RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 PRSS8Q16651 343 aa12□□□□□ -0.49
USP48-210ENST00000489108 C15orf32Q32M92 178 aa12□□□□□ -0.49
USP48-210ENST00000489108 TMEM177Q53S58 311 aa12□□□□□ -0.49
USP48-210ENST00000489108 APH1BQ8WW43 257 aa12□□□□□ -0.49
USP48-210ENST00000489108 SLC29A1Q99808 456 aa12□□□□□ -0.49
USP48-210ENST00000489108 NICN1Q9BSH3 213 aa12□□□□□ -0.49
USP48-210ENST00000489108 CLEC2DQ9UHP7 191 aa12□□□□□ -0.49
USP48-210ENST00000489108 TRBV6-6A0A0A6YYG2 114 aa11.99□□□□□ -0.49
USP48-210ENST00000489108 ZNF320A2RRD8 509 aa11.99□□□□□ -0.49
USP48-210ENST00000489108 TMEM213A2RRL7 107 aa11.99□□□□□ -0.49
USP48-210ENST00000489108 UBE2CO00762 179 aa11.99□□□□□ -0.49
USP48-210ENST00000489108 DCKP27707 260 aa11.99□□□□□ -0.49
USP48-210ENST00000489108 IDO2Q6ZQW0 420 aa11.99□□□□□ -0.49
USP48-210ENST00000489108 TEX45Q8NA69 505 aa11.99□□□□□ -0.49
USP48-210ENST00000489108 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.99□□□□□ -0.49
USP48-210ENST00000489108 ACOT12Q8WYK0 555 aa11.99□□□□□ -0.49
USP48-210ENST00000489108 DERL3Q96Q80 235 aa11.99□□□□□ -0.49
USP48-210ENST00000489108 RIMS4Q9H426 269 aaPredicted RBP11.99□□□□□ -0.49
USP48-210ENST00000489108 PLEKHJ1Q9NW61 149 aa11.99□□□□□ -0.49
USP48-210ENST00000489108 RDH8Q9NYR8 311 aa11.99□□□□□ -0.49
USP48-210ENST00000489108 AK3Q9UIJ7 227 aa11.99□□□□□ -0.49
USP48-210ENST00000489108 IGKV1-6A0A0C4DH72 117 aa11.98□□□□□ -0.49
USP48-210ENST00000489108 IGHV3-23P01764 117 aa11.98□□□□□ -0.49
USP48-210ENST00000489108 MED14OSP0DP75 135 aa11.98□□□□□ -0.49
USP48-210ENST00000489108 FAM209BQ5JX69 171 aa11.98□□□□□ -0.49
USP48-210ENST00000489108 BTNL8Q6UX41 500 aa11.98□□□□□ -0.49
USP48-210ENST00000489108 TTC9CQ8N5M4 171 aa11.98□□□□□ -0.49
USP48-210ENST00000489108 NKAIN3Q8N8D7 197 aa11.98□□□□□ -0.49
USP48-210ENST00000489108 TMEM59Q9BXS4 323 aa11.98□□□□□ -0.49
USP48-210ENST00000489108 KCNK15Q9H427 330 aa11.98□□□□□ -0.49
USP48-210ENST00000489108 Q9N2K0 584 aa11.98□□□□□ -0.49
USP48-210ENST00000489108 SDHAF2Q9NX18 166 aa11.98□□□□□ -0.49
USP48-210ENST00000489108 UBQLN2Q9UHD9 624 aa11.98□□□□□ -0.49
USP48-210ENST00000489108 FAT2Q9NYQ8 4349 aa11.97□□□□□ -0.49
USP48-210ENST00000489108 A0A0A6YYD4 124 aa11.97□□□□□ -0.49
USP48-210ENST00000489108 PNMA8CA0A1B0GUJ8 204 aa11.97□□□□□ -0.49
USP48-210ENST00000489108 UBBP0CG47 229 aa11.97□□□□□ -0.49
USP48-210ENST00000489108 NANOS2P60321 138 aaKnown RBP11.97□□□□□ -0.49
USP48-210ENST00000489108 UBE2KP61086 200 aa11.97□□□□□ -0.49
USP48-210ENST00000489108 CBX3Q13185 183 aa11.97□□□□□ -0.49
USP48-210ENST00000489108 VMA21Q3ZAQ7 101 aa11.97□□□□□ -0.49
USP48-210ENST00000489108 FAM106AQ4KMX7 169 aa11.97□□□□□ -0.49
USP48-210ENST00000489108 CLEC19AQ6UXS0 136 aa11.97□□□□□ -0.49
USP48-210ENST00000489108 CBR4Q8N4T8 237 aa11.97□□□□□ -0.49
USP48-210ENST00000489108 STPG3Q8N7X2 389 aa11.97□□□□□ -0.49
USP48-210ENST00000489108 OR1L6Q8NGR2 347 aa11.97□□□□□ -0.49
USP48-210ENST00000489108 TM2D1Q9BX74 207 aa11.97□□□□□ -0.49
USP48-210ENST00000489108 FBXL7Q9UJT9 491 aa11.97□□□□□ -0.49
USP48-210ENST00000489108 S4R3C0 116 aa11.97□□□□□ -0.49
USP48-210ENST00000489108 ABCA13Q86UQ4 5058 aa11.97□□□□□ -0.49
USP48-210ENST00000489108 PKHD1P08F94 4074 aa11.97□□□□□ -0.49
USP48-210ENST00000489108 TRAV25A0A0B4J276 109 aa11.96□□□□□ -0.49
USP48-210ENST00000489108 LOC100130705A0A1B0GUX0 176 aa11.96□□□□□ -0.49
USP48-210ENST00000489108 WBP4O75554 376 aaKnown RBP11.96□□□□□ -0.49
USP48-210ENST00000489108 ARL3P36405 182 aa11.96□□□□□ -0.49
USP48-210ENST00000489108 UNC119Q13432 240 aa11.96□□□□□ -0.49
USP48-210ENST00000489108 C10orf55Q5SWW7 151 aa11.96□□□□□ -0.49
USP48-210ENST00000489108 RBPMS2Q6ZRY4 209 aaKnown RBP11.96□□□□□ -0.49
USP48-210ENST00000489108 C19orf35Q6ZS72 473 aa11.96□□□□□ -0.49
USP48-210ENST00000489108 OR2C3Q8N628 320 aa11.96□□□□□ -0.49
USP48-210ENST00000489108 PYDC1Q8WXC3 89 aa11.96□□□□□ -0.49
USP48-210ENST00000489108 C5orf30Q96GV9 206 aa11.96□□□□□ -0.49
USP48-210ENST00000489108 SPIN2AQ99865 258 aa11.96□□□□□ -0.49
USP48-210ENST00000489108 SPIN2BQ9BPZ2 258 aa11.96□□□□□ -0.49
USP48-210ENST00000489108 OR2D2Q9H210 308 aa11.96□□□□□ -0.49
USP48-210ENST00000489108 ZNF430Q9H8G1 570 aaPredicted RBP11.96□□□□□ -0.49
USP48-210ENST00000489108 FBXL17Q9UF56 701 aa11.96□□□□□ -0.49
USP48-210ENST00000489108 MGAT4AQ9UM21 535 aa11.96□□□□□ -0.49
USP48-210ENST00000489108 DNAH2Q9P225 4427 aa11.96□□□□□ -0.5
USP48-210ENST00000489108 DYNC1H1Q14204 4646 aaKnown RBP11.95□□□□□ -0.5
USP48-210ENST00000489108 KIR2DL5BA0A0G2JN68 375 aa11.95□□□□□ -0.5
USP48-210ENST00000489108 KIR2DL5BA0A0G2JPC4 375 aa11.95□□□□□ -0.5
USP48-210ENST00000489108 A0A1B0GVY2 172 aa11.95□□□□□ -0.5
USP48-210ENST00000489108 A8MWP6 167 aa11.95□□□□□ -0.5
USP48-210ENST00000489108 SOCS1O15524 211 aa11.95□□□□□ -0.5
USP48-210ENST00000489108 IFNA4P05014 189 aa11.95□□□□□ -0.5
USP48-210ENST00000489108 CD3GP09693 182 aa11.95□□□□□ -0.5
USP48-210ENST00000489108 CTRB1P17538 263 aa11.95□□□□□ -0.5
USP48-210ENST00000489108 RPL35AP18077 110 aaKnown RBP11.95□□□□□ -0.5
USP48-210ENST00000489108 MYL12AP19105 171 aa11.95□□□□□ -0.5
USP48-210ENST00000489108 MAP2K4P45985 399 aa11.95□□□□□ -0.5
USP48-210ENST00000489108 TAGLNQ01995 201 aaKnown RBP11.95□□□□□ -0.5
USP48-210ENST00000489108 RTL8BQ17RB0 113 aa11.95□□□□□ -0.5
USP48-210ENST00000489108 CTRB2Q6GPI1 263 aa11.95□□□□□ -0.5
USP48-210ENST00000489108 SLC38A6Q8IZM9 456 aa11.95□□□□□ -0.5
USP48-210ENST00000489108 KIR2DL5AQ8N109 375 aa11.95□□□□□ -0.5
USP48-210ENST00000489108 ZNF485Q8NCK3 441 aa11.95□□□□□ -0.5
USP48-210ENST00000489108 KIR2DL5BQ8NHK3 375 aa11.95□□□□□ -0.5
USP48-210ENST00000489108 FBLIM1Q8WUP2 373 aa11.95□□□□□ -0.5
USP48-210ENST00000489108 GGHQ92820 318 aa11.95□□□□□ -0.5
USP48-210ENST00000489108 CCDC140Q96MF4 163 aa11.95□□□□□ -0.5
USP48-210ENST00000489108 KRTAP4-5Q9BYR2 181 aa11.95□□□□□ -0.5
USP48-210ENST00000489108 DNAH17Q9UFH2 4485 aa11.94□□□□□ -0.5
USP48-210ENST00000489108 HMX3A6NHT5 357 aa11.94□□□□□ -0.5
USP48-210ENST00000489108 ACTL6BO94805 426 aa11.94□□□□□ -0.5
USP48-210ENST00000489108 CRYZL1O95825 349 aa11.94□□□□□ -0.5
USP48-210ENST00000489108 RRASP10301 218 aa11.94□□□□□ -0.5
USP48-210ENST00000489108 ZNF585BQ52M93 769 aa11.94□□□□□ -0.5
USP48-210ENST00000489108 OR4A47Q6IF82 309 aa11.94□□□□□ -0.5
USP48-210ENST00000489108 LINC00336Q6ZUF6 198 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms