RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 CTF1Q16619 201 aa11.18□□□□□ -0.62
BRCA1-218ENST00000489037 SAMD5Q5TGI4 173 aa11.18□□□□□ -0.62
BRCA1-218ENST00000489037 UNQ5815/PRO19632Q6UWF5 114 aa11.18□□□□□ -0.62
BRCA1-218ENST00000489037 LCNL1Q6ZST4 164 aa11.18□□□□□ -0.62
BRCA1-218ENST00000489037 SECTM1Q8WVN6 248 aa11.18□□□□□ -0.62
BRCA1-218ENST00000489037 TCTEX1D2Q8WW35 142 aa11.18□□□□□ -0.62
BRCA1-218ENST00000489037 ARPC1AQ92747 370 aa11.18□□□□□ -0.62
BRCA1-218ENST00000489037 C5orf30Q96GV9 206 aa11.18□□□□□ -0.62
BRCA1-218ENST00000489037 RCC1LQ96I51 464 aaKnown RBP11.18□□□□□ -0.62
BRCA1-218ENST00000489037 GPR61Q9BZJ8 451 aa11.18□□□□□ -0.62
BRCA1-218ENST00000489037 FOXA2Q9Y261 457 aaPredicted RBP11.18□□□□□ -0.62
BRCA1-218ENST00000489037 TNCP24821 2201 aa11.18□□□□□ -0.62
BRCA1-218ENST00000489037 IGKV1D-13A0A0B4J2D9 117 aa11.17□□□□□ -0.62
BRCA1-218ENST00000489037 LINC00473A8K010 186 aa11.17□□□□□ -0.62
BRCA1-218ENST00000489037 CCL24O00175 119 aa11.17□□□□□ -0.62
BRCA1-218ENST00000489037 CREBL2O60519 120 aaPredicted RBP11.17□□□□□ -0.62
BRCA1-218ENST00000489037 HPGDSO60760 199 aa11.17□□□□□ -0.62
BRCA1-218ENST00000489037 NOL3O60936 208 aaKnown RBP11.17□□□□□ -0.62
BRCA1-218ENST00000489037 FCGR3BO75015 233 aa11.17□□□□□ -0.62
BRCA1-218ENST00000489037 PPYP01298 95 aa11.17□□□□□ -0.62
BRCA1-218ENST00000489037 IGKV1-13P0DP09 117 aa11.17□□□□□ -0.62
BRCA1-218ENST00000489037 AADACP22760 399 aa11.17□□□□□ -0.62
BRCA1-218ENST00000489037 CRIP2P52943 208 aaPredicted RBP11.17□□□□□ -0.62
BRCA1-218ENST00000489037 RAB25P57735 213 aa11.17□□□□□ -0.62
BRCA1-218ENST00000489037 TAS2R46P59540 309 aa11.17□□□□□ -0.62
BRCA1-218ENST00000489037 MSMO1Q15800 293 aa11.17□□□□□ -0.62
BRCA1-218ENST00000489037 AKIRIN2Q53H80 203 aa11.17□□□□□ -0.62
BRCA1-218ENST00000489037 ACTBL2Q562R1 376 aa11.17□□□□□ -0.62
BRCA1-218ENST00000489037 OXLD1Q5BKU9 147 aa11.17□□□□□ -0.62
BRCA1-218ENST00000489037 PYHIN1Q6K0P9 492 aa11.17□□□□□ -0.62
BRCA1-218ENST00000489037 ZNF66Q6ZN08 573 aa11.17□□□□□ -0.62
BRCA1-218ENST00000489037 C18orf65Q6ZTR6 163 aa11.17□□□□□ -0.62
BRCA1-218ENST00000489037 TEX45Q8NA69 505 aa11.17□□□□□ -0.62
BRCA1-218ENST00000489037 MINDY2Q8NBR6 621 aa11.17□□□□□ -0.62
BRCA1-218ENST00000489037 ZBTB34Q8NCN2 500 aa11.17□□□□□ -0.62
BRCA1-218ENST00000489037 OR5M8Q8NGP6 311 aa11.17□□□□□ -0.62
BRCA1-218ENST00000489037 OR5H2Q8NGV7 314 aa11.17□□□□□ -0.62
BRCA1-218ENST00000489037 GRPEL2Q8TAA5 225 aa11.17□□□□□ -0.62
BRCA1-218ENST00000489037 GIMAP1Q8WWP7 306 aa11.17□□□□□ -0.62
BRCA1-218ENST00000489037 DDB2Q92466 427 aa11.17□□□□□ -0.62
BRCA1-218ENST00000489037 BORCS5Q969J3 196 aa11.17□□□□□ -0.62
BRCA1-218ENST00000489037 UBE2E2Q96LR5 201 aa11.17□□□□□ -0.62
BRCA1-218ENST00000489037 MCRIP2Q9BUT9 160 aaKnown RBP11.17□□□□□ -0.62
BRCA1-218ENST00000489037 SLC5A7Q9GZV3 580 aa11.17□□□□□ -0.62
BRCA1-218ENST00000489037 EHFQ9NZC4 300 aa11.17□□□□□ -0.62
BRCA1-218ENST00000489037 VSIG4Q9Y279 399 aa11.17□□□□□ -0.62
BRCA1-218ENST00000489037 NUBP2Q9Y5Y2 271 aa11.17□□□□□ -0.62
BRCA1-218ENST00000489037 ACTL6BO94805 426 aa11.16□□□□□ -0.62
BRCA1-218ENST00000489037 IGLV1-40P01703 118 aa11.16□□□□□ -0.62
BRCA1-218ENST00000489037 IGLV2-23P01705 113 aa11.16□□□□□ -0.62
BRCA1-218ENST00000489037 IGLL1P15814 213 aa11.16□□□□□ -0.62
BRCA1-218ENST00000489037 KIR2DS2P43631 304 aa11.16□□□□□ -0.62
BRCA1-218ENST00000489037 RAB9AP51151 201 aa11.16□□□□□ -0.62
BRCA1-218ENST00000489037 FXYD4P59646 89 aa11.16□□□□□ -0.62
BRCA1-218ENST00000489037 UBE2KP61086 200 aa11.16□□□□□ -0.62
BRCA1-218ENST00000489037 NDPQ00604 133 aa11.16□□□□□ -0.62
BRCA1-218ENST00000489037 BEAN1Q3B7T3 259 aa11.16□□□□□ -0.62
BRCA1-218ENST00000489037 SNX29P2Q8IUI4 249 aa11.16□□□□□ -0.62
BRCA1-218ENST00000489037 CLVS1Q8IUQ0 354 aaPredicted RBP11.16□□□□□ -0.62
BRCA1-218ENST00000489037 MRPL41Q8IXM3 137 aaKnown RBP11.16□□□□□ -0.62
BRCA1-218ENST00000489037 MFSD4AQ8N468 514 aa11.16□□□□□ -0.62
BRCA1-218ENST00000489037 LINC00482Q8N8I6 264 aa11.16□□□□□ -0.62
BRCA1-218ENST00000489037 LFNGQ8NES3 379 aa11.16□□□□□ -0.62
BRCA1-218ENST00000489037 OR4S2Q8NH73 311 aa11.16□□□□□ -0.62
BRCA1-218ENST00000489037 C4orf3Q8WVX3 66 aa11.16□□□□□ -0.62
BRCA1-218ENST00000489037 DPF1Q92782 380 aa11.16□□□□□ -0.62
BRCA1-218ENST00000489037 SNAPC3Q92966 411 aa11.16□□□□□ -0.62
BRCA1-218ENST00000489037 TMEM68Q96MH6 324 aa11.16□□□□□ -0.62
BRCA1-218ENST00000489037 FAM103A1Q9BTL3 118 aaKnown RBP11.16□□□□□ -0.62
BRCA1-218ENST00000489037 SCPEP1Q9HB40 452 aa11.16□□□□□ -0.62
BRCA1-218ENST00000489037 CCL28Q9NRJ3 127 aa11.16□□□□□ -0.62
BRCA1-218ENST00000489037 TAS2R8Q9NYW2 309 aa11.16□□□□□ -0.62
BRCA1-218ENST00000489037 FBXO7Q9Y3I1 522 aa11.16□□□□□ -0.62
BRCA1-218ENST00000489037 ELK1P19419 428 aa11.15□□□□□ -0.62
BRCA1-218ENST00000489037 RPL5P46777 297 aaKnown RBP11.15□□□□□ -0.62
BRCA1-218ENST00000489037 CATR1Q13166 79 aa11.15□□□□□ -0.62
BRCA1-218ENST00000489037 PDLIM3Q53GG5 364 aaPredicted RBP11.15□□□□□ -0.62
BRCA1-218ENST00000489037 OR2B11Q5JQS5 317 aa11.15□□□□□ -0.62
BRCA1-218ENST00000489037 ETV3LQ6ZN32 361 aa11.15□□□□□ -0.62
BRCA1-218ENST00000489037 OVCH2Q7RTZ1 564 aa11.15□□□□□ -0.62
BRCA1-218ENST00000489037 ZNF491Q8N8L2 437 aa11.15□□□□□ -0.62
BRCA1-218ENST00000489037 RAB2BQ8WUD1 216 aa11.15□□□□□ -0.62
BRCA1-218ENST00000489037 C15orf40Q8WUR7 153 aa11.15□□□□□ -0.62
BRCA1-218ENST00000489037 RAX2Q96IS3 184 aa11.15□□□□□ -0.62
BRCA1-218ENST00000489037 PHB2Q99623 299 aa11.15□□□□□ -0.62
BRCA1-218ENST00000489037 AIFM2Q9BRQ8 373 aa11.15□□□□□ -0.62
BRCA1-218ENST00000489037 KLK15Q9H2R5 256 aa11.15□□□□□ -0.62
BRCA1-218ENST00000489037 TPSG1Q9NRR2 321 aa11.15□□□□□ -0.62
BRCA1-218ENST00000489037 ZNF355PQ9NSJ1 428 aa11.15□□□□□ -0.62
BRCA1-218ENST00000489037 SRRM4A7MD48 611 aaKnown RBP11.14□□□□□ -0.63
BRCA1-218ENST00000489037 SULT1C2O00338 296 aa11.14□□□□□ -0.63
BRCA1-218ENST00000489037 WIPF1O43516 503 aa11.14□□□□□ -0.63
BRCA1-218ENST00000489037 HRASP01112 189 aa11.14□□□□□ -0.63
BRCA1-218ENST00000489037 IGLV2-14P01704 120 aa11.14□□□□□ -0.63
BRCA1-218ENST00000489037 PMP2P02689 132 aa11.14□□□□□ -0.63
BRCA1-218ENST00000489037 CRYGBP07316 175 aa11.14□□□□□ -0.63
BRCA1-218ENST00000489037 EGR2P11161 476 aaPredicted RBP11.14□□□□□ -0.63
BRCA1-218ENST00000489037 NAT1P18440 290 aa11.14□□□□□ -0.63
BRCA1-218ENST00000489037 RFX2P48378 723 aa11.14□□□□□ -0.63
BRCA1-218ENST00000489037 RPL30P62888 115 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms