa10.67□□□□□ -0.7
UFD1-209ENST00000489406 ATG101Q9BSB4 218 aa10.67□□□□□ -0.7
UFD1-209ENST00000489406 PRRG3Q9BZD7 231 aa10.67□□□□□ -0.7
UFD1-209ENST00000489406 DAZ1Q9NQZ3 744 aaKnown RBP10.67□□□□□ -0.7
UFD1-209ENST00000489406 PTTG2Q9NZH5 202 aa10.67□□□□□ -0.7
UFD1-209ENST00000489406 ZNF221Q9UK13 617 aa10.67□□□□□ -0.7
UFD1-209ENST00000489406 TBC1D24Q9ULP9 559 aa10.67□□□□□ -0.7
UFD1-209ENST00000489406 MFSD2BA6NFX1 497 aa10.66□□□□□ -0.7
UFD1-209ENST00000489406 ZNF207O43670 478 aaKnown RBP10.66□□□□□ -0.7
UFD1-209ENST00000489406 ACTL6BO94805 426 aa10.66□□□□□ -0.7
UFD1-209ENST00000489406 ANXA8P13928 327 aa10.66□□□□□ -0.7
UFD1-209ENST00000489406 FUT3P21217 361 aa10.66□□□□□ -0.7
UFD1-209ENST00000489406 CEACAM6P40199 344 aa10.66□□□□□ -0.7
UFD1-209ENST00000489406 TAGLNQ01995 201 aaKnown RBP10.66□□□□□ -0.7
UFD1-209ENST00000489406 VMA21Q3ZAQ7 101 aa10.66□□□□□ -0.7
UFD1-209ENST00000489406 FAM98BQ52LJ0 330 aaKnown RBP10.66□□□□□ -0.7
UFD1-209ENST00000489406 DDI2Q5TDH0 399 aa10.66□□□□□ -0.7
UFD1-209ENST00000489406 MORN3Q6PF18 240 aaPredicted RBP10.66□□□□□ -0.7
UFD1-209ENST00000489406 SSX9Q7RTT3 188 aa10.66□□□□□ -0.7
UFD1-209ENST00000489406 TEX45Q8NA69 505 aa10.66□□□□□ -0.7
UFD1-209ENST00000489406 ZNRF2Q8NHG8 242 aa10.66□□□□□ -0.7
UFD1-209ENST00000489406 ZNF436Q9C0F3 470 aaPredicted RBP10.66□□□□□ -0.7
UFD1-209ENST00000489406 CLEC5AQ9NY25 188 aa10.66□□□□□ -0.7
UFD1-209ENST00000489406 OR1A1Q9P1Q5 309 aa10.66□□□□□ -0.7
UFD1-209ENST00000489406 ETV7Q9Y603 341 aa10.66□□□□□ -0.7
UFD1-209ENST00000489406 IGHV3OR16-8A0A075B7F1 116 aa10.65□□□□□ -0.7
UFD1-209ENST00000489406 TRBV7-1A0A0A6YYK4 115 aa10.65□□□□□ -0.7
UFD1-209ENST00000489406 DPPA5A6NC42 116 aa10.65□□□□□ -0.7
UFD1-209ENST00000489406 GNGT2O14610 69 aa10.65□□□□□ -0.7
UFD1-209ENST00000489406 UBE2KP61086 200 aa10.65□□□□□ -0.7
UFD1-209ENST00000489406 SIGIRRQ6IA17 410 aa10.65□□□□□ -0.7
UFD1-209ENST00000489406 GBGT1Q8N5D6 347 aa10.65□□□□□ -0.7
UFD1-209ENST00000489406 EDARADDQ8WWZ3 215 aa10.65□□□□□ -0.7
UFD1-209ENST00000489406 CMTM5Q96DZ9 223 aa10.65□□□□□ -0.7
UFD1-209ENST00000489406 RNF2Q99496 336 aa10.65□□□□□ -0.7
UFD1-209ENST00000489406 BANF2Q9H503 90 aa10.65□□□□□ -0.7
UFD1-209ENST00000489406 ZNF430Q9H8G1 570 aaPredicted RBP10.65□□□□□ -0.7
UFD1-209ENST00000489406 J3QLW9 94 aa10.64□□□□□ -0.71
UFD1-209ENST00000489406 SLC16A6O15403 523 aa10.64□□□□□ -0.71
UFD1-209ENST00000489406 CCDC22O60826 627 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms